RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 MYOZ3Q8TDC0 251 aa0.69□□□□□ -2.3
XRCC4-202ENST00000338635 CYP4F30PQ9H0H9 118 aa0.69□□□□□ -2.3
XRCC4-202ENST00000338635 RBBP6Q7Z6E9 1792 aaKnown RBP0.69□□□□□ -2.3
XRCC4-202ENST00000338635 KDM6BO15054 1643 aa0.69□□□□□ -2.3
XRCC4-202ENST00000338635 CDK12Q9NYV4 1490 aaPredicted RBP0.69□□□□□ -2.3
XRCC4-202ENST00000338635 ESPL1Q14674 2120 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 CTTNBP2Q8WZ74 1663 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 QRICH2Q9H0J4 1663 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 ZFYVE16Q7Z3T8 1539 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 MED12Q93074 2177 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 MED13Q9UHV7 2174 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 BCORL1Q5H9F3 1711 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 MACF1Q9UPN3 7388 aaKnown RBP0.68□□□□□ -2.3
XRCC4-202ENST00000338635 CPSF1Q10570 1443 aaKnown RBP0.68□□□□□ -2.3
XRCC4-202ENST00000338635 LAMB1P07942 1786 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 RBAKDNA6NC62 111 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 UBE2D1P51668 147 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 CAV3P56539 151 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 SSBP1Q04837 148 aaKnown RBP0.68□□□□□ -2.3
XRCC4-202ENST00000338635 ZNF56Q15929 161 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 COL5A1-AS1Q5SY13 56 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 C20orf197Q8N268 126 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 C5orf56Q8N8D9 126 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 LINC00208Q96KT6 92 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 AP4S1Q9Y587 144 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 LINC00312Q9Y6C7 94 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 ASCC3Q8N3C0 2202 aaKnown RBP0.68□□□□□ -2.3
XRCC4-202ENST00000338635 NCOA6Q14686 2063 aaPredicted RBP0.68□□□□□ -2.3
XRCC4-202ENST00000338635 ABCA4P78363 2273 aa0.68□□□□□ -2.3
XRCC4-202ENST00000338635 MUC22E2RYF6 1773 aaPredicted RBP0.67□□□□□ -2.3
XRCC4-202ENST00000338635 DLEC1Q9Y238 1755 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 TECTAO75443 2155 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 BLMP54132 1417 aaPredicted RBP0.67□□□□□ -2.3
XRCC4-202ENST00000338635 TRBV7-1A0A0A6YYK4 115 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 TRBV30A0A0K0K1B3 111 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 FXYD1O00168 92 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 LINC00032P0C843 101 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 CCL3L1P16619 93 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 SNCAP37840 140 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 KLKP1Q107X0 134 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 C10orf128Q5T292 105 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 LINC00575Q6W349 94 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 Q86TA4 180 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 COX7B2Q8TF08 81 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 CCL19Q99731 98 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 DPY30Q9C005 99 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 COL4A1P02462 1669 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 PRRC2BQ5JSZ5 2229 aaKnown RBP0.67□□□□□ -2.3
XRCC4-202ENST00000338635 C10orf71Q711Q0 1435 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 CACNA1BQ00975 2339 aa0.67□□□□□ -2.3
XRCC4-202ENST00000338635 ZNF142P52746 1687 aaPredicted RBP0.67□□□□□ -2.3
XRCC4-202ENST00000338635 DLG5Q8TDM6 1919 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 A0A1W2PPM0 123 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 MPC2O95563 127 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 EFNA4P52798 201 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 ELOF1P60002 83 aaKnown RBP0.66□□□□□ -2.3
XRCC4-202ENST00000338635 KRTDAPP60985 99 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 KRTAP21-3Q3LHN1 58 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 SCP2D1Q9UJQ7 156 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 V9GYV3 84 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 PHRF1Q9P1Y6 1649 aaKnown RBP0.66□□□□□ -2.3
XRCC4-202ENST00000338635 MYH8P13535 1937 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 ZNF609O15014 1411 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 PPIP5K1Q6PFW1 1433 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 CASKIN1Q8WXD9 1431 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 AFDNP55196 1824 aaKnown RBP0.66□□□□□ -2.3
XRCC4-202ENST00000338635 NAP1L6A6NFF2 107 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 ANGP03950 147 aaKnown RBP0.66□□□□□ -2.3
XRCC4-202ENST00000338635 LYNX1P0DP58 116 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 GNG2P59768 71 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 GNG11P61952 73 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 C10orf99Q6UWK7 81 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 SNHG12Q9BXW3 62 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 Q9H521 79 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 TMEM14BQ9NUH8 114 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 LINC00474Q9P2X8 69 aa0.66□□□□□ -2.3
XRCC4-202ENST00000338635 RREB1Q92766 1687 aa0.65□□□□□ -2.3
XRCC4-202ENST00000338635 ARAP2Q8WZ64 1704 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 NWD2Q9ULI1 1742 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 SCAPERQ9BY12 1400 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 ABCC10Q5T3U5 1492 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 PATJQ8NI35 1801 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 ARHGAP5Q13017 1502 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 TRBV7-3A0A075B6L6 115 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.65□□□□□ -2.31
XRCC4-202ENST00000338635 PVALEFA0A1B0GWK0 134 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 CLPSL1A2RUU4 121 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 GNGT2O14610 69 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 EDDM3BP56851 147 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 UBA52P62987 128 aaKnown RBP0.65□□□□□ -2.31
XRCC4-202ENST00000338635 MGST2Q99735 147 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 FLG2Q5D862 2391 aaPredicted RBP0.65□□□□□ -2.31
XRCC4-202ENST00000338635 E9PCH4 1651 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 ROBO1Q9Y6N7 1651 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 PEAK1Q9H792 1746 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 TNS1Q9HBL0 1735 aaKnown RBP0.65□□□□□ -2.31
XRCC4-202ENST00000338635 NRXN2Q9P2S2 1712 aa0.65□□□□□ -2.31
XRCC4-202ENST00000338635 PARP14Q460N5 1801 aa0.64□□□□□ -2.31
XRCC4-202ENST00000338635 NSD3Q9BZ95 1437 aa0.64□□□□□ -2.31
XRCC4-202ENST00000338635 DOCK1Q14185 1865 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms