RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 GAGE4Q13068 117 aa14.14□□□□□ -0.15
MRPL40-201ENST00000333130 GAGE5Q13069 117 aa14.14□□□□□ -0.15
MRPL40-201ENST00000333130 GAGE13Q4V321 117 aa14.14□□□□□ -0.15
MRPL40-201ENST00000333130 Q9UF83 564 aa14.14□□□□□ -0.15
MRPL40-201ENST00000333130 TIRAPP58753 221 aa14.13□□□□□ -0.15
MRPL40-201ENST00000333130 SUMO4Q6EEV6 95 aa14.13□□□□□ -0.15
MRPL40-201ENST00000333130 GATD1Q8NB37 220 aa14.13□□□□□ -0.15
MRPL40-201ENST00000333130 Q9H8V8 135 aa14.13□□□□□ -0.15
MRPL40-201ENST00000333130 RPS10P5Q9NQ39 176 aa14.13□□□□□ -0.15
MRPL40-201ENST00000333130 RYR3Q15413 4870 aa14.13□□□□□ -0.15
MRPL40-201ENST00000333130 M0QY20 66 aa14.12□□□□□ -0.15
MRPL40-201ENST00000333130 HBBP68871 147 aa14.12□□□□□ -0.15
MRPL40-201ENST00000333130 TTC32Q5I0X7 151 aa14.12□□□□□ -0.15
MRPL40-201ENST00000333130 MRPL54Q6P161 138 aaKnown RBP14.12□□□□□ -0.15
MRPL40-201ENST00000333130 GTSF1LQ9H1H1 148 aa14.12□□□□□ -0.15
MRPL40-201ENST00000333130 KCNIP4Q6PIL6 250 aa14.11□□□□□ -0.15
MRPL40-201ENST00000333130 BTF3L4Q96K17 158 aa14.11□□□□□ -0.15
MRPL40-201ENST00000333130 HYDINQ4G0P3 5121 aa14.11□□□□□ -0.15
MRPL40-201ENST00000333130 TRBV7-3A0A075B6L6 115 aa14.1□□□□□ -0.15
MRPL40-201ENST00000333130 TRAV9-1A0A075B6T8 112 aa14.1□□□□□ -0.15
MRPL40-201ENST00000333130 M0R2N4 97 aa14.1□□□□□ -0.15
MRPL40-201ENST00000333130 SIVA1O15304 175 aa14.1□□□□□ -0.15
MRPL40-201ENST00000333130 S100A8P05109 93 aa14.1□□□□□ -0.15
MRPL40-201ENST00000333130 FRZBQ92765 325 aa14.1□□□□□ -0.15
MRPL40-201ENST00000333130 TRAV8-6A0A0B4J262 113 aa14.09□□□□□ -0.15
MRPL40-201ENST00000333130 CAMPP49913 170 aa14.09□□□□□ -0.15
MRPL40-201ENST00000333130 NEXN-AS1Q8NBZ9 246 aa14.09□□□□□ -0.15
MRPL40-201ENST00000333130 RNF185Q96GF1 192 aa14.09□□□□□ -0.15
MRPL40-201ENST00000333130 NBDYA0A0U1RRE5 68 aa14.09□□□□□ -0.15
MRPL40-201ENST00000333130 OR10J3Q5JRS4 329 aa14.09□□□□□ -0.15
MRPL40-201ENST00000333130 AMN1Q8IY45 258 aa14.09□□□□□ -0.15
MRPL40-201ENST00000333130 RAB4AP20338 218 aa14.08□□□□□ -0.16
MRPL40-201ENST00000333130 LELP1Q5T871 98 aa14.08□□□□□ -0.16
MRPL40-201ENST00000333130 RASL11AQ6T310 242 aa14.08□□□□□ -0.16
MRPL40-201ENST00000333130 TRAV26-2A0A0B4J265 109 aa14.07□□□□□ -0.16
MRPL40-201ENST00000333130 S100PP25815 95 aa14.07□□□□□ -0.16
MRPL40-201ENST00000333130 UBE2D3P61077 147 aa14.07□□□□□ -0.16
MRPL40-201ENST00000333130 UBE2D2P62837 147 aa14.07□□□□□ -0.16
MRPL40-201ENST00000333130 FAM104BQ5XKR9 115 aa14.07□□□□□ -0.16
MRPL40-201ENST00000333130 DNAJC30Q96LL9 226 aa14.07□□□□□ -0.16
MRPL40-201ENST00000333130 TNFRSF18Q9Y5U5 241 aa14.07□□□□□ -0.16
MRPL40-201ENST00000333130 TRAV9-2A0A087WT02 112 aa14.06□□□□□ -0.16
MRPL40-201ENST00000333130 ATRAIDQ6UW56 229 aa14.06□□□□□ -0.16
MRPL40-201ENST00000333130 MRAP2Q96G30 205 aa14.06□□□□□ -0.16
MRPL40-201ENST00000333130 URGCP-MRPS24S4R325 110 aa14.06□□□□□ -0.16
MRPL40-201ENST00000333130 Q6ZR54 194 aa14.05□□□□□ -0.16
MRPL40-201ENST00000333130 NIT2Q9NQR4 276 aa14.05□□□□□ -0.16
MRPL40-201ENST00000333130 K7EP13 123 aa14.04□□□□□ -0.16
MRPL40-201ENST00000333130 MRPL51Q4U2R6 128 aaKnown RBP14.03□□□□□ -0.16
MRPL40-201ENST00000333130 TMEM97Q5BJF2 176 aa14.03□□□□□ -0.16
MRPL40-201ENST00000333130 DAZ4Q86SG3 579 aaKnown RBP14.03□□□□□ -0.16
MRPL40-201ENST00000333130 WFDC10BQ8IUB3 73 aa14.03□□□□□ -0.16
MRPL40-201ENST00000333130 DAZ3Q9NR90 486 aaKnown RBP14.03□□□□□ -0.16
MRPL40-201ENST00000333130 IGHV3-38A0A0C4DH36 116 aa14.02□□□□□ -0.17
MRPL40-201ENST00000333130 C1orf134Q5TEV5 83 aa14.02□□□□□ -0.17
MRPL40-201ENST00000333130 GAS8-AS1O95177 125 aa14.01□□□□□ -0.17
MRPL40-201ENST00000333130 C10orf126Q8N4M7 172 aa14.01□□□□□ -0.17
MRPL40-201ENST00000333130 RPL39LQ96EH5 51 aaKnown RBP14.01□□□□□ -0.17
MRPL40-201ENST00000333130 TRBV6-5A0A0K0K1A5 114 aa14□□□□□ -0.17
MRPL40-201ENST00000333130 DNAH10OSP0CZ25 163 aa14□□□□□ -0.17
MRPL40-201ENST00000333130 ELOBQ15370 118 aa14□□□□□ -0.17
MRPL40-201ENST00000333130 BTF3P20290 206 aaKnown RBP13.99□□□□□ -0.17
MRPL40-201ENST00000333130 RPS10P46783 165 aaKnown RBP13.99□□□□□ -0.17
MRPL40-201ENST00000333130 TMEM136Q6ZRR5 245 aa13.99□□□□□ -0.17
MRPL40-201ENST00000333130 YPEL4Q96NS1 127 aa13.99□□□□□ -0.17
MRPL40-201ENST00000333130 TRBV24-1A0A075B6N3 115 aa13.98□□□□□ -0.17
MRPL40-201ENST00000333130 NCR2O95944 276 aa13.98□□□□□ -0.17
MRPL40-201ENST00000333130 LINC01556Q5JQF7 62 aa13.98□□□□□ -0.17
MRPL40-201ENST00000333130 C6orf223Q8N319 242 aa13.98□□□□□ -0.17
MRPL40-201ENST00000333130 NRACQ8N912 160 aa13.98□□□□□ -0.17
MRPL40-201ENST00000333130 SMKR1H3BMG3 65 aa13.97□□□□□ -0.17
MRPL40-201ENST00000333130 PPP1R17O96001 155 aa13.97□□□□□ -0.17
MRPL40-201ENST00000333130 LINC00336Q6ZUF6 198 aa13.97□□□□□ -0.17
MRPL40-201ENST00000333130 TRBV6-8A0A0A6YYG3 113 aa13.96□□□□□ -0.17
MRPL40-201ENST00000333130 PPBPP02775 128 aa13.96□□□□□ -0.17
MRPL40-201ENST00000333130 PKIAP61925 76 aa13.96□□□□□ -0.17
MRPL40-201ENST00000333130 COX19Q49B96 90 aa13.96□□□□□ -0.17
MRPL40-201ENST00000333130 GNB1LQ9BYB4 327 aa13.96□□□□□ -0.17
MRPL40-201ENST00000333130 TGIF2-C20orf24A0A0A6YYL0 155 aa13.96□□□□□ -0.18
MRPL40-201ENST00000333130 D6R8Y8 96 aa13.96□□□□□ -0.18
MRPL40-201ENST00000333130 CKS2P33552 79 aa13.96□□□□□ -0.18
MRPL40-201ENST00000333130 SMCO4Q9NRQ5 59 aa13.96□□□□□ -0.18
MRPL40-201ENST00000333130 TRBV25-1A0A075B6N4 114 aa13.95□□□□□ -0.18
MRPL40-201ENST00000333130 SDHAF1A6NFY7 115 aa13.95□□□□□ -0.18
MRPL40-201ENST00000333130 HLA-DQA1P01909 254 aa13.95□□□□□ -0.18
MRPL40-201ENST00000333130 CBLN2Q8IUK8 224 aa13.95□□□□□ -0.18
MRPL40-201ENST00000333130 A0A087WX48 190 aa13.94□□□□□ -0.18
MRPL40-201ENST00000333130 NFE4Q86UQ8 179 aa13.94□□□□□ -0.18
MRPL40-201ENST00000333130 ORMDL3Q8N138 153 aa13.94□□□□□ -0.18
MRPL40-201ENST00000333130 TMEM70Q9BUB7 260 aa13.94□□□□□ -0.18
MRPL40-201ENST00000333130 KRTAP1-5Q9BYS1 174 aa13.94□□□□□ -0.18
MRPL40-201ENST00000333130 ST20Q9HBF5 79 aa13.94□□□□□ -0.18
MRPL40-201ENST00000333130 PHOX2AO14813 284 aa13.93□□□□□ -0.18
MRPL40-201ENST00000333130 IGHV3-30P01768 117 aa13.93□□□□□ -0.18
MRPL40-201ENST00000333130 IGHV3-33P01772 117 aa13.93□□□□□ -0.18
MRPL40-201ENST00000333130 MT-ND6P03923 174 aa13.93□□□□□ -0.18
MRPL40-201ENST00000333130 IGHV3-30-3P0DP02 117 aa13.93□□□□□ -0.18
MRPL40-201ENST00000333130 IGHV3-30-5P0DP03 117 aa13.93□□□□□ -0.18
MRPL40-201ENST00000333130 POLR2KP53803 58 aaKnown RBP13.93□□□□□ -0.18
MRPL40-201ENST00000333130 COTL1Q14019 142 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms