RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 TEX49A0A1B0GTD5 131 aa13.56□□□□□ -0.24
CLSTN3-202ENST00000331148 MUSTN1Q8IVN3 82 aa13.56□□□□□ -0.24
CLSTN3-202ENST00000331148 WNK2Q9Y3S1 2297 aa13.55□□□□□ -0.24
CLSTN3-202ENST00000331148 VCYO14598 125 aa13.55□□□□□ -0.24
CLSTN3-202ENST00000331148 OVOL1O14753 267 aa13.55□□□□□ -0.24
CLSTN3-202ENST00000331148 LEPROTO15243 131 aa13.55□□□□□ -0.24
CLSTN3-202ENST00000331148 ATP5J2P56134 94 aa13.55□□□□□ -0.24
CLSTN3-202ENST00000331148 Q1RN00 199 aa13.55□□□□□ -0.24
CLSTN3-202ENST00000331148 SUMO4Q6EEV6 95 aa13.55□□□□□ -0.24
CLSTN3-202ENST00000331148 FAM110AQ9BQ89 295 aa13.55□□□□□ -0.24
CLSTN3-202ENST00000331148 PIMREGQ9BSJ6 248 aa13.55□□□□□ -0.24
CLSTN3-202ENST00000331148 C15orf53Q8NAA6 179 aa13.54□□□□□ -0.24
CLSTN3-202ENST00000331148 FAM19A4Q96LR4 140 aa13.54□□□□□ -0.24
CLSTN3-202ENST00000331148 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.53□□□□□ -0.24
CLSTN3-202ENST00000331148 TRBV10-2A0A0K0K1G8 114 aa13.53□□□□□ -0.24
CLSTN3-202ENST00000331148 TMEM223A0PJW6 202 aa13.53□□□□□ -0.24
CLSTN3-202ENST00000331148 CFAP161Q6P656 301 aa13.53□□□□□ -0.24
CLSTN3-202ENST00000331148 C10orf105Q8TEF2 133 aa13.53□□□□□ -0.24
CLSTN3-202ENST00000331148 SIRPDQ9H106 197 aa13.53□□□□□ -0.24
CLSTN3-202ENST00000331148 H3BMM0 161 aa13.52□□□□□ -0.24
CLSTN3-202ENST00000331148 SOCS3O14543 225 aa13.52□□□□□ -0.24
CLSTN3-202ENST00000331148 UBE2WQ96B02 151 aa13.52□□□□□ -0.24
CLSTN3-202ENST00000331148 JPT2Q9H910 190 aa13.52□□□□□ -0.24
CLSTN3-202ENST00000331148 SDHAF1A6NFY7 115 aa13.52□□□□□ -0.25
CLSTN3-202ENST00000331148 FAM159AQ6UWV7 190 aa13.52□□□□□ -0.25
CLSTN3-202ENST00000331148 APRG1Q8IVJ8 170 aa13.52□□□□□ -0.25
CLSTN3-202ENST00000331148 UTP20O75691 2785 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-202ENST00000331148 BEX4Q9NWD9 120 aaPredicted RBP13.51□□□□□ -0.25
CLSTN3-202ENST00000331148 TRIAP1O43715 76 aa13.51□□□□□ -0.25
CLSTN3-202ENST00000331148 SMIM20Q8N5G0 67 aa13.51□□□□□ -0.25
CLSTN3-202ENST00000331148 NRGNQ92686 78 aa13.51□□□□□ -0.25
CLSTN3-202ENST00000331148 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
CLSTN3-202ENST00000331148 A0A087WWL8 130 aa13.5□□□□□ -0.25
CLSTN3-202ENST00000331148 TRBV27A0A0K0K1C4 114 aa13.5□□□□□ -0.25
CLSTN3-202ENST00000331148 F6UB75 175 aa13.5□□□□□ -0.25
CLSTN3-202ENST00000331148 LGALS9O00182 355 aa13.5□□□□□ -0.25
CLSTN3-202ENST00000331148 HERV-K104P63124 156 aa13.5□□□□□ -0.25
CLSTN3-202ENST00000331148 SHISA2Q6UWI4 295 aa13.5□□□□□ -0.25
CLSTN3-202ENST00000331148 TRBV30A0A0K0K1B3 111 aa13.5□□□□□ -0.25
CLSTN3-202ENST00000331148 M0R2P5 195 aa13.5□□□□□ -0.25
CLSTN3-202ENST00000331148 OPRPNQ99935 248 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-202ENST00000331148 IGHV4-61A0A0C4DH41 118 aa13.49□□□□□ -0.25
CLSTN3-202ENST00000331148 F5H697 171 aa13.49□□□□□ -0.25
CLSTN3-202ENST00000331148 IGHV1-69P01742 117 aa13.49□□□□□ -0.25
CLSTN3-202ENST00000331148 ZNF22P17026 224 aaPredicted RBP13.49□□□□□ -0.25
CLSTN3-202ENST00000331148 ASH1LQ9NR48 2969 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-202ENST00000331148 A0A0J9YX75 114 aa13.48□□□□□ -0.25
CLSTN3-202ENST00000331148 MED13LQ71F56 2210 aa13.48□□□□□ -0.25
CLSTN3-202ENST00000331148 IGHV4-30-2A0A087WSY4 118 aa13.47□□□□□ -0.25
CLSTN3-202ENST00000331148 UNQ9165/PRO28630Q6UXU0 137 aa13.47□□□□□ -0.25
CLSTN3-202ENST00000331148 TRBV6-5A0A0K0K1A5 114 aa13.47□□□□□ -0.25
CLSTN3-202ENST00000331148 UBE2E1P51965 193 aa13.47□□□□□ -0.25
CLSTN3-202ENST00000331148 CRYBG3Q68DQ2 2970 aa13.47□□□□□ -0.25
CLSTN3-202ENST00000331148 C2orf82Q6UX34 121 aa13.47□□□□□ -0.25
CLSTN3-202ENST00000331148 ZNF256Q9Y2P7 627 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-202ENST00000331148 MUC4Q99102 2169 aa13.46□□□□□ -0.25
CLSTN3-202ENST00000331148 LRRK2Q5S007 2527 aa13.46□□□□□ -0.25
CLSTN3-202ENST00000331148 A0A0J9YXY3 114 aa13.46□□□□□ -0.25
CLSTN3-202ENST00000331148 DSCR9P59020 149 aa13.46□□□□□ -0.25
CLSTN3-202ENST00000331148 NSUN5P1Q3KNT7 163 aa13.46□□□□□ -0.25
CLSTN3-202ENST00000331148 MRPL23Q16540 153 aaKnown RBP13.46□□□□□ -0.26
CLSTN3-202ENST00000331148 SPANXA1Q9NS26 97 aa13.46□□□□□ -0.26
CLSTN3-202ENST00000331148 MDFICQ9P1T7 246 aa13.46□□□□□ -0.26
CLSTN3-202ENST00000331148 ZNF580Q9UK33 172 aa13.46□□□□□ -0.26
CLSTN3-202ENST00000331148 SPG11Q96JI7 2443 aa13.45□□□□□ -0.26
CLSTN3-202ENST00000331148 H7C423 109 aa13.44□□□□□ -0.26
CLSTN3-202ENST00000331148 RHOHQ15669 191 aa13.44□□□□□ -0.26
CLSTN3-202ENST00000331148 ICOSQ9Y6W8 199 aa13.44□□□□□ -0.26
CLSTN3-202ENST00000331148 A0A0J9YXV3 536 aa13.43□□□□□ -0.26
CLSTN3-202ENST00000331148 H3BT86 120 aa13.43□□□□□ -0.26
CLSTN3-202ENST00000331148 LITAFQ99732 161 aa13.43□□□□□ -0.26
CLSTN3-202ENST00000331148 RPL11P62913 178 aaKnown RBP13.43□□□□□ -0.26
CLSTN3-202ENST00000331148 MEIG1Q5JSS6 88 aa13.43□□□□□ -0.26
CLSTN3-202ENST00000331148 FAM74A4Q5TZK3 123 aa13.43□□□□□ -0.26
CLSTN3-202ENST00000331148 FAM223BA6NKX1 122 aa13.42□□□□□ -0.26
CLSTN3-202ENST00000331148 KLLNB2CW77 178 aa13.42□□□□□ -0.26
CLSTN3-202ENST00000331148 TRBV12-3P01733 135 aa13.42□□□□□ -0.26
CLSTN3-202ENST00000331148 FAM223AQ8IWN6 122 aa13.42□□□□□ -0.26
CLSTN3-202ENST00000331148 SAA4P35542 130 aa13.42□□□□□ -0.26
CLSTN3-202ENST00000331148 FAM240AA0A1B0GVK7 77 aa13.41□□□□□ -0.26
CLSTN3-202ENST00000331148 ADARB2-AS1A8MUL3 147 aa13.41□□□□□ -0.26
CLSTN3-202ENST00000331148 C5orf56Q8N8D9 126 aa13.41□□□□□ -0.26
CLSTN3-202ENST00000331148 IGKV3-7A0A075B6H7 116 aa13.41□□□□□ -0.26
CLSTN3-202ENST00000331148 TRAV41A0A0B4J266 112 aa13.41□□□□□ -0.26
CLSTN3-202ENST00000331148 NDUFA4O00483 81 aa13.41□□□□□ -0.26
CLSTN3-202ENST00000331148 ZNF56Q15929 161 aa13.41□□□□□ -0.26
CLSTN3-202ENST00000331148 LINC00527Q9UJ94 153 aa13.41□□□□□ -0.26
CLSTN3-202ENST00000331148 IGLV4-3A0A075B6K6 122 aa13.4□□□□□ -0.26
CLSTN3-202ENST00000331148 M0QY20 66 aa13.4□□□□□ -0.26
CLSTN3-202ENST00000331148 IGHV3-30-3P0DP02 117 aa13.4□□□□□ -0.26
CLSTN3-202ENST00000331148 C20orf203Q8NBC4 194 aa13.4□□□□□ -0.26
CLSTN3-202ENST00000331148 CHD6Q8TD26 2715 aa13.4□□□□□ -0.26
CLSTN3-202ENST00000331148 NPFFO15130 113 aa13.39□□□□□ -0.27
CLSTN3-202ENST00000331148 KRTAP10-9P60411 292 aa13.39□□□□□ -0.27
CLSTN3-202ENST00000331148 MSMBP08118 114 aa13.39□□□□□ -0.27
CLSTN3-202ENST00000331148 C19orf54Q5BKX5 351 aa13.39□□□□□ -0.27
CLSTN3-202ENST00000331148 ABCA2Q9BZC7 2435 aa13.38□□□□□ -0.27
CLSTN3-202ENST00000331148 PRSS2P07478 247 aa13.38□□□□□ -0.27
CLSTN3-202ENST00000331148 DEFB121Q5J5C9 76 aa13.38□□□□□ -0.27
CLSTN3-202ENST00000331148 CLEC2BQ92478 149 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms