RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 A0A087WX48 190 aa10.77□□□□□ -0.68
HDDC2-201ENST00000318787 TMEM262E9PQX1 116 aa10.77□□□□□ -0.68
HDDC2-201ENST00000318787 IGLC6P0CF74 106 aa10.77□□□□□ -0.68
HDDC2-201ENST00000318787 LYZL1Q6UWQ5 148 aa10.77□□□□□ -0.68
HDDC2-201ENST00000318787 NUDT10Q8NFP7 164 aa10.77□□□□□ -0.68
HDDC2-201ENST00000318787 OCC1Q8TAD7 63 aa10.77□□□□□ -0.68
HDDC2-201ENST00000318787 NUDT11Q96G61 164 aa10.77□□□□□ -0.68
HDDC2-201ENST00000318787 K7EN84 100 aa10.77□□□□□ -0.69
HDDC2-201ENST00000318787 CACNG7P62955 275 aa10.77□□□□□ -0.69
HDDC2-201ENST00000318787 CDK2AP2O75956 126 aa10.76□□□□□ -0.69
HDDC2-201ENST00000318787 LAGE3Q14657 143 aa10.76□□□□□ -0.69
HDDC2-201ENST00000318787 NIT1Q86X76 327 aa10.76□□□□□ -0.69
HDDC2-201ENST00000318787 MAPKAPK5-AS1Q8N8E1 139 aa10.76□□□□□ -0.69
HDDC2-201ENST00000318787 RPP21Q9H633 154 aaKnown RBP10.76□□□□□ -0.69
HDDC2-201ENST00000318787 KLK12Q9UKR0 248 aa10.76□□□□□ -0.69
HDDC2-201ENST00000318787 F2Z2F3 143 aa10.75□□□□□ -0.69
HDDC2-201ENST00000318787 NTF3P20783 257 aa10.75□□□□□ -0.69
HDDC2-201ENST00000318787 OR10G8Q8NGN5 311 aa10.75□□□□□ -0.69
HDDC2-201ENST00000318787 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
HDDC2-201ENST00000318787 KIF25-AS1Q9Y6Z4 181 aa10.75□□□□□ -0.69
HDDC2-201ENST00000318787 ABCA13Q86UQ4 5058 aa10.74□□□□□ -0.69
HDDC2-201ENST00000318787 TRAV8-3A0A0A6YYJ7 113 aa10.74□□□□□ -0.69
HDDC2-201ENST00000318787 TMEM250H0YL14 139 aa10.74□□□□□ -0.69
HDDC2-201ENST00000318787 LECT2O14960 151 aa10.74□□□□□ -0.69
HDDC2-201ENST00000318787 TRGC1P0CF51 173 aa10.74□□□□□ -0.69
HDDC2-201ENST00000318787 TWIST1Q15672 202 aa10.74□□□□□ -0.69
HDDC2-201ENST00000318787 CDPF1Q6NVV7 123 aa10.74□□□□□ -0.69
HDDC2-201ENST00000318787 CHCHD5Q9BSY4 110 aa10.74□□□□□ -0.69
HDDC2-201ENST00000318787 DNAH5Q8TE73 4624 aa10.73□□□□□ -0.69
HDDC2-201ENST00000318787 IGKV2D-24A0A075B6R9 120 aa10.73□□□□□ -0.69
HDDC2-201ENST00000318787 IGLV5-52A0A0A0MRZ9 124 aa10.73□□□□□ -0.69
HDDC2-201ENST00000318787 TRBV6-8A0A0A6YYG3 113 aa10.73□□□□□ -0.69
HDDC2-201ENST00000318787 H7C1H1 209 aa10.73□□□□□ -0.69
HDDC2-201ENST00000318787 SUMO4Q6EEV6 95 aa10.73□□□□□ -0.69
HDDC2-201ENST00000318787 UBE2WQ96B02 151 aa10.73□□□□□ -0.69
HDDC2-201ENST00000318787 APOBP04114 4563 aaKnown RBP10.72□□□□□ -0.69
HDDC2-201ENST00000318787 LRCOL1A6NCL2 159 aa10.72□□□□□ -0.69
HDDC2-201ENST00000318787 GATCO43716 136 aaKnown RBP10.72□□□□□ -0.69
HDDC2-201ENST00000318787 LYPD6BQ8NI32 183 aa10.72□□□□□ -0.69
HDDC2-201ENST00000318787 DNAJC30Q96LL9 226 aa10.72□□□□□ -0.69
HDDC2-201ENST00000318787 SMIM7Q9BQ49 75 aa10.72□□□□□ -0.69
HDDC2-201ENST00000318787 DPH3P1Q9H4G8 78 aa10.72□□□□□ -0.69
HDDC2-201ENST00000318787 C15orf54Q8N8G6 183 aa10.71□□□□□ -0.69
HDDC2-201ENST00000318787 DEFB104AQ8WTQ1 72 aa10.71□□□□□ -0.69
HDDC2-201ENST00000318787 FAM210AQ96ND0 272 aa10.71□□□□□ -0.69
HDDC2-201ENST00000318787 KRTAP4-5Q9BYR2 181 aa10.71□□□□□ -0.69
HDDC2-201ENST00000318787 ZNF727A8MUV8 499 aa10.7□□□□□ -0.7
HDDC2-201ENST00000318787 CRPP02741 224 aa10.7□□□□□ -0.7
HDDC2-201ENST00000318787 ANGP03950 147 aaKnown RBP10.7□□□□□ -0.7
HDDC2-201ENST00000318787 CTRLP40313 264 aa10.7□□□□□ -0.7
HDDC2-201ENST00000318787 ELOBQ15370 118 aa10.7□□□□□ -0.7
HDDC2-201ENST00000318787 MPV17L2Q567V2 206 aa10.7□□□□□ -0.7
HDDC2-201ENST00000318787 Q8N814 137 aa10.7□□□□□ -0.7
HDDC2-201ENST00000318787 RMI2Q96E14 147 aa10.7□□□□□ -0.7
HDDC2-201ENST00000318787 M0QY20 66 aa10.69□□□□□ -0.7
HDDC2-201ENST00000318787 GCSHP23434 173 aa10.69□□□□□ -0.7
HDDC2-201ENST00000318787 KRTAP10-1P60331 282 aa10.69□□□□□ -0.7
HDDC2-201ENST00000318787 GAGE6Q13070 117 aa10.69□□□□□ -0.7
HDDC2-201ENST00000318787 RASL11AQ6T310 242 aa10.69□□□□□ -0.7
HDDC2-201ENST00000318787 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.68□□□□□ -0.7
HDDC2-201ENST00000318787 TRBV25-1A0A075B6N4 114 aa10.68□□□□□ -0.7
HDDC2-201ENST00000318787 A6NJY4 79 aa10.68□□□□□ -0.7
HDDC2-201ENST00000318787 WFDC2Q14508 124 aa10.68□□□□□ -0.7
HDDC2-201ENST00000318787 TMEM97Q5BJF2 176 aa10.68□□□□□ -0.7
HDDC2-201ENST00000318787 SMIM15Q7Z3B0 74 aa10.68□□□□□ -0.7
HDDC2-201ENST00000318787 Q8N976 141 aa10.68□□□□□ -0.7
HDDC2-201ENST00000318787 GTSF1Q8WW33 167 aa10.68□□□□□ -0.7
HDDC2-201ENST00000318787 BAALCQ8WXS3 180 aa10.68□□□□□ -0.7
HDDC2-201ENST00000318787 PGLYRP4Q96LB8 373 aa10.68□□□□□ -0.7
HDDC2-201ENST00000318787 CHCHD7Q9BUK0 85 aa10.68□□□□□ -0.7
HDDC2-201ENST00000318787 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
HDDC2-201ENST00000318787 CLPSL2Q6UWE3 100 aa10.67□□□□□ -0.7
HDDC2-201ENST00000318787 NTM-AS1Q6ZSK4 140 aa10.67□□□□□ -0.7
HDDC2-201ENST00000318787 COX11Q9Y6N1 276 aa10.67□□□□□ -0.7
HDDC2-201ENST00000318787 A8MWL6 223 aa10.66□□□□□ -0.7
HDDC2-201ENST00000318787 SRP19P09132 144 aaKnown RBP10.66□□□□□ -0.7
HDDC2-201ENST00000318787 ATRAIDQ6UW56 229 aa10.66□□□□□ -0.7
HDDC2-201ENST00000318787 BORCS7Q96B45 105 aa10.66□□□□□ -0.7
HDDC2-201ENST00000318787 IGHV1-24A0A0C4DH33 117 aa10.65□□□□□ -0.7
HDDC2-201ENST00000318787 HAMPP81172 84 aa10.65□□□□□ -0.7
HDDC2-201ENST00000318787 Q0VG73 95 aa10.65□□□□□ -0.7
HDDC2-201ENST00000318787 WDR73Q6P4I2 378 aa10.65□□□□□ -0.7
HDDC2-201ENST00000318787 FAM231DQ6ZW35 169 aa10.65□□□□□ -0.7
HDDC2-201ENST00000318787 LINC01551Q86U37 167 aa10.65□□□□□ -0.7
HDDC2-201ENST00000318787 NTN5Q8WTR8 489 aaPredicted RBP10.65□□□□□ -0.7
HDDC2-201ENST00000318787 C1orf43Q9BWL3 253 aa10.65□□□□□ -0.7
HDDC2-201ENST00000318787 NIT2Q9NQR4 276 aa10.65□□□□□ -0.7
HDDC2-201ENST00000318787 FOXA3P55318 350 aaPredicted RBP10.65□□□□□ -0.71
HDDC2-201ENST00000318787 PKIAP61925 76 aa10.65□□□□□ -0.71
HDDC2-201ENST00000318787 HLA-DQA1P01909 254 aa10.64□□□□□ -0.71
HDDC2-201ENST00000318787 TEX261Q6UWH6 196 aa10.64□□□□□ -0.71
HDDC2-201ENST00000318787 Q8N1X5 172 aa10.64□□□□□ -0.71
HDDC2-201ENST00000318787 CNFNQ9BYD5 112 aa10.64□□□□□ -0.71
HDDC2-201ENST00000318787 UBE2L6O14933 153 aa10.63□□□□□ -0.71
HDDC2-201ENST00000318787 RBX1P62877 108 aa10.63□□□□□ -0.71
HDDC2-201ENST00000318787 ENHOQ6UWT2 76 aa10.63□□□□□ -0.71
HDDC2-201ENST00000318787 GATD1Q8NB37 220 aa10.63□□□□□ -0.71
HDDC2-201ENST00000318787 TMEM243Q9BU79 118 aa10.63□□□□□ -0.71
HDDC2-201ENST00000318787 AMTP48728 403 aa10.62□□□□□ -0.71
HDDC2-201ENST00000318787 COTL1Q14019 142 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms