RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 LEPROTO15243 131 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 IGHV4-38-2P0DP08 117 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 PMVKQ15126 192 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 UBE2E2Q96LR5 201 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 SCGB3A1Q96QR1 104 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 ABCA4P78363 2273 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 TRBV7-7A0A0K0K1E9 115 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 ZNF815PA8K554 130 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 SPINK8P0C7L1 97 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 Q6ZSV7 163 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 TMEM86BQ8N661 226 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 CHCHD7Q9BUK0 85 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 CSMD3Q7Z407 3707 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 TRBV20-1A0A075B6N2 111 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 A0A0J9YXY3 114 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 VCYO14598 125 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 TRIAP1O43715 76 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 RHPN1-AS1Q9BWJ2 59 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 ZNF702PQ9H963 129 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 UBTD1Q9HAC8 227 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 TP53TG1Q9Y2A0 90 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 A4D1N5 150 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 A6NJY4 79 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 ID1P41134 155 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 Q6ZSN1 163 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 DOPEY2Q9Y3R5 2298 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 CFAP46Q8IYW2 2715 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 AVPP01185 164 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 TIMM21Q9BVV7 248 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 CEP250Q9BV73 2442 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 MED13LQ71F56 2210 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 IGHV4-30-2A0A087WSY4 118 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 CCDC179H3BU77 68 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 LINC01356Q8N9X3 169 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 C20orf203Q8NBC4 194 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 PRO1854Q9UHT4 67 aa3.94□□□□□ -1.78
VPS50-202ENST00000305866 SETXQ7Z333 2677 aaKnown RBP3.93□□□□□ -1.78
VPS50-202ENST00000305866 RBMY1BA6NDE4 496 aaKnown RBP3.93□□□□□ -1.78
VPS50-202ENST00000305866 RBMY1EA6NEQ0 496 aaKnown RBP3.93□□□□□ -1.78
VPS50-202ENST00000305866 J3QQQ9 107 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 TIMM17BO60830 172 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 RBMY1DP0C7P1 496 aaKnown RBP3.93□□□□□ -1.78
VPS50-202ENST00000305866 NDUFV3P56181 108 aaKnown RBP3.93□□□□□ -1.78
VPS50-202ENST00000305866 SPANXN1Q5VSR9 72 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 SHISA2Q6UWI4 295 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 KRTAP1-3Q8IUG1 177 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 MUSTN1Q8IVN3 82 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 C2orf48Q96LS8 159 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 OBSCN-AS1Q96MR7 158 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 CCL19Q99731 98 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 FAM110AQ9BQ89 295 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 FAM240AA0A1B0GVK7 77 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 GNLYP22749 145 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 SOSTDC1Q6X4U4 206 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 DNAJC30Q96LL9 226 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 BEX4Q9NWD9 120 aaPredicted RBP3.93□□□□□ -1.78
VPS50-202ENST00000305866 IGHV3OR16-13A0A075B7E8 117 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 IGHV3-74A0A0B4J1X5 117 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 IGLV5-39A0A0G2JS06 123 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 TEX49A0A1B0GTD5 131 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 C11orf72Q8NBR9 251 aa3.93□□□□□ -1.78
VPS50-202ENST00000305866 IGHV3-49A0A0A0MS15 119 aa3.92□□□□□ -1.78
VPS50-202ENST00000305866 PSMB2P49721 201 aa3.92□□□□□ -1.78
VPS50-202ENST00000305866 EMP1P54849 157 aa3.92□□□□□ -1.78
VPS50-202ENST00000305866 BLCAPP62952 87 aa3.92□□□□□ -1.78
VPS50-202ENST00000305866 CSDC2Q9Y534 153 aaKnown RBP3.92□□□□□ -1.78
VPS50-202ENST00000305866 ROS1P08922 2347 aa3.92□□□□□ -1.78
VPS50-202ENST00000305866 PCNX1Q96RV3 2341 aa3.92□□□□□ -1.78
VPS50-202ENST00000305866 H3BUX3 64 aa3.92□□□□□ -1.78
VPS50-202ENST00000305866 SLC25A20O43772 301 aa3.92□□□□□ -1.78
VPS50-202ENST00000305866 TMEM219Q86XT9 240 aa3.92□□□□□ -1.78
VPS50-202ENST00000305866 VPREB3Q9UKI3 123 aa3.92□□□□□ -1.78
VPS50-202ENST00000305866 TRAV25A0A0B4J276 109 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 TRBV10-2A0A0K0K1G8 114 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 F5H768 121 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 LST1O00453 97 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 SCGB2A2Q13296 93 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 LINC01620Q4KN68 170 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 C4orf3Q8WVX3 66 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 UBE2D4Q9Y2X8 147 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 CHD6Q8TD26 2715 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 TRGV11A0A075B6L2 103 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 IGHV1OR15-1A0A075B7D0 117 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 IGHV3-30-3P0DP02 117 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 SS18Q15532 418 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 CYSTM1Q9H1C7 97 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 PHLDA3Q9Y5J5 127 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 CNOT1A5YKK6 2376 aaKnown RBP3.91□□□□□ -1.78
VPS50-202ENST00000305866 IGHV3OR16-10A0A075B7F0 116 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 LY6DQ14210 128 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 MRPL23Q16540 153 aaKnown RBP3.91□□□□□ -1.78
VPS50-202ENST00000305866 C5orf38Q86SI9 138 aa3.91□□□□□ -1.78
VPS50-202ENST00000305866 RS1O15537 224 aa3.9□□□□□ -1.78
VPS50-202ENST00000305866 LINC00694P0DN24 101 aa3.9□□□□□ -1.78
VPS50-202ENST00000305866 IGHV4-31P0DP07 118 aa3.9□□□□□ -1.78
VPS50-202ENST00000305866 IFITM1P13164 125 aa3.9□□□□□ -1.78
VPS50-202ENST00000305866 PROK1P58294 105 aa3.9□□□□□ -1.78
VPS50-202ENST00000305866 TMEM61Q8N0U2 210 aa3.9□□□□□ -1.78
VPS50-202ENST00000305866 VSIG2Q96IQ7 327 aa3.9□□□□□ -1.78
VPS50-202ENST00000305866 TINCRA0A1B0GVN0 87 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms