RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 C2CD3Q4AC94 2353 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 K7EIM0 57 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 TRBV12-3P01733 135 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 C2orf91Q6ZV80 131 aa8.3□□□□□ -1.08
PKNOX1-201ENST00000291547 TRAV23DV6A0A075B6W5 121 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 ODF1Q14990 250 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 IGHV3-30P01768 117 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 IGHV3-33P01772 117 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 IGHV3-30-3P0DP02 117 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 IGHV3-30-5P0DP03 117 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 IGFL2Q6UWQ7 119 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 DSCAML1Q8TD84 2053 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 I3L2K1 104 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 Q71RC1 249 aaPredicted RBP8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 C20orf197Q8N268 126 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 MIR7-3HGQ8N6C7 128 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 CTSZQ9UBR2 303 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 IGHV4-59P01825 116 aa8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 MRPL55Q7Z7F7 128 aaKnown RBP8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 FGF23Q9GZV9 251 aaPredicted RBP8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 MRPL36Q9P0J6 103 aaKnown RBP8.29□□□□□ -1.08
PKNOX1-201ENST00000291547 FRMD6-AS1P0C7T7 363 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 SEM1Q6ZVN7 128 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 ODF3L1Q8IXM7 274 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 TOMM6Q96B49 74 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 PIFOQ8TCI5 191 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 ESM1Q9NQ30 184 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 NDUFA1O15239 70 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 CTSGP08311 255 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 CSPG4Q6UVK1 2322 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 DIRC1Q969H9 104 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 AJUBAQ96IF1 538 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 FAM167A-AS1Q96KT0 104 aa8.28□□□□□ -1.08
PKNOX1-201ENST00000291547 PRAC2D3DTV9 90 aa8.27□□□□□ -1.08
PKNOX1-201ENST00000291547 TMEM256-PLSCR3K7ERE1 68 aa8.27□□□□□ -1.08
PKNOX1-201ENST00000291547 CCL24O00175 119 aa8.27□□□□□ -1.08
PKNOX1-201ENST00000291547 DEFB112Q30KQ8 113 aa8.27□□□□□ -1.08
PKNOX1-201ENST00000291547 C9orf47Q6ZRZ4 202 aa8.27□□□□□ -1.08
PKNOX1-201ENST00000291547 RNF152Q8N8N0 203 aa8.27□□□□□ -1.08
PKNOX1-201ENST00000291547 Q8N1Y9 231 aa8.27□□□□□ -1.09
PKNOX1-201ENST00000291547 NDUFA11Q86Y39 141 aa8.27□□□□□ -1.09
PKNOX1-201ENST00000291547 C11orf53Q8IXP5 236 aa8.27□□□□□ -1.09
PKNOX1-201ENST00000291547 C3orf22Q8N5N4 141 aa8.27□□□□□ -1.09
PKNOX1-201ENST00000291547 MPLKIPQ8TAP9 179 aa8.27□□□□□ -1.09
PKNOX1-201ENST00000291547 IGHV7-81A0A0B4J1V7 117 aa8.27□□□□□ -1.09
PKNOX1-201ENST00000291547 SEC61GP60059 68 aa8.27□□□□□ -1.09
PKNOX1-201ENST00000291547 C16orf74Q96GX8 76 aa8.27□□□□□ -1.09
PKNOX1-201ENST00000291547 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.09
PKNOX1-201ENST00000291547 Q6ZSR3 168 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 IGLV11-55A0A075B6I3 123 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 TRBV7-3A0A075B6L6 115 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 CCDC179H3BU77 68 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 TCL1BO95988 128 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 HOXB4P17483 251 aaPredicted RBP8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 PDE6GP18545 87 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 UBE2AP49459 152 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 SLURP1P55000 103 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 FAM215AQ9Y5M1 114 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 A0A1B0GXF2 115 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 ZMAT4Q9H898 229 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 WI2-2373I1.2A0A1W2PRP0 233 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 H0Y9J4 135 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 XGP55808 180 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 SPAG11BQ08648 103 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 PKIGQ9Y2B9 76 aa8.26□□□□□ -1.09
PKNOX1-201ENST00000291547 A0A0U1RQV1 116 aa8.25□□□□□ -1.09
PKNOX1-201ENST00000291547 SPART-AS1P0CW21 52 aa8.25□□□□□ -1.09
PKNOX1-201ENST00000291547 CSDC2Q9Y534 153 aaKnown RBP8.25□□□□□ -1.09
PKNOX1-201ENST00000291547 NRGNQ92686 78 aa8.25□□□□□ -1.09
PKNOX1-201ENST00000291547 UPK3BQ9BT76 320 aa8.25□□□□□ -1.09
PKNOX1-201ENST00000291547 NDUFA7O95182 113 aa8.25□□□□□ -1.09
PKNOX1-201ENST00000291547 CHD7Q9P2D1 2997 aa8.25□□□□□ -1.09
PKNOX1-201ENST00000291547 V9GYY9 64 aa8.25□□□□□ -1.09
PKNOX1-201ENST00000291547 BPY2O14599 106 aa8.24□□□□□ -1.09
PKNOX1-201ENST00000291547 CXCL5P42830 114 aa8.24□□□□□ -1.09
PKNOX1-201ENST00000291547 TEX22C9J3V5 150 aa8.24□□□□□ -1.09
PKNOX1-201ENST00000291547 CCL18P55774 89 aa8.24□□□□□ -1.09
PKNOX1-201ENST00000291547 BLCAPP62952 87 aa8.24□□□□□ -1.09
PKNOX1-201ENST00000291547 IMUPQ9GZP8 106 aa8.24□□□□□ -1.09
PKNOX1-201ENST00000291547 TNRC6AQ8NDV7 1962 aaKnown RBP8.23□□□□□ -1.09
PKNOX1-201ENST00000291547 C20orf203Q8NBC4 194 aa8.23□□□□□ -1.09
PKNOX1-201ENST00000291547 FAM236DA0A1B0GTK5 79 aa8.23□□□□□ -1.09
PKNOX1-201ENST00000291547 IGLC6P0CF74 106 aa8.23□□□□□ -1.09
PKNOX1-201ENST00000291547 FAM236CP0DP71 79 aa8.23□□□□□ -1.09
PKNOX1-201ENST00000291547 RITA1Q96K30 269 aa8.23□□□□□ -1.09
PKNOX1-201ENST00000291547 IGKV4-1P06312 121 aa8.23□□□□□ -1.09
PKNOX1-201ENST00000291547 FAM240AA0A1B0GVK7 77 aa8.23□□□□□ -1.09
PKNOX1-201ENST00000291547 CFAP126Q5VTH2 177 aa8.23□□□□□ -1.09
PKNOX1-201ENST00000291547 SDIM1Q6ZPB5 146 aa8.23□□□□□ -1.09
PKNOX1-201ENST00000291547 BRCA2P51587 3418 aa8.22□□□□□ -1.09
PKNOX1-201ENST00000291547 PTPN13Q12923 2485 aa8.22□□□□□ -1.09
PKNOX1-201ENST00000291547 TEX49A0A1B0GTD5 131 aa8.22□□□□□ -1.09
PKNOX1-201ENST00000291547 DEFB1P60022 68 aa8.22□□□□□ -1.09
PKNOX1-201ENST00000291547 IGHV4OR15-8A0A075B7B6 117 aa8.22□□□□□ -1.09
PKNOX1-201ENST00000291547 A0A087WW49 117 aa8.22□□□□□ -1.09
PKNOX1-201ENST00000291547 LOXL1Q08397 574 aaPredicted RBP8.22□□□□□ -1.09
PKNOX1-201ENST00000291547 HHLA3Q9XRX5 114 aa8.22□□□□□ -1.09
PKNOX1-201ENST00000291547 EML5Q05BV3 1969 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms