RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 LELP1Q5T871 98 aa9.23□□□□□ -0.93
CT55-201ENST00000276241 FER1L6-AS1Q8NA97 138 aa9.23□□□□□ -0.93
CT55-201ENST00000276241 RPS20P60866 119 aaKnown RBP9.22□□□□□ -0.93
CT55-201ENST00000276241 Q6ZRN7 208 aaPredicted RBP9.22□□□□□ -0.93
CT55-201ENST00000276241 SSBP4Q9BWG4 385 aaPredicted RBP9.22□□□□□ -0.93
CT55-201ENST00000276241 BIN3Q9NQY0 253 aa9.22□□□□□ -0.93
CT55-201ENST00000276241 MSRB1Q9NZV6 116 aa9.22□□□□□ -0.93
CT55-201ENST00000276241 DNAH17Q9UFH2 4485 aa9.22□□□□□ -0.93
CT55-201ENST00000276241 C10orf126Q8N4M7 172 aa9.22□□□□□ -0.93
CT55-201ENST00000276241 AP1S3Q96PC3 154 aa9.22□□□□□ -0.93
CT55-201ENST00000276241 URGCP-MRPS24S4R325 110 aa9.22□□□□□ -0.93
CT55-201ENST00000276241 TRBV24-1A0A075B6N3 115 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 XKRY2A2RUG3 117 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 C16orf90A8MZG2 172 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 F5H697 171 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 K7EN84 100 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 IGLC6P0CF74 106 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 SMIM17P0DL12 118 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 RPL36AP83881 106 aaKnown RBP9.21□□□□□ -0.94
CT55-201ENST00000276241 LINC01556Q5JQF7 62 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 KCNIP4Q6PIL6 250 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 SPATA12Q7Z6I5 190 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 NFE4Q86UQ8 179 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 RPL36ALQ969Q0 106 aaKnown RBP9.21□□□□□ -0.94
CT55-201ENST00000276241 BTF3L4Q96K17 158 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 IMMP2LQ96T52 175 aa9.21□□□□□ -0.94
CT55-201ENST00000276241 RNASE7Q9H1E1 156 aaKnown RBP9.21□□□□□ -0.94
CT55-201ENST00000276241 K7EP13 123 aa9.2□□□□□ -0.94
CT55-201ENST00000276241 MGPP08493 103 aa9.2□□□□□ -0.94
CT55-201ENST00000276241 RPS10P46783 165 aaKnown RBP9.2□□□□□ -0.94
CT55-201ENST00000276241 RAB4BP61018 213 aa9.2□□□□□ -0.94
CT55-201ENST00000276241 Q8N3U1 123 aa9.2□□□□□ -0.94
CT55-201ENST00000276241 NUDT10Q8NFP7 164 aa9.2□□□□□ -0.94
CT55-201ENST00000276241 NUDT11Q96G61 164 aa9.2□□□□□ -0.94
CT55-201ENST00000276241 TGIF2-C20orf24A0A0A6YYL0 155 aa9.19□□□□□ -0.94
CT55-201ENST00000276241 TRBV10-1A0A0K0K1A3 114 aa9.19□□□□□ -0.94
CT55-201ENST00000276241 ERVFC1-1P60608 527 aa9.19□□□□□ -0.94
CT55-201ENST00000276241 OCC1Q8TAD7 63 aa9.19□□□□□ -0.94
CT55-201ENST00000276241 RPP21Q9H633 154 aaKnown RBP9.19□□□□□ -0.94
CT55-201ENST00000276241 Q9HAA7 133 aa9.19□□□□□ -0.94
CT55-201ENST00000276241 PKD1P98161 4303 aa9.18□□□□□ -0.94
CT55-201ENST00000276241 CACNG7P62955 275 aa9.18□□□□□ -0.94
CT55-201ENST00000276241 LYZL1Q6UWQ5 148 aa9.18□□□□□ -0.94
CT55-201ENST00000276241 NEXN-AS1Q8NBZ9 246 aa9.18□□□□□ -0.94
CT55-201ENST00000276241 OR10G8Q8NGN5 311 aa9.18□□□□□ -0.94
CT55-201ENST00000276241 TRBV7-3A0A075B6L6 115 aa9.17□□□□□ -0.94
CT55-201ENST00000276241 KRTAP10-2P60368 255 aa9.17□□□□□ -0.94
CT55-201ENST00000276241 UBE2D3P61077 147 aa9.17□□□□□ -0.94
CT55-201ENST00000276241 UBE2D2P62837 147 aa9.17□□□□□ -0.94
CT55-201ENST00000276241 TRAV9-1A0A075B6T8 112 aa9.16□□□□□ -0.94
CT55-201ENST00000276241 F2Z2F3 143 aa9.16□□□□□ -0.94
CT55-201ENST00000276241 PSCAO43653 123 aa9.16□□□□□ -0.94
CT55-201ENST00000276241 S100A6P06703 90 aa9.16□□□□□ -0.94
CT55-201ENST00000276241 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
CT55-201ENST00000276241 IBA57-AS1B1ANH7 110 aa9.15□□□□□ -0.94
CT55-201ENST00000276241 EREGO14944 169 aa9.15□□□□□ -0.94
CT55-201ENST00000276241 CTRLP40313 264 aa9.15□□□□□ -0.94
CT55-201ENST00000276241 KIAA1109Q2LD37 5005 aa9.15□□□□□ -0.95
CT55-201ENST00000276241 GATCO43716 136 aaKnown RBP9.14□□□□□ -0.95
CT55-201ENST00000276241 TRGC1P0CF51 173 aa9.14□□□□□ -0.95
CT55-201ENST00000276241 NTF3P20783 257 aa9.14□□□□□ -0.95
CT55-201ENST00000276241 FUSP35637 526 aaKnown RBP eCLIP9.14□□□□□ -0.95
CT55-201ENST00000276241 DAZ4Q86SG3 579 aaKnown RBP9.14□□□□□ -0.95
CT55-201ENST00000276241 DAZ3Q9NR90 486 aaKnown RBP9.14□□□□□ -0.95
CT55-201ENST00000276241 OSTCQ9NRP0 149 aa9.14□□□□□ -0.95
CT55-201ENST00000276241 A0A087WTM6 91 aa9.14□□□□□ -0.95
CT55-201ENST00000276241 TWIST1Q15672 202 aa9.14□□□□□ -0.95
CT55-201ENST00000276241 SUMO4Q6EEV6 95 aa9.14□□□□□ -0.95
CT55-201ENST00000276241 LAGE3Q14657 143 aa9.13□□□□□ -0.95
CT55-201ENST00000276241 NIT1Q86X76 327 aa9.13□□□□□ -0.95
CT55-201ENST00000276241 DPH3P1Q9H4G8 78 aa9.13□□□□□ -0.95
CT55-201ENST00000276241 PKHD1P08F94 4074 aa9.12□□□□□ -0.95
CT55-201ENST00000276241 A0A087WX48 190 aa9.12□□□□□ -0.95
CT55-201ENST00000276241 H7C1H1 209 aa9.12□□□□□ -0.95
CT55-201ENST00000276241 TRGC2P03986 189 aa9.12□□□□□ -0.95
CT55-201ENST00000276241 FAM231DQ6ZW35 169 aa9.12□□□□□ -0.95
CT55-201ENST00000276241 GTSF1Q8WW33 167 aa9.12□□□□□ -0.95
CT55-201ENST00000276241 V9GYV3 84 aa9.12□□□□□ -0.95
CT55-201ENST00000276241 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
CT55-201ENST00000276241 HERC2O95714 4834 aa9.11□□□□□ -0.95
CT55-201ENST00000276241 DYNC1H1Q14204 4646 aaKnown RBP9.11□□□□□ -0.95
CT55-201ENST00000276241 TRBV6-8A0A0A6YYG3 113 aa9.11□□□□□ -0.95
CT55-201ENST00000276241 C5orf52A6NGY3 159 aa9.11□□□□□ -0.95
CT55-201ENST00000276241 M0QY20 66 aa9.11□□□□□ -0.95
CT55-201ENST00000276241 PGLYRP4Q96LB8 373 aa9.11□□□□□ -0.95
CT55-201ENST00000276241 A8MWL6 223 aa9.1□□□□□ -0.95
CT55-201ENST00000276241 TMEM262E9PQX1 116 aa9.1□□□□□ -0.95
CT55-201ENST00000276241 SNRPEP62304 92 aaKnown RBP9.1□□□□□ -0.95
CT55-201ENST00000276241 CHCHD5Q9BSY4 110 aa9.1□□□□□ -0.95
CT55-201ENST00000276241 CNFNQ9BYD5 112 aa9.1□□□□□ -0.95
CT55-201ENST00000276241 KLK12Q9UKR0 248 aa9.1□□□□□ -0.95
CT55-201ENST00000276241 TRAV8-3A0A0A6YYJ7 113 aa9.09□□□□□ -0.95
CT55-201ENST00000276241 HIST1H2BKO60814 126 aa9.09□□□□□ -0.95
CT55-201ENST00000276241 HIST1H2BJP06899 126 aa9.09□□□□□ -0.95
CT55-201ENST00000276241 HIST1H2BOP23527 126 aa9.09□□□□□ -0.95
CT55-201ENST00000276241 HIST1H2BBP33778 126 aa9.09□□□□□ -0.95
CT55-201ENST00000276241 HIST1H2BDP58876 126 aa9.09□□□□□ -0.95
CT55-201ENST00000276241 HIST1H2BCP62807 126 aa9.09□□□□□ -0.95
CT55-201ENST00000276241 HIST2H2BEQ16778 126 aa9.09□□□□□ -0.95
CT55-201ENST00000276241 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms