RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 4933414I15RikQ9D4D5 133 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Cmtm2bQ9DAC0 210 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Mrps11Q9DCA2 191 aaKnown RBP12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 BlnkQ9QUN3 457 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Samt1A2BED8 237 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm15140A2BEE3 237 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Ssty1P13675 232 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Slc25a31Q3V132 320 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 E130116L18RikQ8BMV6 101 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 AdtrpQ8C138 230 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Zfp119aQ9JIC0 545 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr159Q9QZ19 319 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm28372A0A087WNV0 220 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr556E9Q549 324 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Hoxa5P09021 270 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Q3UUX7 111 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Neil2Q6R2P8 329 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Igfbpl1Q80W15 270 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr1271Q8VG62 305 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Tmem190Q9D2E9 166 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Btbd17Q9DB72 478 aa12.75□□□□□ -0.37
Trim39-203ENSMUST00000113706 Ighv4-1A0A075B5R5 116 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Dlx4P70436 240 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 CenptQ3TJM4 515 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm26566Q8CAC1 153 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr816Q8VFU2 312 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr491Q8VG06 310 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Svep1A2AVA0 3567 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr1124A2AT86 318 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 AsmtD3KU66 387 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 TfpiO54819 306 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 GzmfP08883 248 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 SlpiP97430 131 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Patz1Q5NBY9 687 aaKnown RBP12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Spink6Q8BT20 105 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Prss41Q920S2 322 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Uqcc1Q9CWU6 295 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Spaca3Q9D9X8 221 aa12.74□□□□□ -0.37
Trim39-203ENSMUST00000113706 Rnf182Q8C432 247 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr1454Q8VFW2 307 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Vmn1r50Q9EP51 310 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Ammecr1Q9JHT5 344 aaKnown RBP12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Sptan1P16546 2472 aaKnown RBP12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Iba57Q8CAK1 358 aaKnown RBP12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Fam216bQ8CC14 138 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Derl1Q99J56 251 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Ssbp2Q9CYZ8 361 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr1016A2ASV2 309 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gata2O09100 480 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 CntfrO88507 372 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 FshbQ60687 130 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Aqp6Q8C4A0 293 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Ercc8Q8CFD5 397 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Commd9Q8K2Q0 198 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Vmn1r70Q8R254 298 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr968Q8VFN4 314 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Tm2d1Q99MB3 208 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Shisal2bQ9D1Y9 158 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Kcnip2Q9JJ69 270 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Osr1Q9WVG7 266 aa12.73□□□□□ -0.37
Trim39-203ENSMUST00000113706 Ctxnd2A0A1B0GQX3 59 aa12.72□□□□□ -0.37
Trim39-203ENSMUST00000113706 Platr25A0A1Y7VIZ1 466 aa12.72□□□□□ -0.37
Trim39-203ENSMUST00000113706 Irf2bp2E9Q1P8 570 aa12.72□□□□□ -0.37
Trim39-203ENSMUST00000113706 ErhP84089 104 aa12.72□□□□□ -0.37
Trim39-203ENSMUST00000113706 Foxn4Q8K3Q3 521 aa12.72□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr435Q8VFS3 313 aa12.72□□□□□ -0.37
Trim39-203ENSMUST00000113706 Fkbp11Q9D1M7 201 aa12.72□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gstp2P46425 210 aa12.72□□□□□ -0.37
Trim39-203ENSMUST00000113706 2810408A11RikQ6NSU2 435 aa12.72□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm20422E9PUR3 255 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr978E9Q985 311 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm4791J3QQ14 102 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 P01789 122 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Cdx1P18111 268 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Cox7a2P48771 83 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Pfn1P62962 140 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr1228Q8VGM9 323 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Polr3kQ9CQZ7 108 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 AmtnQ9D3J8 213 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm44596A0A0N4SVA0 210 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Zfp931A2AHM2 298 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Fgfbp1O70514 251 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 RhobP62746 196 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Sf3a2Q62203 475 aaKnown RBP12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr43Q7TRX1 313 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Olfr124Q8VGW6 315 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Kcnmb2Q9CZM9 235 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Vmn1r46Q9EQ45 309 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Zdhhc16Q9ESG8 361 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Hsd17b6Q9R092 317 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Col13a1Q9R1N9 751 aa12.71□□□□□ -0.37
Trim39-203ENSMUST00000113706 Gm9925F6T2U3 160 aa12.71□□□□□ -0.38
Trim39-203ENSMUST00000113706 Tnfsf11O35235 316 aa12.71□□□□□ -0.38
Trim39-203ENSMUST00000113706 LtaP09225 202 aa12.71□□□□□ -0.38
Trim39-203ENSMUST00000113706 Dnd1Q6VY05 352 aa12.71□□□□□ -0.38
Trim39-203ENSMUST00000113706 COA4Q8BT51 87 aa12.71□□□□□ -0.38
Trim39-203ENSMUST00000113706 Msrb3Q8BU85 253 aa12.71□□□□□ -0.38
Trim39-203ENSMUST00000113706 Tusc5Q8C838 173 aa12.71□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr1030Q8VFL5 318 aa12.71□□□□□ -0.38
Trim39-203ENSMUST00000113706 Fbxo25Q9D2Y6 357 aa12.71□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 80.2 ms