RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Tdrd6P61407 2134 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm14548E9Q1Z6 680 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Tnfsf11O35235 316 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm1553Q66VB7 94 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Srd5a2Q99N99 254 aa11.76□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Trav16nA0A075B634 117 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm21983D6RFS9 131 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Hist3h2bbQ8CGP0 126 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Olfr491Q8VG06 310 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gpx7Q99LJ6 186 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Hist3h2baQ9D2U9 126 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Sh2d6Q9D413 297 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Slamf6Q9ET39 351 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Phlda3Q9WV95 125 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 SeleQ00690 612 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Ube2zQ3UE37 356 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Olfr975Q8VG91 310 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 2200002J24RikQ9D807 110 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm20458E9PXJ7 78 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Foxc2Q61850 494 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Cela3bQ9CQ52 269 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Hcfc2Q9D968 241 aa11.75□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Trav6n-5A0A075B621 112 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Trav6-5A0A075B6B5 112 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm21616B6ZB74 166 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Atp5g2P56383 146 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Tm4sf20Q9CQY8 226 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 AY761184Q9D848 116 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Scgb1b2O35176 93 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 P18533 117 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Sfxn3Q91V61 321 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Tspan2Q922J6 221 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Tmem100Q9CQG9 134 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Lamtor2Q9JHS3 125 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Ighv5-4A0A075B5P9 117 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Wipf3P0C7L0 485 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm10842Q3U587 122 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Pate2Q3UW31 111 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Snx22Q8C084 192 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Slc25a28Q8R0Z5 364 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Mrps36Q9CQX8 102 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 IcosQ9WVS0 200 aa11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 PhipQ8VDD9 1821 aaKnown RBP11.74□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Mpv17P19258 176 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Cacng7P62956 275 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 UngP97931 306 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Plce1Q8K4S1 2282 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Tmprss12Q3V0Q7 336 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm20854Q62461 227 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Muc15Q8C6Z1 331 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Sh3bgrl3Q91VW3 93 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Cd200r1Q9ES57 326 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Myo10F8VQB6 2062 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Tmem241Q3UME2 297 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Fam19a2Q7TPG7 131 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Tmem129Q8K304 362 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Ifitm2Q99J93 144 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 OstcQ78XF5 149 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Rnase6Q9D244 153 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Q9DAZ5 108 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Prss22Q9ER10 306 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm4881A0A140LIR9 352 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm45521A0A1B0GRK0 198 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Smlr1J3QMJ4 66 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Bak1O08734 209 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Vmn1r54Q9EPB8 315 aa11.73□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Dkk1O54908 272 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm11232Q5SPI8 295 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Olfr1419Q7TQS2 343 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Q8VC23 124 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 4930583I09RikQ9D2E3 102 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Tspan13Q9D8C2 204 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Pilrb2Q2YFS1 225 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Prss58Q8BW11 241 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Urb1Q571H0 2274 aaKnown RBP11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 A0A1Y7VMQ4 148 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Slc25a53A2AF28 346 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Olfr484Q8VFD3 321 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Apc2Q9Z1K7 2274 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 TcraP01849 138 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Znf787Q8BIF9 381 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Kmt2eQ3UG20 1868 aa11.72□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Ca11O70354 328 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Adrb3P25962 400 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gstp2P46425 210 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Lime1Q9EQR5 269 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Ighv9-3A0A0B4J1J5 117 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Iglc3P01845 104 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 GchfrP99025 84 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Ripply2Q2WG76 128 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 D930007J09RikQ9D2K6 131 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Ighv1-15A0A0A6YXA5 117 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Iglv3A0A0B4J1K5 122 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Igkv6-25A0A140T8N7 115 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm7849D3YX03 116 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Gm17732E9Q5I2 61 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Ascl2O35885 263 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 PpyP10601 100 aa11.71□□□□□ -0.53
Col3a1-201ENSMUST00000087883 Defa16P50714 93 aa11.71□□□□□ -0.54
Col3a1-201ENSMUST00000087883 Q3UNZ8 350 aa11.71□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 82.2 ms