RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Smim14Q91VT8 99 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 RetnQ99P87 114 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ssbp1Q9CYR0 152 aaKnown RBP7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Fam213bQ9DB60 201 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm26992S4R1A3 76 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm14325A2AW67 498 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Amn1B8JKV0 258 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 MfngO09008 321 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Cox7a2lQ61387 111 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Sectm1aQ921W8 192 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Plb1Q3TTY0 1478 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm2381G3UY53 305 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm17577J3QNF7 156 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Rnase9P60154 184 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Tmem56Q8CGF5 276 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Tcf24V9GWT9 166 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Dennd4bQ3U1Y4 1499 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm20807A0A0A6YXX7 232 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 P01666 111 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 GzmcP08882 248 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Tpsab1Q02844 273 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Zic4Q61467 341 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Znf503Q7TMA2 652 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Hbb-bsA8DUK4 147 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm4894Q8CA09 118 aa7.32□□□□□ -1.24
Clcn3-202ENSMUST00000056508 AbraclQ4KML4 81 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Pygo2Q80V76 405 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Atoh7Q9Z2E5 149 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Zfp977L7N2E7 438 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Znf329Q6GQR8 522 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Zpld1Q8BGZ8 415 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 RetnlbQ99P86 105 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 RprmQ9JJ72 109 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Klf5Q9Z0Z7 446 aaKnown RBP7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Serp1Q9Z1W5 66 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Cul7Q8VE73 1689 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Lamc1P02468 1607 aaKnown RBP7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Znf664Q4VA44 261 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 CybaQ61462 192 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Olfr922Q8VG50 311 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gnb1lQ9EQ15 326 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Trbv14A0A140T8L9 115 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Sfxn3Q91V61 321 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 9230110F15RikQ9D262 117 aa7.31□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Setd1aE9PYH6 1716 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Mpv17lQ99MS3 194 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Lamc3Q9R0B6 1581 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ifitm7G3X9Z2 141 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ins2P01326 110 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Mbd5B1AYB6 1498 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 CycsP62897 105 aaKnown RBP7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Lrrc52Q5M8M9 314 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Arhgap23Q69ZH9 1483 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 P01665 111 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 P01728 117 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 NpyP57774 97 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Klhdc2Q4G5Y1 406 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm10334Q792Y8 246 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Prss3Q792Z0 246 aaKnown RBP7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ric1Q69ZJ7 1422 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 P01756 117 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Saa2P05367 122 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 AvpP35455 168 aa7.3□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Zfp931A2AHM2 298 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 P06321 130 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Tmem170bP86050 132 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Klhdc9Q3USL1 350 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Sval2Q99N75 144 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm20773A0A0A6YXW2 232 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm20873J3QMQ9 232 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm21310J3QQ23 232 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 MifP34884 115 aaKnown RBP7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm21440Q3TTD8 232 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Q3U595 105 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Vmn1r81Q8R286 306 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gpx4Q91XR9 253 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Cdk2ap2Q9CPY4 127 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Kiaa1210E9Q0C6 1637 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 4930451I11RikE9Q9R3 111 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Iqcf6G3UWF2 157 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 IghmP01872 454 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 CrygeQ03740 174 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm10735Q3US96 136 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Q9DAB9 146 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 SphkapQ6NSW3 1687 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ighv1-39A0A075B5V5 117 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm21900J3QP38 180 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 SdcbpO08992 299 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm12888Q3UW77 119 aa7.29□□□□□ -1.24
Clcn3-202ENSMUST00000056508 CfdP03953 259 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Mrps18cQ8R2L5 143 aaKnown RBP7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ighv1-54A0A075B5W5 117 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Gm29423A0A087WRM1 55 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Dio3Q91ZI8 304 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Ormdl3Q9CPZ6 153 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Nhp2Q9CRB2 153 aaKnown RBP7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 1700012A03RikQ9DAF1 130 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 AglF8VPN4 1532 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Trav12-3A0A075B648 115 aa7.28□□□□□ -1.24
Clcn3-202ENSMUST00000056508 Hbb-b1P02088 147 aa7.28□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms