RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Psg27Q497W2 474 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Vmn1r235Q8R297 328 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Rnase6Q9D244 153 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Greb1Q3UHK3 1954 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Trav16nA0A075B634 117 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Umad1E0CX23 159 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Zfp2P08043 459 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ssbp2Q9CYZ8 361 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Nup210lQ9D2F7 1881 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Med13Q5SWW4 2171 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Tex54G3UW99 86 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Rasl10bQ5SSG5 203 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Olfr1173Q7TR24 312 aa11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 PpifQ99KR7 206 aaKnown RBP11.89□□□□□ -0.51
Col5a1-201ENSMUST00000028280 C1qtnf9Q4ZJN1 333 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm21370Q3T9V6 190 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 A930017K11RikE0CXQ2 571 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Cox19Q8K0C8 92 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 MNCb-2875Q9DCB3 74 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Nit2Q9JHW2 276 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Tnfsf14Q9QYH9 239 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Tmem74bA2AU34 232 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 A6H6Q4 206 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 AsmtD3KU66 387 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Treml4Q3LRV9 263 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Olfr1419Q7TQS2 343 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Lhfpl6Q8BM86 200 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Tnfrsf12aQ9CR75 129 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Trav7-4A0A075B6C1 113 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Igfbp3P47878 292 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Trav7d-4Q5R1H9 113 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Olfr223Q8VF69 319 aa11.88□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Zic3Q62521 466 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Negr1Q80Z24 348 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Tmem129Q8K304 362 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Trav8-1A0A075B641 109 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Vwc2lQ505H4 222 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Srsf1Q6PDM2 248 aaKnown RBP11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 EppinQ9DA01 134 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Q9DAZ5 108 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 RetnlgQ8K426 117 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ighv1-67A0A0G2JFN9 117 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Lyl1P27792 278 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ca2P00920 260 aaKnown RBP11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 TtrP07309 147 aa11.87□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Igkv4-90A0A075B5L3 117 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ighv5-9A0A075B5Q2 117 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm21731A0A286YDE9 180 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 LipiF6YQT7 476 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 St6galnac2P70277 373 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Znf385aQ8VD12 386 aaKnown RBP11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Cisd3B1AR13 137 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 MavsQ8VCF0 503 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Zfpl1Q9DB43 310 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Sc5dO88822 299 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Saa3P04918 122 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Heatr5aQ5PRF0 2038 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Trav12-1A0N8R1 115 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Olfr559Q8VH14 318 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Sdk2Q6V4S5 2176 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Trav13n-4A0A0G2JG01 110 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ucp2P70406 309 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm9945Q8BNZ3 91 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Wdr31Q9JHB4 367 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 IcosQ9WVS0 200 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Klk1b4P00757 256 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ros1Q78DX7 2340 aa11.86□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Igkv10-94A0A075B5L1 115 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Mgst3Q9CPU4 153 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ntn3Q9R1A3 580 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 DysfQ9ESD7 2090 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Cdkn1bP46414 197 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Spint3Q3UW09 88 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 RflnaQ7TS73 204 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Nat6Q9R123 314 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Pglyrp3A1A547 347 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Adra2aQ01338 450 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Col4a1P02463 1669 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gstp2P46425 210 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Trbv15A0A0A6YYE3 115 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Nat8b-psE0CYC6 232 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm17727E9Q4V7 109 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Mrpl23O35972 146 aaKnown RBP11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ccl4P14097 92 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Lipt2Q9D009 231 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Sdk1Q3UH53 2193 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Trav6n-5A0A075B621 112 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Trav6-5A0A075B6B5 112 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Igkv6-20A0A140T8P2 115 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Il3raP26952 396 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm10283Q8C3L5 117 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Tctn3Q8R2Q6 595 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Ighv7-3A0A075B5R2 120 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm28269A0A087WSG3 125 aa11.85□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Shank3Q4ACU6 1730 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm29289A0A087WPY7 166 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm4064A0A087WR82 380 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Trbv1A0A0B4J1G7 116 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm10352B2RWR6 380 aa11.84□□□□□ -0.51
Col5a1-201ENSMUST00000028280 Gm21693J3QK27 380 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms