RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 P01787 123 aa13.75□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr143P34985 313 aa13.75□□□□□ -0.21
Ctcf-201ENSMUST00000005841 B4galt7Q8R087 327 aa13.75□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Mgst1Q91VS7 155 aa13.75□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Dctn5Q9QZB9 182 aa13.75□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Lgals9O08573 353 aaKnown RBP13.75□□□□□ -0.21
Ctcf-201ENSMUST00000005841 MiaQ61865 130 aa13.75□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Trav6-6A0A075B603 114 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Gm20458E9PXJ7 78 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Vipr2P41588 437 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Prss38Q3UKY7 322 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr1230Q8VG58 305 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 NpyP57774 97 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr1419Q7TQS2 343 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr963Q7TRA9 311 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Dppa2Q9CWH0 301 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Gm14214V9GX35 225 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Pkd1l3Q2EG98 2201 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Arhgef17Q80U35 2057 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Gm37388A0A0A6YY46 143 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 CtrlQ9ER05 264 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Ctnnbip1Q9JJN6 81 aa13.74□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Fcrl6A1YIY0 268 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 P01655 112 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr1356Q7TQU8 320 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr1181Q7TR18 311 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Harbi1Q8BR93 349 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Znf641Q8BZ34 422 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Ighv9-2A0A0B4J1J4 117 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Scgb1b19F6WYW0 93 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Ube2g1P62254 170 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Ankrd33bQ3U0L2 486 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Ociad2Q9D8W7 154 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Twist1P26687 206 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 CtsgP28293 261 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 B020031M17RikQ3UT11 173 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Defb46Q4QY34 57 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Bricd5Q8BV89 174 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr513Q8VFZ3 309 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Nhp2Q9CRB2 153 aaKnown RBP13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Crim1Q9JLL0 1037 aa13.73□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Mc5rP41149 325 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Bmp5P49003 452 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Zfp872Q3UVL3 465 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr1381Q7TQT4 311 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr1373Q7TQT6 311 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Ifna12Q80SS5 189 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Ms4a3Q920C4 213 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Tspo2Q9CRZ8 162 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 CnmdQ9Z1F6 334 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 P04940 107 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 P04941 107 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Mbnl2Q8C181 373 aaKnown RBP13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr1262Q8VGN2 304 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Immp1lQ9CQU8 166 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Gm6034E9Q101 117 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Gm21874J3QNZ6 232 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Gata2O09100 480 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 MyadmO35682 320 aaKnown RBP13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 SgcbP82349 320 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Duxbl2Q7TNE6 350 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Zfp874aQ8BX23 447 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Ssbp2Q9CYZ8 361 aa13.72□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Rpl8P62918 257 aaKnown RBP13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Gm10840Q3V2K9 103 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Ifna11Q61716 190 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr1199Q8VF94 310 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Oxld1Q9CR10 201 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Cend1Q9JKC6 149 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Syngr4Q9Z1L2 233 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Zfhx4Q9JJN2 3550 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 TroQ6DIC6 2087 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Trav14n-3A0A075B645 120 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Hoxa1P09022 331 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Olfr150Q60895 312 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Usf1Q61069 310 aa13.71□□□□□ -0.21
Ctcf-201ENSMUST00000005841 Rpp30O88796 268 aaKnown RBP13.71□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Sox15P43267 231 aa13.71□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Lrfn3Q8BLY3 626 aa13.71□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Siglec12Q91Y57 467 aa13.71□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Fancd2osQ9D4K4 178 aa13.71□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Pxmp4Q9JJW0 212 aa13.71□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Zfhx2Q2MHN3 2562 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Ccl1P10146 92 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Rab30Q923S9 203 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Zfp407G3UVV3 2246 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Zfhx3Q61329 3726 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Gcm1P70348 436 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Hcfc2Q9D968 241 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Ighv5-16A0A0B4J1P4 117 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Tpsab1Q02844 273 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Spsb3Q571F5 354 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Defb36Q8K3U4 67 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Mrpl3Q99N95 348 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Tmed6Q9CQG0 239 aa13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Fam103a1Q9CQY2 119 aaKnown RBP13.7□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Znf385cA2A5E6 429 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 Nat8f4G5E8L3 226 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 CebpgP53568 150 aa13.69□□□□□ -0.22
Ctcf-201ENSMUST00000005841 AmelxP63277 210 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms