RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 SpegQ62407 3262 aa15.23■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Vmn1r149E9PWL6 307 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Vmn1r101E9Q365 307 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Vmn1r158G3UY92 307 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Tnfaip6O08859 275 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Hoxa1P09022 331 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Gm10842Q3U587 122 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Oraov1Q8CH62 137 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Olfr1265Q8VEZ3 309 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Olfr577Q8VH11 312 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Mgst1Q91VS7 155 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Tnfrsf13cQ9D8D0 175 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Cxcr6Q9EQ16 351 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Igkv1-131A0A140T8M8 120 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 P04943 107 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Hoxa6P09092 232 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Ccl3P10855 92 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 RanP62827 216 aaKnown RBP15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Slc35b1P97858 322 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Tpsab1Q02844 273 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Q0VG62 139 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 B3gnt9Q8VI16 399 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Tpsg1Q9QUL7 311 aa15.22■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Tcrg-V4A0A0B4J1J8 138 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Gm6993A0A1W2P738 69 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Scgb2a2J3KMP9 96 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 P01649 108 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Ccl2P10148 148 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Ighv3-6P18531 116 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Nutf2P61971 127 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Ms4a13Q5FWC3 203 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Tmem204Q7TQI0 226 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 4930412O13RikQ9D5M9 106 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Nudt3Q9JI46 168 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Pcnx1Q9QYC1 2344 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Gm21775J3KMK6 180 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Rab33bO35963 229 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Sumo1P63166 101 aaKnown RBP15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 SnrpcQ62241 159 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Znrd1Q791N7 123 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Olfr859Q7TRF5 309 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 4930583I09RikQ9D2E3 102 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 AmtnQ9D3J8 213 aa15.21■□□□□ 0.03
Shkbp1-201ENSMUST00000003857 Gm44596A0A0N4SVA0 210 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Olfr177E9Q7W1 309 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Ccl1P10146 92 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Smim9Q3V0X1 137 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 CrhQ8CIT0 187 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Olfr476Q8VGI4 310 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Olfr33Q8VGX7 318 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 EpcamQ99JW5 315 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Mapk1ip1Q9D7G9 263 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Shank1D3YZU1 2167 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 F2rl2O08675 369 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 LfngO09010 378 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gnb4P29387 340 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Hes1P35428 282 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Sox15P43267 231 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 GchfrP99025 84 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Fxyd3Q61835 88 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 TslpQ9JIE6 140 aa15.2■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Ighv1-39A0A075B5V5 117 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Trav7-4A0A075B6C1 113 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm5093E9PZB3 174 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Rpl27aP14115 148 aaKnown RBP15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gimap1P70224 277 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 MymxQ2Q5T5 84 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Trav7d-4Q5R1H9 113 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Rgs13Q8K443 158 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Olfr492Q8VFD1 314 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Hdgfl3Q9JMG7 202 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 FetubQ9QXC1 388 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Cacna1hO88427 2365 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 B2mP01887 119 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Acrv1P50289 261 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Znf329Q6GQR8 522 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Vmn1r50Q9EP51 310 aa15.19■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Trav13n-4A0A0G2JG01 110 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm15127B1AVZ5 449 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm15091B1AZM2 449 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Mmp23O88676 391 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Q3U1D9 316 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Cd200r3Q5UKY4 296 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Slc36a4Q8CH36 500 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Zg16Q8K0C5 167 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 4933414I15RikQ9D4D5 133 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 PigpQ9JHG1 132 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Rpl8P62918 257 aaKnown RBP15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Pdlim4P70271 330 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 KncnQ307W7 124 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Ccl12Q62401 104 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Dlx1Q64317 255 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 SriQ6P069 198 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gucd1Q8BZI6 239 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Olfr1462Q8VFW3 307 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Olfr1271Q8VG62 305 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Timm10bQ9WV96 100 aa15.18■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 AcacaQ5SWU9 2345 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm15128A2ADW8 449 aa15.17■□□□□ 0.02
Shkbp1-201ENSMUST00000003857 Gm15080A2BI02 449 aa15.17■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 70.4 ms