RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 PSCAO43653 123 aa16.96■□□□□ 0.31
VEGFA-232ENST00000640653 IGHV3-30P01768 117 aa16.96■□□□□ 0.31
VEGFA-232ENST00000640653 IGHV3-33P01772 117 aa16.96■□□□□ 0.31
VEGFA-232ENST00000640653 IGHV3-30-3P0DP02 117 aa16.96■□□□□ 0.31
VEGFA-232ENST00000640653 IGHV3-30-5P0DP03 117 aa16.96■□□□□ 0.31
VEGFA-232ENST00000640653 BAGE2Q86Y30 109 aa16.96■□□□□ 0.31
VEGFA-232ENST00000640653 EIF5AL1Q6IS14 154 aaKnown RBP16.95■□□□□ 0.3
VEGFA-232ENST00000640653 MANBALQ9NQG1 85 aa16.95■□□□□ 0.3
VEGFA-232ENST00000640653 A0A087WWL8 130 aa16.94■□□□□ 0.3
VEGFA-232ENST00000640653 RAB5CP51148 216 aa16.94■□□□□ 0.3
VEGFA-232ENST00000640653 MLST8Q9BVC4 326 aa16.94■□□□□ 0.3
VEGFA-232ENST00000640653 KRTAP4-5Q9BYR2 181 aa16.94■□□□□ 0.3
VEGFA-232ENST00000640653 APOBP04114 4563 aaKnown RBP16.94■□□□□ 0.3
VEGFA-232ENST00000640653 A0A087WWC5 75 aa16.93■□□□□ 0.3
VEGFA-232ENST00000640653 FUSP35637 526 aaKnown RBP eCLIP16.93■□□□□ 0.33e-8■□□□□ 10.5
VEGFA-232ENST00000640653 Q9HAA7 133 aa16.93■□□□□ 0.3
VEGFA-232ENST00000640653 TEX46H3BTG2 121 aa16.92■□□□□ 0.3
VEGFA-232ENST00000640653 CXCL1P09341 107 aa16.92■□□□□ 0.3
VEGFA-232ENST00000640653 LAGE3Q14657 143 aa16.92■□□□□ 0.3
VEGFA-232ENST00000640653 GNG13Q9P2W3 67 aa16.92■□□□□ 0.3
VEGFA-232ENST00000640653 Q9UF83 564 aa16.92■□□□□ 0.3
VEGFA-232ENST00000640653 TRAV1-1A0A0B4J248 108 aa16.91■□□□□ 0.3
VEGFA-232ENST00000640653 Q8N1X5 172 aa16.91■□□□□ 0.3
VEGFA-232ENST00000640653 RPL19P84098 196 aaKnown RBP16.9■□□□□ 0.3
VEGFA-232ENST00000640653 PRR27Q6MZM9 219 aa16.9■□□□□ 0.3
VEGFA-232ENST00000640653 TCTE3Q8IZS6 198 aa16.9■□□□□ 0.3
VEGFA-232ENST00000640653 TRBV10-1A0A0K0K1A3 114 aa16.89■□□□□ 0.29
VEGFA-232ENST00000640653 RPL35P42766 123 aaKnown RBP16.89■□□□□ 0.29
VEGFA-232ENST00000640653 CCL20P78556 96 aa16.89■□□□□ 0.29
VEGFA-232ENST00000640653 C11orf52Q96A22 123 aa16.88■□□□□ 0.29
VEGFA-232ENST00000640653 SULT1A2P50226 295 aa16.87■□□□□ 0.29
VEGFA-232ENST00000640653 TM2D2Q9BX73 214 aa16.87■□□□□ 0.29
VEGFA-232ENST00000640653 LRCOL1A6NCL2 159 aa16.86■□□□□ 0.29
VEGFA-232ENST00000640653 RPL36AP83881 106 aaKnown RBP16.86■□□□□ 0.29
VEGFA-232ENST00000640653 OR10AG1Q8NH19 301 aa16.86■□□□□ 0.29
VEGFA-232ENST00000640653 RPL36ALQ969Q0 106 aaKnown RBP16.86■□□□□ 0.29
VEGFA-232ENST00000640653 TRAV8-3A0A0A6YYJ7 113 aa16.85■□□□□ 0.29
VEGFA-232ENST00000640653 SNAI2O43623 268 aa16.85■□□□□ 0.29
VEGFA-232ENST00000640653 OR5AL1P0C617 328 aa16.85■□□□□ 0.29
VEGFA-232ENST00000640653 TOR2AQ5JU69 321 aa16.85■□□□□ 0.29
VEGFA-232ENST00000640653 SPANXN1Q5VSR9 72 aa16.85■□□□□ 0.29
VEGFA-232ENST00000640653 Q8N3U1 123 aa16.85■□□□□ 0.29
VEGFA-232ENST00000640653 DERL1Q9BUN8 251 aa16.85■□□□□ 0.29
VEGFA-232ENST00000640653 URGCP-MRPS24S4R325 110 aa16.85■□□□□ 0.29
VEGFA-232ENST00000640653 RAB4BP61018 213 aa16.84■□□□□ 0.29
VEGFA-232ENST00000640653 SLC51BQ86UW2 128 aa16.84■□□□□ 0.29
VEGFA-232ENST00000640653 NTN5Q8WTR8 489 aaPredicted RBP16.84■□□□□ 0.29
VEGFA-232ENST00000640653 SSBP4Q9BWG4 385 aaPredicted RBP16.84■□□□□ 0.29
VEGFA-232ENST00000640653 ABCA13Q86UQ4 5058 aa16.84■□□□□ 0.29
VEGFA-232ENST00000640653 TRBV7-3A0A075B6L6 115 aa16.83■□□□□ 0.28
VEGFA-232ENST00000640653 IFNA1P01562 189 aa16.83■□□□□ 0.28
VEGFA-232ENST00000640653 C1QBP02746 253 aa16.83■□□□□ 0.28
VEGFA-232ENST00000640653 GCSHP23434 173 aa16.83■□□□□ 0.28
VEGFA-232ENST00000640653 KRTAP10-1P60331 282 aa16.83■□□□□ 0.28
VEGFA-232ENST00000640653 ZNF56Q15929 161 aa16.83■□□□□ 0.28
VEGFA-232ENST00000640653 DAZ4Q86SG3 579 aaKnown RBP16.83■□□□□ 0.28
VEGFA-232ENST00000640653 DAZ3Q9NR90 486 aaKnown RBP16.83■□□□□ 0.28
VEGFA-232ENST00000640653 CENPWQ5EE01 88 aa16.82■□□□□ 0.28
VEGFA-232ENST00000640653 IGLV5-52A0A0A0MRZ9 124 aa16.81■□□□□ 0.28
VEGFA-232ENST00000640653 PDE6DO43924 150 aa16.81■□□□□ 0.28
VEGFA-232ENST00000640653 UBE2D3P61077 147 aa16.81■□□□□ 0.28
VEGFA-232ENST00000640653 UBE2D2P62837 147 aa16.81■□□□□ 0.28
VEGFA-232ENST00000640653 MEF2BQ02080 365 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-232ENST00000640653 Q8N814 137 aa16.81■□□□□ 0.28
VEGFA-232ENST00000640653 OR10G8Q8NGN5 311 aa16.81■□□□□ 0.28
VEGFA-232ENST00000640653 DAZAP1Q96EP5 407 aaKnown RBP16.81■□□□□ 0.28
VEGFA-232ENST00000640653 MUC21A0A0G2JKD1 596 aa16.8■□□□□ 0.28
VEGFA-232ENST00000640653 MUC21A0A140T8X8 626 aa16.8■□□□□ 0.28
VEGFA-232ENST00000640653 NIT1Q86X76 327 aa16.8■□□□□ 0.28
VEGFA-232ENST00000640653 SMIM12Q96EX1 92 aa16.8■□□□□ 0.28
VEGFA-232ENST00000640653 KCNIP4Q6PIL6 250 aa16.79■□□□□ 0.28
VEGFA-232ENST00000640653 SMIM17P0DL12 118 aa16.78■□□□□ 0.28
VEGFA-232ENST00000640653 GNG4P50150 75 aa16.78■□□□□ 0.28
VEGFA-232ENST00000640653 Q6ZNX1 250 aa16.78■□□□□ 0.28
VEGFA-232ENST00000640653 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-232ENST00000640653 CHCHD7Q9BUK0 85 aa16.78■□□□□ 0.28
VEGFA-232ENST00000640653 COX11Q9Y6N1 276 aa16.78■□□□□ 0.28
VEGFA-232ENST00000640653 A0A087WX48 190 aa16.77■□□□□ 0.28
VEGFA-232ENST00000640653 IGLV2-8P01709 118 aa16.77■□□□□ 0.28
VEGFA-232ENST00000640653 XGP55808 180 aa16.77■□□□□ 0.28
VEGFA-232ENST00000640653 RPS20P60866 119 aaKnown RBP16.77■□□□□ 0.28
VEGFA-232ENST00000640653 SSTP61278 116 aa16.77■□□□□ 0.28
VEGFA-232ENST00000640653 NEXN-AS1Q8NBZ9 246 aa16.77■□□□□ 0.28
VEGFA-232ENST00000640653 RMI2Q96E14 147 aa16.77■□□□□ 0.28
VEGFA-232ENST00000640653 AP1S3Q96PC3 154 aa16.77■□□□□ 0.28
VEGFA-232ENST00000640653 RAB19A4D1S5 217 aa16.76■□□□□ 0.27
VEGFA-232ENST00000640653 F5H697 171 aa16.76■□□□□ 0.27
VEGFA-232ENST00000640653 BCL2P10415 239 aa16.76■□□□□ 0.27
VEGFA-232ENST00000640653 ELOBQ15370 118 aa16.76■□□□□ 0.27
VEGFA-232ENST00000640653 OR2D3Q8NGH3 330 aa16.76■□□□□ 0.27
VEGFA-232ENST00000640653 MED9Q9NWA0 146 aa16.76■□□□□ 0.27
VEGFA-232ENST00000640653 TAGLN2P37802 199 aaKnown RBP16.75■□□□□ 0.27
VEGFA-232ENST00000640653 BIN3Q9NQY0 253 aa16.75■□□□□ 0.27
VEGFA-232ENST00000640653 VAX2Q9UIW0 290 aa16.75■□□□□ 0.27
VEGFA-232ENST00000640653 XKRY2A2RUG3 117 aa16.74■□□□□ 0.27
VEGFA-232ENST00000640653 C19orf71A6NCJ1 209 aa16.74■□□□□ 0.27
VEGFA-232ENST00000640653 AKAP14Q86UN6 197 aa16.74■□□□□ 0.27
VEGFA-232ENST00000640653 FER1L6-AS1Q8NA97 138 aa16.74■□□□□ 0.27
VEGFA-232ENST00000640653 TPPP3Q9BW30 176 aa16.74■□□□□ 0.27
VEGFA-232ENST00000640653 KLK12Q9UKR0 248 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms