RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 UBE2AP49459 152 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 EFNA4P52798 201 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 ERCC8Q13216 396 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 C14orf178Q8N769 122 aaPredicted RBP6.44□□□□□ -1.38
NECAP1-227ENST00000640648 SRRM4A7MD48 611 aaKnown RBP6.44□□□□□ -1.38
NECAP1-227ENST00000640648 NBL1P41271 181 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 ZNF833PQ6ZTB9 187 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 DPH3Q96FX2 82 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 C9orf85Q96MD7 179 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 GDF5OSQ5U4N7 250 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 RETNQ9HD89 108 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 RNF114Q9Y508 228 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 PTPN13Q12923 2485 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 EML6Q6ZMW3 1958 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 INSL3P51460 131 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 NDPQ00604 133 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 NEXN-AS1Q8NBZ9 246 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 MBD3L2Q8NHZ7 208 aaPredicted RBP6.43□□□□□ -1.38
NECAP1-227ENST00000640648 IGHV3-64A0A075B6Q5 118 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 IGKV3D-20A0A0C4DH25 116 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 C15orf65H3BRN8 121 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 KRTAP27-1Q3LI81 207 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 TPSG1Q9NRR2 321 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 C2CD3Q4AC94 2353 aa6.43□□□□□ -1.38
NECAP1-227ENST00000640648 KIF26AQ9ULI4 1882 aaPredicted RBP6.43□□□□□ -1.38
NECAP1-227ENST00000640648 MBD3L4A6NDZ8 208 aaPredicted RBP6.42□□□□□ -1.38
NECAP1-227ENST00000640648 MBD3L3A6NE82 208 aaPredicted RBP6.42□□□□□ -1.38
NECAP1-227ENST00000640648 MBD3L5A6NJ08 208 aaPredicted RBP6.42□□□□□ -1.38
NECAP1-227ENST00000640648 IGHV3-30P01768 117 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 IGHV3-30-5P0DP03 117 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 WT1-ASQ06250 92 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 C17orf58Q2M2W7 97 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 HIST2H2BCQ6DN03 193 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 HIST2H2BDQ6DRA6 164 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 UPK3BQ9BT76 320 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 A0A0G2JNJ9 132 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 PLA2G5P39877 138 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 Q9UFV3 132 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 PIEZO2Q9H5I5 2752 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 BUB1B-PAK6H3BSN5 160 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 CRYGDP07320 174 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 RPL36AP83881 106 aaKnown RBP6.42□□□□□ -1.38
NECAP1-227ENST00000640648 DAZ2Q13117 558 aaKnown RBP6.42□□□□□ -1.38
NECAP1-227ENST00000640648 RPL36ALQ969Q0 106 aaKnown RBP6.42□□□□□ -1.38
NECAP1-227ENST00000640648 MRPL36Q9P0J6 103 aaKnown RBP6.42□□□□□ -1.38
NECAP1-227ENST00000640648 MUC6Q6W4X9 2439 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 EGR2P11161 476 aaPredicted RBP6.42□□□□□ -1.38
NECAP1-227ENST00000640648 RPL35AP18077 110 aaKnown RBP6.42□□□□□ -1.38
NECAP1-227ENST00000640648 CD164Q04900 197 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 DIAPH2-AS1Q14236 149 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 MED12LQ86YW9 2145 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 C7orf69Q9H7B7 122 aa6.42□□□□□ -1.38
NECAP1-227ENST00000640648 CUL9Q8IWT3 2517 aa6.41□□□□□ -1.38
NECAP1-227ENST00000640648 IGHV1-58A0A0C4DH39 117 aa6.41□□□□□ -1.38
NECAP1-227ENST00000640648 C8orf49Q96NF6 230 aa6.41□□□□□ -1.38
NECAP1-227ENST00000640648 SPRY4Q9C004 299 aa6.41□□□□□ -1.38
NECAP1-227ENST00000640648 CMC4P56277 68 aaPredicted RBP6.41□□□□□ -1.38
NECAP1-227ENST00000640648 A0A0U1RRA0 63 aa6.41□□□□□ -1.38
NECAP1-227ENST00000640648 DAZ4Q86SG3 579 aaKnown RBP6.41□□□□□ -1.38
NECAP1-227ENST00000640648 SIRPDQ9H106 197 aa6.41□□□□□ -1.38
NECAP1-227ENST00000640648 DAZ3Q9NR90 486 aaKnown RBP6.41□□□□□ -1.38
NECAP1-227ENST00000640648 TOMM7Q9P0U1 55 aa6.41□□□□□ -1.38
NECAP1-227ENST00000640648 PRO0461Q9UI25 63 aa6.41□□□□□ -1.38
NECAP1-227ENST00000640648 PAX8Q06710 450 aa6.4□□□□□ -1.38
NECAP1-227ENST00000640648 C3orf36Q3SXR2 165 aa6.4□□□□□ -1.38
NECAP1-227ENST00000640648 VMO1Q7Z5L0 202 aa6.4□□□□□ -1.38
NECAP1-227ENST00000640648 WFDC11Q8NEX6 87 aa6.4□□□□□ -1.38
NECAP1-227ENST00000640648 MYO18BQ8IUG5 2567 aa6.4□□□□□ -1.39
NECAP1-227ENST00000640648 UBE2E1P51965 193 aa6.4□□□□□ -1.39
NECAP1-227ENST00000640648 ITLN2Q8WWU7 325 aaPredicted RBP6.4□□□□□ -1.39
NECAP1-227ENST00000640648 AJUBAQ96IF1 538 aa6.4□□□□□ -1.39
NECAP1-227ENST00000640648 CCL19Q99731 98 aa6.4□□□□□ -1.39
NECAP1-227ENST00000640648 DKK1O94907 266 aa6.39□□□□□ -1.39
NECAP1-227ENST00000640648 FRMD6-AS1P0C7T7 363 aa6.39□□□□□ -1.39
NECAP1-227ENST00000640648 APRG1Q8IVJ8 170 aa6.39□□□□□ -1.39
NECAP1-227ENST00000640648 LINC01587Q99440 93 aa6.39□□□□□ -1.39
NECAP1-227ENST00000640648 PYGO1Q9Y3Y4 419 aa6.39□□□□□ -1.39
NECAP1-227ENST00000640648 TMEM263Q8WUH6 116 aaKnown RBP6.39□□□□□ -1.39
NECAP1-227ENST00000640648 TRIAP1O43715 76 aa6.39□□□□□ -1.39
NECAP1-227ENST00000640648 ZNF295-AS1Q8N0V1 137 aa6.39□□□□□ -1.39
NECAP1-227ENST00000640648 DNAH12Q6ZR08 3092 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 FAM223BA6NKX1 122 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 MINOS1Q5TGZ0 78 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 BRD3OSQ6XYD6 125 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 FAM223AQ8IWN6 122 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 C11orf53Q8IXP5 236 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 MINOS1-NBL1R4GNA1 71 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 E7EQL1 145 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 NFE4Q86UQ8 179 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 TMEM61Q8N0U2 210 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 OPRPNQ99935 248 aaPredicted RBP6.38□□□□□ -1.39
NECAP1-227ENST00000640648 NACAE9PAV3 2078 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 IGKV2D-26A0A0A0MRZ7 120 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 PLAC8L1A1L4L8 177 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 H7C423 109 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 HHLA3Q9XRX5 114 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 MYCNOSP40205 109 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 SPRNQ5BIV9 151 aa6.38□□□□□ -1.39
NECAP1-227ENST00000640648 NUP210Q8TEM1 1887 aaPredicted RBP6.37□□□□□ -1.39
NECAP1-227ENST00000640648 ZNF625Q96I27 306 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms