RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 ZNF737O75373 536 aa4.85□□□□□ -1.63
NECAP1-220ENST00000639841 IGLV3-1P01715 115 aa4.85□□□□□ -1.63
NECAP1-220ENST00000639841 TRGV3P03979 118 aa4.85□□□□□ -1.63
NECAP1-220ENST00000639841 LINC01590Q5TEZ4 76 aa4.85□□□□□ -1.63
NECAP1-220ENST00000639841 AMTNQ6UX39 209 aa4.85□□□□□ -1.63
NECAP1-220ENST00000639841 NR2C2APQ86WQ0 139 aa4.85□□□□□ -1.63
NECAP1-220ENST00000639841 LYPD6Q86Y78 171 aa4.85□□□□□ -1.63
NECAP1-220ENST00000639841 NAA38Q9BRA0 125 aaKnown RBP4.85□□□□□ -1.63
NECAP1-220ENST00000639841 HILPDAQ9Y5L2 63 aa4.85□□□□□ -1.63
NECAP1-220ENST00000639841 IGHV1-3A0A0C4DH29 117 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 CSN1S1P47710 185 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 VEGFCP49767 419 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 LINC01554Q52M75 96 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 SLC35E3Q7Z769 313 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 TRAPPC6BQ86SZ2 158 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 ZNF329Q86UD4 541 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 DYNAPQ8N1N2 210 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 C3orf22Q8N5N4 141 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 C4orf3Q8WVX3 66 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 GABARAPL1Q9H0R8 117 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 NIT2Q9NQR4 276 aa4.84□□□□□ -1.63
NECAP1-220ENST00000639841 TMEM256-PLSCR3K7ERE1 68 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 IGKV1D-33P01593 117 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 IGKV1-33P01594 117 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 IGLV1-47P01700 117 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 RPS27P42677 84 aaKnown RBP4.84□□□□□ -1.64
NECAP1-220ENST00000639841 PRB3Q04118 309 aaPredicted RBP4.84□□□□□ -1.64
NECAP1-220ENST00000639841 TMEM69Q5SWH9 247 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 BCL2L15Q5TBC7 163 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 GLIPR1L1Q6UWM5 242 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 PP6455Q8WZ26 134 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 PDCD10Q9BUL8 212 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 C11orf1Q9H5F2 150 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 V9GYS6 101 aa4.84□□□□□ -1.64
NECAP1-220ENST00000639841 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
NECAP1-220ENST00000639841 KMT2CQ8NEZ4 4911 aaKnown RBP4.83□□□□□ -1.64
NECAP1-220ENST00000639841 A0A1B0GVG6 124 aa4.83□□□□□ -1.64
NECAP1-220ENST00000639841 A0A1B0GW54 56 aa4.83□□□□□ -1.64
NECAP1-220ENST00000639841 C20orf202A1L168 122 aa4.83□□□□□ -1.64
NECAP1-220ENST00000639841 K7ERS5 55 aa4.83□□□□□ -1.64
NECAP1-220ENST00000639841 CXCL1P09341 107 aa4.83□□□□□ -1.64
NECAP1-220ENST00000639841 ATP6V0CP27449 155 aa4.83□□□□□ -1.64
NECAP1-220ENST00000639841 CRIP2P52943 208 aaPredicted RBP4.83□□□□□ -1.64
NECAP1-220ENST00000639841 AP1S3Q96PC3 154 aa4.83□□□□□ -1.64
NECAP1-220ENST00000639841 LINC00574Q9H8X3 128 aa4.83□□□□□ -1.64
NECAP1-220ENST00000639841 TRBV7-6A0A0J9YX20 115 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 PIPP12273 146 aaPredicted RBP4.82□□□□□ -1.64
NECAP1-220ENST00000639841 NPPCP23582 126 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 AKR1D1P51857 326 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 SAXO1Q8IYX7 474 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 C5orf56Q8N8D9 126 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 HIST1H2BAQ96A08 127 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 TTTY13Q9BZ97 58 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 GPX1P07203 203 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 PTHLHP12272 177 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 SDC2P34741 201 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 ZNF816Q0VGE8 651 aaPredicted RBP4.82□□□□□ -1.64
NECAP1-220ENST00000639841 EBI3Q14213 229 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 OR8D4Q8NGM9 314 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 R4GMQ9 66 aa4.82□□□□□ -1.64
NECAP1-220ENST00000639841 STAB2Q8WWQ8 2551 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 A6NED7 52 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 ZNF670-ZNF695F2Z2N8 137 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 LEPROTO15243 131 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 NAPSAO96009 420 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 GYPBP06028 91 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 IGHV3-30-3P0DP02 117 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 MRPS10P82664 201 aaKnown RBP4.81□□□□□ -1.64
NECAP1-220ENST00000639841 FAAP20Q6NZ36 180 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 TCTEX1D1Q8N7M0 179 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 SLC25A46Q96AG3 418 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 CST9LQ9H4G1 147 aa4.81□□□□□ -1.64
NECAP1-220ENST00000639841 DYNC2H1Q8NCM8 4307 aaKnown RBP4.81□□□□□ -1.64
NECAP1-220ENST00000639841 HRASP01112 189 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 KRASP01116 189 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 IGKV1-16P04430 117 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 RBM11P57052 281 aaKnown RBP4.8□□□□□ -1.64
NECAP1-220ENST00000639841 HES1Q14469 280 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 KISS1Q15726 138 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 LDLRAD2Q5SZI1 272 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 UPK3BQ9BT76 320 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 CST11Q9H112 138 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 IGHV1-58A0A0C4DH39 117 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 A0A0J9YWU9 116 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 TMEM212A6NML5 194 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 J3QR89 54 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 LECT2O14960 151 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 LGALS3P17931 250 aaKnown RBP4.8□□□□□ -1.64
NECAP1-220ENST00000639841 HIGD2BQ4VC39 106 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 LINC00311Q8N616 119 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 TERB2Q8NHR7 220 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 MYOZ3Q8TDC0 251 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 RBPMSQ93062 196 aaKnown RBP4.8□□□□□ -1.64
NECAP1-220ENST00000639841 AMELYQ99218 206 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 TAF9BQ9HBM6 251 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 SCN3BQ9NY72 215 aa4.8□□□□□ -1.64
NECAP1-220ENST00000639841 IRGMA1A4Y4 181 aa4.79□□□□□ -1.64
NECAP1-220ENST00000639841 GGCTO75223 188 aaKnown RBP4.79□□□□□ -1.64
NECAP1-220ENST00000639841 TFF1P04155 84 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms