RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 NIPBLQ6KC79 2804 aaeCLIP14.03□□□□□ -0.16
CLN5-219ENST00000637537 IGKV2D-26A0A0A0MRZ7 120 aa14.03□□□□□ -0.16
CLN5-219ENST00000637537 E9PLD3 99 aa14.03□□□□□ -0.16
CLN5-219ENST00000637537 J3QR89 54 aa14.03□□□□□ -0.16
CLN5-219ENST00000637537 K7ERJ3 54 aa14.03□□□□□ -0.16
CLN5-219ENST00000637537 RNASE4P34096 147 aaKnown RBP14.03□□□□□ -0.16
CLN5-219ENST00000637537 MRPL51Q4U2R6 128 aaKnown RBP14.03□□□□□ -0.16
CLN5-219ENST00000637537 FOXC2Q99958 501 aa14.03□□□□□ -0.16
CLN5-219ENST00000637537 CHAC1Q9BUX1 264 aa14.03□□□□□ -0.16
CLN5-219ENST00000637537 WFDC2Q14508 124 aa14.03□□□□□ -0.16
CLN5-219ENST00000637537 OR11H1Q8NG94 326 aa14.03□□□□□ -0.16
CLN5-219ENST00000637537 TM2D2Q9BX73 214 aa14.03□□□□□ -0.16
CLN5-219ENST00000637537 SMR3AQ99954 134 aa14.02□□□□□ -0.16
CLN5-219ENST00000637537 HHLA3Q9XRX5 114 aa14.02□□□□□ -0.16
CLN5-219ENST00000637537 LENEPQ9Y5L5 61 aa14.02□□□□□ -0.17
CLN5-219ENST00000637537 GAS8-AS1O95177 125 aa14.01□□□□□ -0.17
CLN5-219ENST00000637537 CNFNQ9BYD5 112 aa14.01□□□□□ -0.17
CLN5-219ENST00000637537 LGALS9O00182 355 aa14.01□□□□□ -0.17
CLN5-219ENST00000637537 IGKV3-20P01619 116 aa14.01□□□□□ -0.17
CLN5-219ENST00000637537 ID1P41134 155 aa14.01□□□□□ -0.17
CLN5-219ENST00000637537 H3BVH4 76 aa14□□□□□ -0.17
CLN5-219ENST00000637537 CEND1Q8N111 149 aa14□□□□□ -0.17
CLN5-219ENST00000637537 FAM19A4Q96LR4 140 aa14□□□□□ -0.17
CLN5-219ENST00000637537 SPAG8Q99932 426 aaPredicted RBP14□□□□□ -0.17
CLN5-219ENST00000637537 NPYP01303 97 aa14□□□□□ -0.17
CLN5-219ENST00000637537 ODF1Q14990 250 aa14□□□□□ -0.17
CLN5-219ENST00000637537 TMEM86BQ8N661 226 aa14□□□□□ -0.17
CLN5-219ENST00000637537 OTOGQ6ZRI0 2925 aa14□□□□□ -0.17
CLN5-219ENST00000637537 TRBV25-1A0A075B6N4 114 aa13.99□□□□□ -0.17
CLN5-219ENST00000637537 IGLL5B9A064 214 aa13.99□□□□□ -0.17
CLN5-219ENST00000637537 KLHL30-AS1Q8NEE0 82 aa13.99□□□□□ -0.17
CLN5-219ENST00000637537 TTTY13Q9BZ97 58 aa13.99□□□□□ -0.17
CLN5-219ENST00000637537 NHP2Q9NX24 153 aaKnown RBP13.99□□□□□ -0.17
CLN5-219ENST00000637537 LINC01546A6NGU7 62 aa13.99□□□□□ -0.17
CLN5-219ENST00000637537 EVI2AP22794 236 aa13.99□□□□□ -0.17
CLN5-219ENST00000637537 CKS2P33552 79 aa13.98□□□□□ -0.17
CLN5-219ENST00000637537 TEX29Q8N6K0 151 aa13.98□□□□□ -0.17
CLN5-219ENST00000637537 RNF185Q96GF1 192 aa13.98□□□□□ -0.17
CLN5-219ENST00000637537 HIVEP2P31629 2446 aa13.98□□□□□ -0.17
CLN5-219ENST00000637537 TRAV21A0A0B4J279 112 aa13.98□□□□□ -0.17
CLN5-219ENST00000637537 ANXA2RQ3ZCQ2 193 aa13.98□□□□□ -0.17
CLN5-219ENST00000637537 LINC01619G3V211 115 aa13.97□□□□□ -0.17
CLN5-219ENST00000637537 K7EQG2 157 aa13.97□□□□□ -0.17
CLN5-219ENST00000637537 HLA-DRB4P13762 266 aa13.97□□□□□ -0.17
CLN5-219ENST00000637537 CKS1BP61024 79 aa13.97□□□□□ -0.17
CLN5-219ENST00000637537 HLA-DRB4X5D2U9 266 aa13.97□□□□□ -0.17
CLN5-219ENST00000637537 A0A1W2PRX2 142 aa13.97□□□□□ -0.17
CLN5-219ENST00000637537 PRSS47A8MTI9 375 aa13.97□□□□□ -0.17
CLN5-219ENST00000637537 GNRH2O43555 120 aa13.97□□□□□ -0.17
CLN5-219ENST00000637537 SH2D6Q7Z4S9 175 aa13.97□□□□□ -0.17
CLN5-219ENST00000637537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.96□□□□□ -0.17
CLN5-219ENST00000637537 SNRPD3P62318 126 aaKnown RBP13.96□□□□□ -0.17
CLN5-219ENST00000637537 SPANXN1Q5VSR9 72 aa13.96□□□□□ -0.17
CLN5-219ENST00000637537 C4orf3Q8WVX3 66 aa13.96□□□□□ -0.17
CLN5-219ENST00000637537 DLX4Q92988 240 aaPredicted RBP13.96□□□□□ -0.17
CLN5-219ENST00000637537 GATA1P15976 413 aaPredicted RBP13.96□□□□□ -0.18
CLN5-219ENST00000637537 SCGB2A2Q13296 93 aa13.96□□□□□ -0.18
CLN5-219ENST00000637537 ETDBQ3ZM63 59 aa13.96□□□□□ -0.18
CLN5-219ENST00000637537 ZNF479Q96JC4 524 aa13.96□□□□□ -0.18
CLN5-219ENST00000637537 PRO0461Q9UI25 63 aa13.95□□□□□ -0.18
CLN5-219ENST00000637537 SETXQ7Z333 2677 aaKnown RBP13.95□□□□□ -0.18
CLN5-219ENST00000637537 TRAV12-2A0A075B6T6 113 aa13.95□□□□□ -0.18
CLN5-219ENST00000637537 H3BMG7 143 aa13.95□□□□□ -0.18
CLN5-219ENST00000637537 IGKCP01834 107 aa13.95□□□□□ -0.18
CLN5-219ENST00000637537 S100A4P26447 101 aaKnown RBP13.94□□□□□ -0.18
CLN5-219ENST00000637537 TRAV12-3A0A0B4J271 114 aa13.94□□□□□ -0.18
CLN5-219ENST00000637537 M0R381 172 aa13.94□□□□□ -0.18
CLN5-219ENST00000637537 FCER1GP30273 86 aa13.94□□□□□ -0.18
CLN5-219ENST00000637537 TAL2Q16559 108 aa13.94□□□□□ -0.18
CLN5-219ENST00000637537 TRAV26-2A0A0B4J265 109 aa13.93□□□□□ -0.18
CLN5-219ENST00000637537 A0A0J9YX75 114 aa13.93□□□□□ -0.18
CLN5-219ENST00000637537 KLLNB2CW77 178 aa13.93□□□□□ -0.18
CLN5-219ENST00000637537 APRG1Q8IVJ8 170 aa13.93□□□□□ -0.18
CLN5-219ENST00000637537 C12orf74Q32Q52 190 aa13.93□□□□□ -0.18
CLN5-219ENST00000637537 MRAP2Q96G30 205 aa13.93□□□□□ -0.18
CLN5-219ENST00000637537 CD28P10747 220 aa13.92□□□□□ -0.18
CLN5-219ENST00000637537 LEPP41159 167 aa13.92□□□□□ -0.18
CLN5-219ENST00000637537 GTSCR1Q86UQ5 136 aa13.92□□□□□ -0.18
CLN5-219ENST00000637537 MAP1LC3AQ9H492 121 aa13.92□□□□□ -0.18
CLN5-219ENST00000637537 K7EMI3 77 aa13.92□□□□□ -0.18
CLN5-219ENST00000637537 GAGE13Q4V321 117 aa13.92□□□□□ -0.18
CLN5-219ENST00000637537 MUC4Q99102 2169 aa13.91□□□□□ -0.18
CLN5-219ENST00000637537 TRAV26-1A0A087WT03 109 aa13.91□□□□□ -0.18
CLN5-219ENST00000637537 ASIPP42127 132 aa13.91□□□□□ -0.18
CLN5-219ENST00000637537 TMEM61Q8N0U2 210 aa13.91□□□□□ -0.18
CLN5-219ENST00000637537 DPM2O94777 84 aa13.91□□□□□ -0.18
CLN5-219ENST00000637537 PRSS1P07477 247 aa13.91□□□□□ -0.18
CLN5-219ENST00000637537 SPINK13Q1W4C9 94 aa13.91□□□□□ -0.18
CLN5-219ENST00000637537 ZC2HC1BQ5TFG8 222 aa13.91□□□□□ -0.18
CLN5-219ENST00000637537 INSL3P51460 131 aa13.9□□□□□ -0.18
CLN5-219ENST00000637537 TRBV7-9A0A0J9YWB2 115 aa13.9□□□□□ -0.18
CLN5-219ENST00000637537 ATP5LO75964 103 aa13.9□□□□□ -0.18
CLN5-219ENST00000637537 RNASE3P12724 160 aaKnown RBP13.9□□□□□ -0.18
CLN5-219ENST00000637537 MAPKAPK5-AS1Q8N8E1 139 aa13.9□□□□□ -0.18
CLN5-219ENST00000637537 LINC01006Q8NI28 216 aa13.9□□□□□ -0.18
CLN5-219ENST00000637537 RAX2Q96IS3 184 aa13.9□□□□□ -0.18
CLN5-219ENST00000637537 PHLDA3Q9Y5J5 127 aa13.9□□□□□ -0.18
CLN5-219ENST00000637537 RRN3P1Q2M238 152 aa13.89□□□□□ -0.19
CLN5-219ENST00000637537 AMTNQ6UX39 209 aa13.89□□□□□ -0.19
CLN5-219ENST00000637537 NXT2Q9NPJ8 142 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms