RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 SFRP2Q96HF1 295 aa11.58□□□□□ -0.56
SPTAN1-214ENST00000628614 MANBALQ9NQG1 85 aa11.58□□□□□ -0.56
SPTAN1-214ENST00000628614 PSCAO43653 123 aa11.57□□□□□ -0.56
SPTAN1-214ENST00000628614 RAB5CP51148 216 aa11.57□□□□□ -0.56
SPTAN1-214ENST00000628614 EIF5AL1Q6IS14 154 aaKnown RBP11.57□□□□□ -0.56
SPTAN1-214ENST00000628614 BAGE2Q86Y30 109 aa11.57□□□□□ -0.56
SPTAN1-214ENST00000628614 C14orf178Q8N769 122 aaPredicted RBP11.57□□□□□ -0.56
SPTAN1-214ENST00000628614 IGHV3-30P01768 117 aa11.56□□□□□ -0.56
SPTAN1-214ENST00000628614 IGHV3-33P01772 117 aa11.56□□□□□ -0.56
SPTAN1-214ENST00000628614 CXCL1P09341 107 aa11.56□□□□□ -0.56
SPTAN1-214ENST00000628614 IGHV3-30-3P0DP02 117 aa11.56□□□□□ -0.56
SPTAN1-214ENST00000628614 IGHV3-30-5P0DP03 117 aa11.56□□□□□ -0.56
SPTAN1-214ENST00000628614 MLST8Q9BVC4 326 aa11.56□□□□□ -0.56
SPTAN1-214ENST00000628614 A0A087WWC5 75 aa11.55□□□□□ -0.56
SPTAN1-214ENST00000628614 A0A087WWL8 130 aa11.55□□□□□ -0.56
SPTAN1-214ENST00000628614 TEX46H3BTG2 121 aa11.55□□□□□ -0.56
SPTAN1-214ENST00000628614 LAGE3Q14657 143 aa11.55□□□□□ -0.56
SPTAN1-214ENST00000628614 TRAV1-1A0A0B4J248 108 aa11.54□□□□□ -0.56
SPTAN1-214ENST00000628614 TCTE3Q8IZS6 198 aa11.54□□□□□ -0.56
SPTAN1-214ENST00000628614 KRTAP4-5Q9BYR2 181 aa11.54□□□□□ -0.56
SPTAN1-214ENST00000628614 Q9HAA7 133 aa11.54□□□□□ -0.56
SPTAN1-214ENST00000628614 GNG13Q9P2W3 67 aa11.54□□□□□ -0.56
SPTAN1-214ENST00000628614 Q9UF83 564 aa11.54□□□□□ -0.56
SPTAN1-214ENST00000628614 FUSP35637 526 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPTAN1-214ENST00000628614 RPL35P42766 123 aaKnown RBP11.53□□□□□ -0.56
SPTAN1-214ENST00000628614 RPL19P84098 196 aaKnown RBP11.53□□□□□ -0.56
SPTAN1-214ENST00000628614 PRR27Q6MZM9 219 aa11.53□□□□□ -0.56
SPTAN1-214ENST00000628614 Q8N1X5 172 aa11.53□□□□□ -0.56
SPTAN1-214ENST00000628614 C11orf52Q96A22 123 aa11.53□□□□□ -0.56
SPTAN1-214ENST00000628614 ABCA13Q86UQ4 5058 aa11.52□□□□□ -0.56
SPTAN1-214ENST00000628614 TRBV10-1A0A0K0K1A3 114 aa11.52□□□□□ -0.57
SPTAN1-214ENST00000628614 SULT1A2P50226 295 aa11.52□□□□□ -0.57
SPTAN1-214ENST00000628614 CCL20P78556 96 aa11.52□□□□□ -0.57
SPTAN1-214ENST00000628614 SNAI2O43623 268 aa11.51□□□□□ -0.57
SPTAN1-214ENST00000628614 OR10AG1Q8NH19 301 aa11.51□□□□□ -0.57
SPTAN1-214ENST00000628614 TM2D2Q9BX73 214 aa11.51□□□□□ -0.57
SPTAN1-214ENST00000628614 LRCOL1A6NCL2 159 aa11.5□□□□□ -0.57
SPTAN1-214ENST00000628614 OR5AL1P0C617 328 aa11.5□□□□□ -0.57
SPTAN1-214ENST00000628614 RPL36AP83881 106 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-214ENST00000628614 TOR2AQ5JU69 321 aa11.5□□□□□ -0.57
SPTAN1-214ENST00000628614 RPL36ALQ969Q0 106 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-214ENST00000628614 DERL1Q9BUN8 251 aa11.5□□□□□ -0.57
SPTAN1-214ENST00000628614 SSBP4Q9BWG4 385 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-214ENST00000628614 TRAV8-3A0A0A6YYJ7 113 aa11.49□□□□□ -0.57
SPTAN1-214ENST00000628614 IFNA1P01562 189 aa11.49□□□□□ -0.57
SPTAN1-214ENST00000628614 C1QBP02746 253 aa11.49□□□□□ -0.57
SPTAN1-214ENST00000628614 RAB4BP61018 213 aa11.49□□□□□ -0.57
SPTAN1-214ENST00000628614 SPANXN1Q5VSR9 72 aa11.49□□□□□ -0.57
SPTAN1-214ENST00000628614 SLC51BQ86UW2 128 aa11.49□□□□□ -0.57
SPTAN1-214ENST00000628614 Q8N3U1 123 aa11.49□□□□□ -0.57
SPTAN1-214ENST00000628614 NTN5Q8WTR8 489 aaPredicted RBP11.49□□□□□ -0.57
SPTAN1-214ENST00000628614 URGCP-MRPS24S4R325 110 aa11.49□□□□□ -0.57
SPTAN1-214ENST00000628614 TRBV7-3A0A075B6L6 115 aa11.48□□□□□ -0.57
SPTAN1-214ENST00000628614 PDE6DO43924 150 aa11.48□□□□□ -0.57
SPTAN1-214ENST00000628614 MEF2BQ02080 365 aaPredicted RBP11.48□□□□□ -0.57
SPTAN1-214ENST00000628614 ZNF56Q15929 161 aa11.48□□□□□ -0.57
SPTAN1-214ENST00000628614 CENPWQ5EE01 88 aa11.48□□□□□ -0.57
SPTAN1-214ENST00000628614 DAZ4Q86SG3 579 aaKnown RBP11.48□□□□□ -0.57
SPTAN1-214ENST00000628614 SMIM12Q96EX1 92 aa11.48□□□□□ -0.57
SPTAN1-214ENST00000628614 DAZ3Q9NR90 486 aaKnown RBP11.48□□□□□ -0.57
SPTAN1-214ENST00000628614 IGLV5-52A0A0A0MRZ9 124 aa11.47□□□□□ -0.57
SPTAN1-214ENST00000628614 GCSHP23434 173 aa11.47□□□□□ -0.57
SPTAN1-214ENST00000628614 KRTAP10-1P60331 282 aa11.47□□□□□ -0.57
SPTAN1-214ENST00000628614 UBE2D3P61077 147 aa11.47□□□□□ -0.57
SPTAN1-214ENST00000628614 UBE2D2P62837 147 aa11.47□□□□□ -0.57
SPTAN1-214ENST00000628614 OR10G8Q8NGN5 311 aa11.47□□□□□ -0.57
SPTAN1-214ENST00000628614 GNG4P50150 75 aa11.46□□□□□ -0.57
SPTAN1-214ENST00000628614 KCNIP4Q6PIL6 250 aa11.46□□□□□ -0.57
SPTAN1-214ENST00000628614 NIT1Q86X76 327 aa11.46□□□□□ -0.57
SPTAN1-214ENST00000628614 Q8N814 137 aa11.46□□□□□ -0.57
SPTAN1-214ENST00000628614 DAZAP1Q96EP5 407 aaKnown RBP11.46□□□□□ -0.57
SPTAN1-214ENST00000628614 CHCHD7Q9BUK0 85 aa11.46□□□□□ -0.57
SPTAN1-214ENST00000628614 MUC21A0A0G2JKD1 596 aa11.45□□□□□ -0.58
SPTAN1-214ENST00000628614 MUC21A0A140T8X8 626 aa11.45□□□□□ -0.58
SPTAN1-214ENST00000628614 SMIM17P0DL12 118 aa11.45□□□□□ -0.58
SPTAN1-214ENST00000628614 Q6ZNX1 250 aa11.45□□□□□ -0.58
SPTAN1-214ENST00000628614 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.45□□□□□ -0.58
SPTAN1-214ENST00000628614 AP1S3Q96PC3 154 aa11.45□□□□□ -0.58
SPTAN1-214ENST00000628614 COX11Q9Y6N1 276 aa11.45□□□□□ -0.58
SPTAN1-214ENST00000628614 A0A087WX48 190 aa11.44□□□□□ -0.58
SPTAN1-214ENST00000628614 IGLV2-8P01709 118 aa11.44□□□□□ -0.58
SPTAN1-214ENST00000628614 BCL2P10415 239 aa11.44□□□□□ -0.58
SPTAN1-214ENST00000628614 TAGLN2P37802 199 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-214ENST00000628614 RPS20P60866 119 aaKnown RBP11.44□□□□□ -0.58
SPTAN1-214ENST00000628614 NEXN-AS1Q8NBZ9 246 aa11.44□□□□□ -0.58
SPTAN1-214ENST00000628614 RMI2Q96E14 147 aa11.44□□□□□ -0.58
SPTAN1-214ENST00000628614 BIN3Q9NQY0 253 aa11.44□□□□□ -0.58
SPTAN1-214ENST00000628614 XKRY2A2RUG3 117 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 RAB19A4D1S5 217 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 F5H697 171 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 XGP55808 180 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 SSTP61278 116 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 ELOBQ15370 118 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 AKAP14Q86UN6 197 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 OR2D3Q8NGH3 330 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 MED9Q9NWA0 146 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 VAX2Q9UIW0 290 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 FAT1Q14517 4588 aa11.43□□□□□ -0.58
SPTAN1-214ENST00000628614 TRBV6-8A0A0A6YYG3 113 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms