RNA–Protein interactions for RNA: ENST00000626299.2

SOX2-OT-238, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 622 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-238ENST00000626299 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
SOX2-OT-238ENST00000626299 SMIM7Q9BQ49 75 aa9.33□□□□□ -0.92
SOX2-OT-238ENST00000626299 PRADC1Q9BSG0 188 aa9.33□□□□□ -0.92
SOX2-OT-238ENST00000626299 Q9H8V8 135 aa9.33□□□□□ -0.92
SOX2-OT-238ENST00000626299 SSTP61278 116 aa9.32□□□□□ -0.92
SOX2-OT-238ENST00000626299 SPANXN1Q5VSR9 72 aa9.32□□□□□ -0.92
SOX2-OT-238ENST00000626299 C14orf178Q8N769 122 aaPredicted RBP9.32□□□□□ -0.92
SOX2-OT-238ENST00000626299 TPPP3Q9BW30 176 aa9.32□□□□□ -0.92
SOX2-OT-238ENST00000626299 RPP21Q9H633 154 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-238ENST00000626299 Q9UF83 564 aa9.32□□□□□ -0.92
SOX2-OT-238ENST00000626299 LY96Q9Y6Y9 160 aa9.32□□□□□ -0.92
SOX2-OT-238ENST00000626299 NBDYA0A0U1RRE5 68 aa9.31□□□□□ -0.92
SOX2-OT-238ENST00000626299 XKRY2A2RUG3 117 aa9.31□□□□□ -0.92
SOX2-OT-238ENST00000626299 ZNF727A8MUV8 499 aa9.31□□□□□ -0.92
SOX2-OT-238ENST00000626299 LINC01551Q86U37 167 aa9.31□□□□□ -0.92
SOX2-OT-238ENST00000626299 KRTAP1-5Q9BYS1 174 aa9.31□□□□□ -0.92
SOX2-OT-238ENST00000626299 NACAE9PAV3 2078 aa9.3□□□□□ -0.92
SOX2-OT-238ENST00000626299 LINC00694P0DN24 101 aa9.3□□□□□ -0.92
SOX2-OT-238ENST00000626299 LYZL1Q6UWQ5 148 aa9.3□□□□□ -0.92
SOX2-OT-238ENST00000626299 FAM231DQ6ZW35 169 aa9.3□□□□□ -0.92
SOX2-OT-238ENST00000626299 SH2D6Q7Z4S9 175 aa9.3□□□□□ -0.92
SOX2-OT-238ENST00000626299 GAGE12JA6NER3 117 aa9.29□□□□□ -0.92
SOX2-OT-238ENST00000626299 RTL8CO15255 209 aa9.29□□□□□ -0.92
SOX2-OT-238ENST00000626299 CTRLP40313 264 aa9.29□□□□□ -0.92
SOX2-OT-238ENST00000626299 GAGE1Q13065 139 aa9.29□□□□□ -0.92
SOX2-OT-238ENST00000626299 GAGE4Q13068 117 aa9.29□□□□□ -0.92
SOX2-OT-238ENST00000626299 GAGE5Q13069 117 aa9.29□□□□□ -0.92
SOX2-OT-238ENST00000626299 PEA15Q15121 130 aa9.29□□□□□ -0.92
SOX2-OT-238ENST00000626299 GAGE13Q4V321 117 aa9.29□□□□□ -0.92
SOX2-OT-238ENST00000626299 MSRB1Q9NZV6 116 aa9.29□□□□□ -0.92
SOX2-OT-238ENST00000626299 KIF25-AS1Q9Y6Z4 181 aa9.29□□□□□ -0.92
SOX2-OT-238ENST00000626299 A0A1W2PPQ1 181 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 F2Z2F3 143 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 SIVA1O15304 175 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 GATCO43716 136 aaKnown RBP9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 TIRAPP58753 221 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 ERVFC1-1P60608 527 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 CACNG7P62955 275 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 IFITM2Q01629 132 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 WFDC10BQ8IUB3 73 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 GTSF1Q8WW33 167 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 AP1S3Q96PC3 154 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 SMDT1Q9H4I9 107 aa9.28□□□□□ -0.92
SOX2-OT-238ENST00000626299 DNAH2Q9P225 4427 aa9.27□□□□□ -0.93
SOX2-OT-238ENST00000626299 LINC00315P59091 139 aa9.27□□□□□ -0.93
SOX2-OT-238ENST00000626299 RAB4BP61018 213 aa9.27□□□□□ -0.93
SOX2-OT-238ENST00000626299 ZNF56Q15929 161 aa9.27□□□□□ -0.93
SOX2-OT-238ENST00000626299 FAM74A3Q4VXF1 159 aa9.27□□□□□ -0.93
SOX2-OT-238ENST00000626299 ATP6V0E2Q8NHE4 81 aa9.27□□□□□ -0.93
SOX2-OT-238ENST00000626299 DNAH10Q8IVF4 4471 aa9.27□□□□□ -0.93
SOX2-OT-238ENST00000626299 EPPK1P58107 5090 aaKnown RBP9.27□□□□□ -0.93
SOX2-OT-238ENST00000626299 RAB14P61106 215 aa9.26□□□□□ -0.93
SOX2-OT-238ENST00000626299 RPL23P62829 140 aaKnown RBP9.26□□□□□ -0.93
SOX2-OT-238ENST00000626299 TMEM241Q24JQ0 296 aa9.26□□□□□ -0.93
SOX2-OT-238ENST00000626299 C1orf134Q5TEV5 83 aa9.26□□□□□ -0.93
SOX2-OT-238ENST00000626299 CNFNQ9BYD5 112 aa9.26□□□□□ -0.93
SOX2-OT-238ENST00000626299 GTSF1LQ9H1H1 148 aa9.26□□□□□ -0.93
SOX2-OT-238ENST00000626299 TRBV10-1A0A0K0K1A3 114 aa9.25□□□□□ -0.93
SOX2-OT-238ENST00000626299 NTF3P20783 257 aa9.25□□□□□ -0.93
SOX2-OT-238ENST00000626299 CT83Q5H943 113 aa9.25□□□□□ -0.93
SOX2-OT-238ENST00000626299 TTC32Q5I0X7 151 aa9.25□□□□□ -0.93
SOX2-OT-238ENST00000626299 CLLU1Q5K131 121 aa9.25□□□□□ -0.93
SOX2-OT-238ENST00000626299 ISOC2Q96AB3 205 aa9.25□□□□□ -0.93
SOX2-OT-238ENST00000626299 OSTCQ9NRP0 149 aa9.25□□□□□ -0.93
SOX2-OT-238ENST00000626299 NAT8Q9UHE5 227 aa9.25□□□□□ -0.93
SOX2-OT-238ENST00000626299 A8MWL6 223 aa9.24□□□□□ -0.93
SOX2-OT-238ENST00000626299 SMIM17P0DL12 118 aa9.24□□□□□ -0.93
SOX2-OT-238ENST00000626299 EVI2AP22794 236 aa9.24□□□□□ -0.93
SOX2-OT-238ENST00000626299 ADIRFQ15847 76 aa9.24□□□□□ -0.93
SOX2-OT-238ENST00000626299 SOHLH1Q5JUK2 328 aa9.24□□□□□ -0.93
SOX2-OT-238ENST00000626299 WDR73Q6P4I2 378 aa9.24□□□□□ -0.93
SOX2-OT-238ENST00000626299 LINC00336Q6ZUF6 198 aa9.24□□□□□ -0.93
SOX2-OT-238ENST00000626299 C6orf223Q8N319 242 aa9.24□□□□□ -0.93
SOX2-OT-238ENST00000626299 PGPEP1Q9NXJ5 209 aa9.24□□□□□ -0.93
SOX2-OT-238ENST00000626299 FRAS1Q86XX4 4008 aa9.24□□□□□ -0.93
SOX2-OT-238ENST00000626299 F5H697 171 aa9.23□□□□□ -0.93
SOX2-OT-238ENST00000626299 MGPP08493 103 aa9.23□□□□□ -0.93
SOX2-OT-238ENST00000626299 TRGC1P0CF51 173 aa9.23□□□□□ -0.93
SOX2-OT-238ENST00000626299 DNAH10OSP0CZ25 163 aa9.23□□□□□ -0.93
SOX2-OT-238ENST00000626299 LELP1Q5T871 98 aa9.23□□□□□ -0.93
SOX2-OT-238ENST00000626299 NEXN-AS1Q8NBZ9 246 aa9.23□□□□□ -0.93
SOX2-OT-238ENST00000626299 OR10G8Q8NGN5 311 aa9.23□□□□□ -0.93
SOX2-OT-238ENST00000626299 TSKUQ8WUA8 353 aa9.23□□□□□ -0.93
SOX2-OT-238ENST00000626299 V9GYV3 84 aa9.23□□□□□ -0.93
SOX2-OT-238ENST00000626299 TRBV7-3A0A075B6L6 115 aa9.22□□□□□ -0.93
SOX2-OT-238ENST00000626299 PRSS29PA6NIE9 313 aa9.22□□□□□ -0.93
SOX2-OT-238ENST00000626299 FOXA3P55318 350 aaPredicted RBP9.22□□□□□ -0.93
SOX2-OT-238ENST00000626299 UBE2D3P61077 147 aa9.22□□□□□ -0.93
SOX2-OT-238ENST00000626299 UBE2D2P62837 147 aa9.22□□□□□ -0.93
SOX2-OT-238ENST00000626299 RPL36AP83881 106 aaKnown RBP9.22□□□□□ -0.93
SOX2-OT-238ENST00000626299 TWIST1Q15672 202 aa9.22□□□□□ -0.93
SOX2-OT-238ENST00000626299 OR10J3Q5JRS4 329 aa9.22□□□□□ -0.93
SOX2-OT-238ENST00000626299 RPL36ALQ969Q0 106 aaKnown RBP9.22□□□□□ -0.93
SOX2-OT-238ENST00000626299 PGLYRP4Q96LB8 373 aa9.22□□□□□ -0.93
SOX2-OT-238ENST00000626299 TRAV8-6A0A0B4J262 113 aa9.21□□□□□ -0.94
SOX2-OT-238ENST00000626299 IGHV3-38A0A0C4DH36 116 aa9.21□□□□□ -0.94
SOX2-OT-238ENST00000626299 M0QY20 66 aa9.21□□□□□ -0.94
SOX2-OT-238ENST00000626299 SUMO4Q6EEV6 95 aa9.21□□□□□ -0.94
SOX2-OT-238ENST00000626299 C15orf54Q8N8G6 183 aa9.21□□□□□ -0.94
SOX2-OT-238ENST00000626299 GFRA4Q9GZZ7 299 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms