RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 TRAV12-3A0A0B4J271 114 aa0.24□□□□□ -2.37
CDR1-202ENST00000625883 RBAKDNA6NC62 111 aa0.24□□□□□ -2.37
CDR1-202ENST00000625883 M0R2Z0 102 aa0.24□□□□□ -2.37
CDR1-202ENST00000625883 VSTM2AQ8TAG5 236 aa0.24□□□□□ -2.37
CDR1-202ENST00000625883 MAFIPQ8WZ33 124 aa0.24□□□□□ -2.37
CDR1-202ENST00000625883 JMJD1CQ15652 2540 aa0.24□□□□□ -2.37
CDR1-202ENST00000625883 PIEZO1Q92508 2521 aa0.24□□□□□ -2.37
CDR1-202ENST00000625883 GVQW2A0A096LPI5 108 aaPredicted RBP0.23□□□□□ -2.37
CDR1-202ENST00000625883 F2Z2F3 143 aa0.23□□□□□ -2.37
CDR1-202ENST00000625883 C20orf197Q8N268 126 aa0.23□□□□□ -2.37
CDR1-202ENST00000625883 PRR15LQ9BU68 103 aa0.23□□□□□ -2.37
CDR1-202ENST00000625883 ANK2Q01484 3957 aa0.23□□□□□ -2.37
CDR1-202ENST00000625883 J3QR89 54 aa0.22□□□□□ -2.37
CDR1-202ENST00000625883 NCR2O95944 276 aa0.22□□□□□ -2.37
CDR1-202ENST00000625883 SSBP1Q04837 148 aaKnown RBP0.22□□□□□ -2.37
CDR1-202ENST00000625883 SPCS2Q15005 226 aa0.22□□□□□ -2.37
CDR1-202ENST00000625883 C4orf33Q8N1A6 199 aa0.22□□□□□ -2.37
CDR1-202ENST00000625883 CEP152O94986 1710 aa0.22□□□□□ -2.37
CDR1-202ENST00000625883 TNS1Q9HBL0 1735 aaKnown RBP0.22□□□□□ -2.37
CDR1-202ENST00000625883 MED13LQ71F56 2210 aa0.22□□□□□ -2.37
CDR1-202ENST00000625883 PIRTP0C851 137 aa0.22□□□□□ -2.37
CDR1-202ENST00000625883 COX7B2Q8TF08 81 aa0.22□□□□□ -2.37
CDR1-202ENST00000625883 ANP32BQ92688 251 aaKnown RBP0.22□□□□□ -2.37
CDR1-202ENST00000625883 Q96NJ1 140 aa0.22□□□□□ -2.37
CDR1-202ENST00000625883 BPESC1Q9GZL8 116 aa0.22□□□□□ -2.37
CDR1-202ENST00000625883 MYH13Q9UKX3 1938 aa0.21□□□□□ -2.38
CDR1-202ENST00000625883 VIRMAQ69YN4 1812 aaKnown RBP0.21□□□□□ -2.38
CDR1-202ENST00000625883 ADGRB1O14514 1584 aa0.21□□□□□ -2.38
CDR1-202ENST00000625883 CDK13Q14004 1512 aaKnown RBP0.21□□□□□ -2.38
CDR1-202ENST00000625883 SOGA1O94964 1423 aa0.21□□□□□ -2.38
CDR1-202ENST00000625883 SMIM21Q3B7S5 101 aa0.21□□□□□ -2.38
CDR1-202ENST00000625883 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.21□□□□□ -2.38
CDR1-202ENST00000625883 Q6ZUT4 128 aa0.21□□□□□ -2.38
CDR1-202ENST00000625883 COPZ2Q9P299 210 aa0.21□□□□□ -2.38
CDR1-202ENST00000625883 K7ERU9 68 aa0.2□□□□□ -2.38
CDR1-202ENST00000625883 NPFFO15130 113 aa0.2□□□□□ -2.38
CDR1-202ENST00000625883 COX4I1P13073 169 aa0.2□□□□□ -2.38
CDR1-202ENST00000625883 SPANXN1Q5VSR9 72 aa0.2□□□□□ -2.38
CDR1-202ENST00000625883 SLC48A1Q6P1K1 146 aa0.2□□□□□ -2.38
CDR1-202ENST00000625883 TSTD1Q8NFU3 115 aa0.2□□□□□ -2.38
CDR1-202ENST00000625883 PLXNA1Q9UIW2 1896 aa0.19□□□□□ -2.38
CDR1-202ENST00000625883 FHAD1B1AJZ9 1412 aa0.19□□□□□ -2.38
CDR1-202ENST00000625883 MUC22E2RYF6 1773 aaPredicted RBP0.19□□□□□ -2.38
CDR1-202ENST00000625883 TPRP12270 2363 aaKnown RBP0.19□□□□□ -2.38
CDR1-202ENST00000625883 C9orf116Q5BN46 136 aaPredicted RBP0.19□□□□□ -2.38
CDR1-202ENST00000625883 SMIM11BQ8TCY0 68 aa0.19□□□□□ -2.38
CDR1-202ENST00000625883 ZFYVE26Q68DK2 2539 aa0.19□□□□□ -2.38
CDR1-202ENST00000625883 TTC28Q96AY4 2481 aa0.19□□□□□ -2.38
CDR1-202ENST00000625883 CACNA1HO95180 2353 aa0.19□□□□□ -2.38
CDR1-202ENST00000625883 SSC5DA1L4H1 1573 aa0.18□□□□□ -2.38
CDR1-202ENST00000625883 TRBV7-1A0A0A6YYK4 115 aa0.18□□□□□ -2.38
CDR1-202ENST00000625883 FAM74A4Q5TZK3 123 aa0.18□□□□□ -2.38
CDR1-202ENST00000625883 C10orf82Q8WW14 230 aa0.18□□□□□ -2.38
CDR1-202ENST00000625883 V9GYV3 84 aa0.18□□□□□ -2.38
CDR1-202ENST00000625883 LRP1Q07954 4544 aaKnown RBP0.18□□□□□ -2.38
CDR1-202ENST00000625883 F5P12259 2224 aa0.18□□□□□ -2.38
CDR1-202ENST00000625883 UBE2G1P62253 170 aa0.16□□□□□ -2.38
CDR1-202ENST00000625883 RPS25P62851 125 aaKnown RBP0.16□□□□□ -2.38
CDR1-202ENST00000625883 PSMG3Q9BT73 122 aaPredicted RBP0.16□□□□□ -2.38
CDR1-202ENST00000625883 PHIPQ8WWQ0 1821 aa0.16□□□□□ -2.38
CDR1-202ENST00000625883 TMEM2Q9UHN6 1383 aa0.16□□□□□ -2.38
CDR1-202ENST00000625883 NRXN2Q9P2S2 1712 aa0.16□□□□□ -2.38
CDR1-202ENST00000625883 POLQO75417 2590 aa0.16□□□□□ -2.38
CDR1-202ENST00000625883 MACF1Q9UPN3 7388 aaKnown RBP0.16□□□□□ -2.38
CDR1-202ENST00000625883 RPRMQ9NS64 109 aa0.16□□□□□ -2.38
CDR1-202ENST00000625883 TMEM242Q9NWH2 141 aa0.16□□□□□ -2.38
CDR1-202ENST00000625883 LAMB1P07942 1786 aa0.16□□□□□ -2.38
CDR1-202ENST00000625883 OTOGQ6ZRI0 2925 aa0.15□□□□□ -2.39
CDR1-202ENST00000625883 MYH6P13533 1939 aa0.15□□□□□ -2.39
CDR1-202ENST00000625883 CLPSL1A2RUU4 121 aa0.15□□□□□ -2.39
CDR1-202ENST00000625883 RRAS2P62070 204 aaPredicted RBP0.15□□□□□ -2.39
CDR1-202ENST00000625883 SDF2Q99470 211 aa0.15□□□□□ -2.39
CDR1-202ENST00000625883 TPT1P8Q9HAU6 139 aa0.15□□□□□ -2.39
CDR1-202ENST00000625883 LAMC3Q9Y6N6 1575 aa0.15□□□□□ -2.39
CDR1-202ENST00000625883 ABCA12Q86UK0 2595 aa0.15□□□□□ -2.39
CDR1-202ENST00000625883 TRGV1A0A0A0MS02 117 aa0.14□□□□□ -2.39
CDR1-202ENST00000625883 IL5P05113 134 aa0.14□□□□□ -2.39
CDR1-202ENST00000625883 NMBP08949 121 aa0.14□□□□□ -2.39
CDR1-202ENST00000625883 ACYP2P14621 99 aa0.14□□□□□ -2.39
CDR1-202ENST00000625883 UBE2D1P51668 147 aa0.14□□□□□ -2.39
CDR1-202ENST00000625883 COPZ1P61923 177 aa0.14□□□□□ -2.39
CDR1-202ENST00000625883 SMCO1Q147U7 214 aa0.14□□□□□ -2.39
CDR1-202ENST00000625883 SCIMPQ6UWF3 145 aa0.14□□□□□ -2.39
CDR1-202ENST00000625883 IBTKQ9P2D0 1353 aaPredicted RBP0.14□□□□□ -2.39
CDR1-202ENST00000625883 KIAA0100Q14667 2235 aaKnown RBP0.13□□□□□ -2.39
CDR1-202ENST00000625883 AKAP11Q9UKA4 1901 aa0.13□□□□□ -2.39
CDR1-202ENST00000625883 APODP05090 189 aa0.13□□□□□ -2.39
CDR1-202ENST00000625883 RPL7L1Q6DKI1 246 aaKnown RBP0.13□□□□□ -2.39
CDR1-202ENST00000625883 Q6ZRX8 168 aa0.13□□□□□ -2.39
CDR1-202ENST00000625883 IGF2RP11717 2491 aa0.12□□□□□ -2.39
CDR1-202ENST00000625883 A6NIN4 97 aa0.12□□□□□ -2.39
CDR1-202ENST00000625883 EDDM3BP56851 147 aa0.12□□□□□ -2.39
CDR1-202ENST00000625883 TMEM14DPA8MWL7 114 aa0.11□□□□□ -2.39
CDR1-202ENST00000625883 PIPP12273 146 aaPredicted RBP0.11□□□□□ -2.39
CDR1-202ENST00000625883 GUCA1AP43080 201 aaPredicted RBP0.11□□□□□ -2.39
CDR1-202ENST00000625883 COX6A2Q02221 97 aa0.11□□□□□ -2.39
CDR1-202ENST00000625883 Q5BKY6 102 aa0.11□□□□□ -2.39
CDR1-202ENST00000625883 UNC13BO14795 1591 aa0.11□□□□□ -2.39
CDR1-202ENST00000625883 PTPRZ1P23471 2315 aaPredicted RBP0.11□□□□□ -2.39
CDR1-202ENST00000625883 INSL4Q14641 139 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms