RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 K7EQD1 137 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 MED14OSP0DP75 135 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 STPG4Q8N801 248 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 GYPEP15421 78 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 DEFB114Q30KQ6 69 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 ZFAND6Q6FIF0 208 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 Q8N1Y9 231 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 LINC01006Q8NI28 216 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 VWC2LB2RUY7 222 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 ASPHD1Q5U4P2 390 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 LEPROTO15243 131 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 ATP6V0E2Q8NHE4 81 aa7.2□□□□□ -1.26
CLTCL1-208ENST00000615606 ESDP10768 282 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 DEFB125Q8N687 156 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 IL17DQ8TAD2 202 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 GTSF1LQ9H1H1 148 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 COX11Q9Y6N1 276 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 PRRC2AP48634 2157 aaKnown RBP7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 ZNF295-AS1Q8N0V1 137 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 A0A1W2PPR1 153 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 HERVK_113P63121 156 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 SNHG12Q9BXW3 62 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 K7EQG2 157 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 PSMB8P28062 276 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 GATD1Q8NB37 220 aa7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 KLK5Q9Y337 293 aaPredicted RBP7.19□□□□□ -1.26
CLTCL1-208ENST00000615606 TMEM263Q8WUH6 116 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-208ENST00000615606 SPTBN4Q9H254 2564 aa7.18□□□□□ -1.26
CLTCL1-208ENST00000615606 DAZ2Q13117 558 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-208ENST00000615606 DAZ4Q86SG3 579 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-208ENST00000615606 ODF3Q96PU9 254 aa7.18□□□□□ -1.26
CLTCL1-208ENST00000615606 DAZ3Q9NR90 486 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-208ENST00000615606 SUMO4Q6EEV6 95 aa7.18□□□□□ -1.26
CLTCL1-208ENST00000615606 PLA2G2EQ9NZK7 142 aa7.18□□□□□ -1.26
CLTCL1-208ENST00000615606 KIAA1549Q9HCM3 1950 aa7.18□□□□□ -1.26
CLTCL1-208ENST00000615606 IGKV2D-24A0A075B6R9 120 aa7.17□□□□□ -1.26
CLTCL1-208ENST00000615606 SPRY2O43597 315 aa7.17□□□□□ -1.26
CLTCL1-208ENST00000615606 DEFB1P60022 68 aa7.17□□□□□ -1.26
CLTCL1-208ENST00000615606 ZNF503Q96F45 646 aa7.17□□□□□ -1.26
CLTCL1-208ENST00000615606 NDUFA7O95182 113 aa7.17□□□□□ -1.26
CLTCL1-208ENST00000615606 AVPP01185 164 aa7.17□□□□□ -1.26
CLTCL1-208ENST00000615606 C2orf82Q6UX34 121 aa7.17□□□□□ -1.26
CLTCL1-208ENST00000615606 SPANXA1Q9NS26 97 aa7.17□□□□□ -1.26
CLTCL1-208ENST00000615606 C1orf43Q9BWL3 253 aa7.17□□□□□ -1.26
CLTCL1-208ENST00000615606 C10orf99Q6UWK7 81 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 ZFAND3Q9H8U3 227 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 HHLA3Q9XRX5 114 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 F8VRH5 84 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 LGALS9BQ3B8N2 356 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 LGALS9CQ6DKI2 356 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 Q6ZWC4 215 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 WDR87Q6ZQQ6 2873 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 H3BMM0 161 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 IGLL1P15814 213 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 Q6ZQT7 251 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 UBE2WQ96B02 151 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 SMIM9A6NGZ8 99 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 F8W735 103 aaPredicted RBP7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 PKIGQ9Y2B9 76 aa7.16□□□□□ -1.26
CLTCL1-208ENST00000615606 OCIAD2Q56VL3 154 aa7.15□□□□□ -1.26
CLTCL1-208ENST00000615606 IGLC3P0DOY3 106 aa7.15□□□□□ -1.26
CLTCL1-208ENST00000615606 CLPSL2Q6UWE3 100 aa7.15□□□□□ -1.26
CLTCL1-208ENST00000615606 ZNF625Q96I27 306 aaPredicted RBP7.15□□□□□ -1.26
CLTCL1-208ENST00000615606 MYO18BQ8IUG5 2567 aa7.15□□□□□ -1.26
CLTCL1-208ENST00000615606 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.15□□□□□ -1.27
CLTCL1-208ENST00000615606 IGKV2-29A2NJV5 120 aaPredicted RBP7.15□□□□□ -1.27
CLTCL1-208ENST00000615606 IGLV1-40P01703 118 aa7.15□□□□□ -1.27
CLTCL1-208ENST00000615606 NKAPP1Q8N9T2 125 aa7.15□□□□□ -1.27
CLTCL1-208ENST00000615606 ATG2AQ2TAZ0 1938 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 TRAV8-3A0A0A6YYJ7 113 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 DEFB4AO15263 64 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 CTRLP40313 264 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 TRBV7-3A0A075B6L6 115 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 PFN2P35080 140 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 OVOL2Q9BRP0 275 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 Q9HAA7 133 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 MSRB1Q9NZV6 116 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 WNK1Q9H4A3 2382 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 PRSS29PA6NIE9 313 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 RPL39LQ96EH5 51 aaKnown RBP7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 SMR3AQ99954 134 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 MRPL35Q9NZE8 188 aaKnown RBP7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 LAMTOR3Q9UHA4 124 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 NDUFA12Q9UI09 145 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 PRO0255Q9UI72 69 aa7.14□□□□□ -1.27
CLTCL1-208ENST00000615606 SPINK8P0C7L1 97 aa7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 XCL1P47992 114 aa7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 SPATA25Q9BR10 227 aa7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 TRAV4A0A0B4J268 109 aa7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 NPSP0C0P6 89 aa7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 GATA1P15976 413 aaPredicted RBP7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 ESM1Q9NQ30 184 aa7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 C9JAW5 83 aa7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 MAJINQ3KP22 176 aa7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 C11orf45Q8TAV5 145 aa7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 CHD8Q9HCK8 2581 aa7.13□□□□□ -1.27
CLTCL1-208ENST00000615606 RNASE13Q5GAN3 156 aaKnown RBP7.12□□□□□ -1.27
CLTCL1-208ENST00000615606 TNCP24821 2201 aa7.12□□□□□ -1.27
CLTCL1-208ENST00000615606 ABCA2Q9BZC7 2435 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms