RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 IGHV1-58A0A0C4DH39 117 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 PATE3B3GLJ2 98 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 LGALS3P17931 250 aaKnown RBP3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 CCL26Q9Y258 94 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 TET1Q8NFU7 2136 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 NCOR1O75376 2440 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 DSCAML1Q8TD84 2053 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 DSCAMO60469 2012 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 IGHV3-38A0A0C4DH36 116 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 CFC1BP0CG36 223 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 CFC1P0CG37 223 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 IGLV3-21P80748 117 aaPredicted RBP3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 DEFB103AP81534 67 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 LCA10Q71F78 164 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 GGNQ86UU5 652 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 PROK2Q9HC23 129 aa3.67□□□□□ -1.82
SPTBN1-206ENST00000602898 BDP1A6H8Y1 2624 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 SPAG17Q6Q759 2223 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 MYO7BQ6PIF6 2116 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 SVILO95425 2214 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 PRRC2BQ5JSZ5 2229 aaKnown RBP3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 CACNA1IQ9P0X4 2223 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 BUB1B-PAK6H3BSN5 160 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 K7EQG2 157 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 LY6G5CQ5SRR4 150 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 LAMA2P24043 3122 aaKnown RBP3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 A0A1B0GUT8 65 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 IGLV2-14P01704 120 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 IGKV1-16P04430 117 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 SLC50A1Q9BRV3 221 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 ZNF580Q9UK33 172 aa3.66□□□□□ -1.82
SPTBN1-206ENST00000602898 CDH23Q9H251 3354 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 IGHV1OR15-1A0A075B7D0 117 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 TRBV30A0A0K0K1B3 111 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 H7C423 109 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 TIMM17BO60830 172 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 NXPH4O95158 308 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 IGHV3-33P01772 117 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 PRSS1P07477 247 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 P0C879 139 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 Q6ZRP5 223 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 ORMDL3Q8N138 153 aa3.65□□□□□ -1.82
SPTBN1-206ENST00000602898 NACAE9PAV3 2078 aa3.65□□□□□ -1.83
SPTBN1-206ENST00000602898 TRAV40A0A0B4J280 105 aa3.65□□□□□ -1.83
SPTBN1-206ENST00000602898 A0A1W2PQD3 144 aa3.65□□□□□ -1.83
SPTBN1-206ENST00000602898 RPL37AP8A6NKH3 93 aa3.65□□□□□ -1.83
SPTBN1-206ENST00000602898 ZNF714Q96N38 554 aa3.65□□□□□ -1.83
SPTBN1-206ENST00000602898 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.83
SPTBN1-206ENST00000602898 IQCF6A8MYZ5 107 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 M0R135 149 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 RNASE2P10153 161 aaKnown RBP3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 FGF12P61328 243 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 ITLN1Q8WWA0 313 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 ITLN2Q8WWU7 325 aaPredicted RBP3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 TOMM6Q96B49 74 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 TET2Q6N021 2002 aaPredicted RBP3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 CCKP06307 115 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 PRB4P10163 310 aaPredicted RBP3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 MIR17HGQ75NE6 70 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 ZNF329Q86UD4 541 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 DAND5Q8N907 189 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 MUC3AQ02505 3323 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 IGLV5-52A0A0A0MRZ9 124 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 KRTAP9-6A0A140TA67 174 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 D6R8Y8 96 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 H7BZZ5 65 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 IGHV3-30P01768 117 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 IGHV3-30-5P0DP03 117 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 DEFB110Q30KQ9 67 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 SPINK9Q5DT21 86 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 S100A7L2Q5SY68 101 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 FAM223AQ8IWN6 122 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 NUP37Q8NFH4 326 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 ZNF702PQ9H963 129 aa3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 MRPL35Q9NZE8 188 aaKnown RBP3.64□□□□□ -1.83
SPTBN1-206ENST00000602898 TRAV12-1A0A0B4J245 112 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 ZNF815PA8K554 130 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 IGHV4-38-2P0DP08 117 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 FBXL19-AS1Q494R0 122 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 Q6JHZ5 121 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 NKAPP1Q8N9T2 125 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 TMEM263Q8WUH6 116 aaKnown RBP3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 F8VRH5 84 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 LINC01565O15544 149 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 IGHV4-39P01824 125 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 COX6B1P14854 86 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 LYPD5Q6UWN5 251 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 ADM2Q7Z4H4 148 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 KRTAP3-1Q9BYR8 98 aa3.63□□□□□ -1.83
SPTBN1-206ENST00000602898 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 XCL1P47992 114 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 RHOHQ15669 191 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 LINC01554Q52M75 96 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 SOSTDC1Q6X4U4 206 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 SPTSSAQ969W0 71 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 LINC00474Q9P2X8 69 aa3.62□□□□□ -1.83
SPTBN1-206ENST00000602898 CEP192Q8TEP8 1941 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms