RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
IRF3-230ENST00000601809 PHLDA3Q9Y5J5 127 aa11.86□□□□□ -0.51
IRF3-230ENST00000601809 RHODO00212 210 aa11.85□□□□□ -0.51
IRF3-230ENST00000601809 IFNA1P01562 189 aa11.85□□□□□ -0.51
IRF3-230ENST00000601809 OR5AL1P0C617 328 aa11.85□□□□□ -0.51
IRF3-230ENST00000601809 PRR27Q6MZM9 219 aa11.85□□□□□ -0.51
IRF3-230ENST00000601809 ZFP82Q8N141 532 aa11.85□□□□□ -0.51
IRF3-230ENST00000601809 OR10AG1Q8NH19 301 aa11.85□□□□□ -0.51
IRF3-230ENST00000601809 M0R381 172 aa11.84□□□□□ -0.51
IRF3-230ENST00000601809 TNFRSF18Q9Y5U5 241 aa11.84□□□□□ -0.51
IRF3-230ENST00000601809 LY96Q9Y6Y9 160 aa11.84□□□□□ -0.51
IRF3-230ENST00000601809 APOBP04114 4563 aaKnown RBP11.84□□□□□ -0.51
IRF3-230ENST00000601809 A0A087WWL8 130 aa11.83□□□□□ -0.52
IRF3-230ENST00000601809 K7EP13 123 aa11.83□□□□□ -0.52
IRF3-230ENST00000601809 TAGLN2P37802 199 aaKnown RBP11.83□□□□□ -0.52
IRF3-230ENST00000601809 ATP6V0E2Q8NHE4 81 aa11.83□□□□□ -0.52
IRF3-230ENST00000601809 GTSF1LQ9H1H1 148 aa11.83□□□□□ -0.52
IRF3-230ENST00000601809 HSPG2P98160 4391 aa11.83□□□□□ -0.52
IRF3-230ENST00000601809 IGLC6P0CF74 106 aa11.82□□□□□ -0.52
IRF3-230ENST00000601809 BLOC1S1P78537 153 aa11.82□□□□□ -0.52
IRF3-230ENST00000601809 LELP1Q5T871 98 aa11.82□□□□□ -0.52
IRF3-230ENST00000601809 MED9Q9NWA0 146 aa11.82□□□□□ -0.52
IRF3-230ENST00000601809 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
IRF3-230ENST00000601809 GNG4P50150 75 aa11.81□□□□□ -0.52
IRF3-230ENST00000601809 GAGE1Q13065 139 aa11.81□□□□□ -0.52
IRF3-230ENST00000601809 GAGE4Q13068 117 aa11.81□□□□□ -0.52
IRF3-230ENST00000601809 GAGE5Q13069 117 aa11.81□□□□□ -0.52
IRF3-230ENST00000601809 GAGE13Q4V321 117 aa11.81□□□□□ -0.52
IRF3-230ENST00000601809 LINC01556Q5JQF7 62 aa11.81□□□□□ -0.52
IRF3-230ENST00000601809 KIF25-AS1Q9Y6Z4 181 aa11.81□□□□□ -0.52
IRF3-230ENST00000601809 IGHV3-38A0A0C4DH36 116 aa11.8□□□□□ -0.52
IRF3-230ENST00000601809 FAM74A4Q5TZK3 123 aa11.8□□□□□ -0.52
IRF3-230ENST00000601809 GZMBP10144 247 aa11.79□□□□□ -0.52
IRF3-230ENST00000601809 MUC21A0A0G2JKD1 596 aa11.78□□□□□ -0.52
IRF3-230ENST00000601809 MUC21A0A140T8X8 626 aa11.78□□□□□ -0.52
IRF3-230ENST00000601809 RBFOX3A6NFN3 312 aa11.78□□□□□ -0.52
IRF3-230ENST00000601809 TMEM250H0YL14 139 aa11.78□□□□□ -0.52
IRF3-230ENST00000601809 K7EN84 100 aa11.78□□□□□ -0.52
IRF3-230ENST00000601809 EVI2AP22794 236 aa11.78□□□□□ -0.52
IRF3-230ENST00000601809 MSRB1Q9NZV6 116 aa11.78□□□□□ -0.52
IRF3-230ENST00000601809 TRAV9-2A0A087WT02 112 aa11.77□□□□□ -0.53
IRF3-230ENST00000601809 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.53
IRF3-230ENST00000601809 KRTAP10-2P60368 255 aa11.77□□□□□ -0.53
IRF3-230ENST00000601809 OR2D3Q8NGH3 330 aa11.77□□□□□ -0.53
IRF3-230ENST00000601809 OR10G8Q8NGN5 311 aa11.77□□□□□ -0.53
IRF3-230ENST00000601809 TRAV8-6A0A0B4J262 113 aa11.76□□□□□ -0.53
IRF3-230ENST00000601809 IBA57-AS1B1ANH7 110 aa11.76□□□□□ -0.53
IRF3-230ENST00000601809 NDUFS6O75380 124 aaKnown RBP11.76□□□□□ -0.53
IRF3-230ENST00000601809 RPS20P60866 119 aaKnown RBP11.76□□□□□ -0.53
IRF3-230ENST00000601809 RAB4BP61018 213 aa11.76□□□□□ -0.53
IRF3-230ENST00000601809 OR10J3Q5JRS4 329 aa11.76□□□□□ -0.53
IRF3-230ENST00000601809 NFE4Q86UQ8 179 aa11.76□□□□□ -0.53
IRF3-230ENST00000601809 Q8N3U1 123 aa11.76□□□□□ -0.53
IRF3-230ENST00000601809 C10orf126Q8N4M7 172 aa11.76□□□□□ -0.53
IRF3-230ENST00000601809 NUDT10Q8NFP7 164 aa11.76□□□□□ -0.53
IRF3-230ENST00000601809 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
IRF3-230ENST00000601809 NUDT11Q96G61 164 aa11.76□□□□□ -0.53
IRF3-230ENST00000601809 UBE2D3P61077 147 aa11.75□□□□□ -0.53
IRF3-230ENST00000601809 UBE2D2P62837 147 aa11.75□□□□□ -0.53
IRF3-230ENST00000601809 SPANXN1Q5VSR9 72 aa11.75□□□□□ -0.53
IRF3-230ENST00000601809 FER1L6-AS1Q8NA97 138 aa11.75□□□□□ -0.53
IRF3-230ENST00000601809 P01737 135 aa11.74□□□□□ -0.53
IRF3-230ENST00000601809 SPATA12Q7Z6I5 190 aa11.74□□□□□ -0.53
IRF3-230ENST00000601809 NEXN-AS1Q8NBZ9 246 aa11.74□□□□□ -0.53
IRF3-230ENST00000601809 DAZAP1Q96EP5 407 aaKnown RBP11.74□□□□□ -0.53
IRF3-230ENST00000601809 FAM210AQ96ND0 272 aa11.74□□□□□ -0.53
IRF3-230ENST00000601809 BIN3Q9NQY0 253 aa11.74□□□□□ -0.53
IRF3-230ENST00000601809 TRBV7-3A0A075B6L6 115 aa11.73□□□□□ -0.53
IRF3-230ENST00000601809 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
IRF3-230ENST00000601809 A0A087WWC5 75 aa11.72□□□□□ -0.53
IRF3-230ENST00000601809 C16orf90A8MZG2 172 aa11.72□□□□□ -0.53
IRF3-230ENST00000601809 CTRLP40313 264 aa11.72□□□□□ -0.53
IRF3-230ENST00000601809 TOR2AQ5JU69 321 aa11.72□□□□□ -0.53
IRF3-230ENST00000601809 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
IRF3-230ENST00000601809 RNASE7Q9H1E1 156 aaKnown RBP11.72□□□□□ -0.53
IRF3-230ENST00000601809 A0A087WTM6 91 aa11.71□□□□□ -0.53
IRF3-230ENST00000601809 IGHV3-30P01768 117 aa11.71□□□□□ -0.53
IRF3-230ENST00000601809 IGHV3-33P01772 117 aa11.71□□□□□ -0.53
IRF3-230ENST00000601809 IGHV3-30-3P0DP02 117 aa11.71□□□□□ -0.53
IRF3-230ENST00000601809 IGHV3-30-5P0DP03 117 aa11.71□□□□□ -0.53
IRF3-230ENST00000601809 RPL36AP83881 106 aaKnown RBP11.71□□□□□ -0.53
IRF3-230ENST00000601809 LAGE3Q14657 143 aa11.71□□□□□ -0.53
IRF3-230ENST00000601809 ZNF56Q15929 161 aa11.71□□□□□ -0.53
IRF3-230ENST00000601809 LYZL1Q6UWQ5 148 aa11.71□□□□□ -0.53
IRF3-230ENST00000601809 RPL36ALQ969Q0 106 aaKnown RBP11.71□□□□□ -0.53
IRF3-230ENST00000601809 XKRY2A2RUG3 117 aa11.7□□□□□ -0.54
IRF3-230ENST00000601809 F2Z2F3 143 aa11.7□□□□□ -0.54
IRF3-230ENST00000601809 SRP19P09132 144 aaKnown RBP11.7□□□□□ -0.54
IRF3-230ENST00000601809 SSTP61278 116 aa11.7□□□□□ -0.54
IRF3-230ENST00000601809 CACNG7P62955 275 aa11.7□□□□□ -0.54
IRF3-230ENST00000601809 WDR73Q6P4I2 378 aa11.7□□□□□ -0.54
IRF3-230ENST00000601809 FAM231DQ6ZW35 169 aa11.7□□□□□ -0.54
IRF3-230ENST00000601809 NIT1Q86X76 327 aa11.7□□□□□ -0.54
IRF3-230ENST00000601809 KRTAP17-1Q9BYP8 105 aa11.7□□□□□ -0.54
IRF3-230ENST00000601809 RPP21Q9H633 154 aaKnown RBP11.7□□□□□ -0.54
IRF3-230ENST00000601809 LRCOL1A6NCL2 159 aa11.69□□□□□ -0.54
IRF3-230ENST00000601809 ERVFC1-1P60608 527 aa11.69□□□□□ -0.54
IRF3-230ENST00000601809 GTSF1Q8WW33 167 aa11.69□□□□□ -0.54
IRF3-230ENST00000601809 TPPP3Q9BW30 176 aa11.69□□□□□ -0.54
IRF3-230ENST00000601809 DNAH8Q96JB1 4490 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms