RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PSG8Q9UQ74 426 aa9.97□□□□□ -0.81
IRF3-223ENST00000599223 KRTAP10-1P60331 282 aa9.96□□□□□ -0.82
IRF3-223ENST00000599223 WFDC10BQ8IUB3 73 aa9.96□□□□□ -0.82
IRF3-223ENST00000599223 TMEM183AQ8IXX5 376 aa9.96□□□□□ -0.82
IRF3-223ENST00000599223 IMMP2LQ96T52 175 aa9.96□□□□□ -0.82
IRF3-223ENST00000599223 OSTCQ9NRP0 149 aa9.96□□□□□ -0.82
IRF3-223ENST00000599223 MDFICQ9P1T7 246 aa9.96□□□□□ -0.82
IRF3-223ENST00000599223 A0A087WTM6 91 aa9.95□□□□□ -0.82
IRF3-223ENST00000599223 EPM2AB3EWF7 344 aa9.95□□□□□ -0.82
IRF3-223ENST00000599223 ZNF138P52744 262 aa9.95□□□□□ -0.82
IRF3-223ENST00000599223 ZNF415Q09FC8 603 aa9.95□□□□□ -0.82
IRF3-223ENST00000599223 PRR27Q6MZM9 219 aa9.95□□□□□ -0.82
IRF3-223ENST00000599223 NHLRC2Q8NBF2 726 aa9.95□□□□□ -0.82
IRF3-223ENST00000599223 ZNF479Q96JC4 524 aa9.95□□□□□ -0.82
IRF3-223ENST00000599223 SGK494Q96LW2 274 aa9.95□□□□□ -0.82
IRF3-223ENST00000599223 HHLA3Q9XRX5 114 aa9.95□□□□□ -0.82
IRF3-223ENST00000599223 TRAV8-1A0A0A6YYK1 113 aa9.94□□□□□ -0.82
IRF3-223ENST00000599223 K7EN84 100 aa9.94□□□□□ -0.82
IRF3-223ENST00000599223 K7EQD1 137 aa9.94□□□□□ -0.82
IRF3-223ENST00000599223 GATCO43716 136 aaKnown RBP9.94□□□□□ -0.82
IRF3-223ENST00000599223 FAM231DQ6ZW35 169 aa9.94□□□□□ -0.82
IRF3-223ENST00000599223 URGCP-MRPS24S4R325 110 aa9.94□□□□□ -0.82
IRF3-223ENST00000599223 FLG2Q5D862 2391 aaPredicted RBP9.94□□□□□ -0.82
IRF3-223ENST00000599223 P01737 135 aa9.93□□□□□ -0.82
IRF3-223ENST00000599223 MRPL23Q16540 153 aaKnown RBP9.93□□□□□ -0.82
IRF3-223ENST00000599223 CDPF1Q6NVV7 123 aa9.93□□□□□ -0.82
IRF3-223ENST00000599223 NEGR1Q7Z3B1 354 aa9.93□□□□□ -0.82
IRF3-223ENST00000599223 PGPEP1Q9NXJ5 209 aa9.93□□□□□ -0.82
IRF3-223ENST00000599223 TRBV7-9A0A0J9YWB2 115 aa9.92□□□□□ -0.82
IRF3-223ENST00000599223 IGLV2-11P01706 119 aa9.92□□□□□ -0.82
IRF3-223ENST00000599223 IGLV2-8P01709 118 aa9.92□□□□□ -0.82
IRF3-223ENST00000599223 Q5VSD8 79 aa9.92□□□□□ -0.82
IRF3-223ENST00000599223 MLST8Q9BVC4 326 aa9.92□□□□□ -0.82
IRF3-223ENST00000599223 RNASE7Q9H1E1 156 aaKnown RBP9.92□□□□□ -0.82
IRF3-223ENST00000599223 IL36BQ9NZH7 164 aa9.92□□□□□ -0.82
IRF3-223ENST00000599223 TRAV9-1A0A075B6T8 112 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 TRGV4A0A0C4DH28 118 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 LOC100131303A0A0U1RQF7 123 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 GYPEP15421 78 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 SRIP30626 198 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 HAMPP81172 84 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 ELOBQ15370 118 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 SMUG1Q53HV7 270 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 Q6AWC8 147 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 MSRB1Q9NZV6 116 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 DNAH8Q96JB1 4490 aa9.91□□□□□ -0.82
IRF3-223ENST00000599223 XKRY2A2RUG3 117 aa9.9□□□□□ -0.82
IRF3-223ENST00000599223 COLCA2A8K830 154 aa9.9□□□□□ -0.82
IRF3-223ENST00000599223 EREGO14944 169 aa9.9□□□□□ -0.82
IRF3-223ENST00000599223 RAB5AP20339 215 aa9.9□□□□□ -0.82
IRF3-223ENST00000599223 SLAQ13239 276 aa9.9□□□□□ -0.82
IRF3-223ENST00000599223 FAM162BQ5T6X4 162 aa9.9□□□□□ -0.82
IRF3-223ENST00000599223 NFE4Q86UQ8 179 aa9.9□□□□□ -0.82
IRF3-223ENST00000599223 RASL10AQ92737 203 aa9.9□□□□□ -0.82
IRF3-223ENST00000599223 RPP21Q9H633 154 aaKnown RBP9.9□□□□□ -0.82
IRF3-223ENST00000599223 TMA7Q9Y2S6 64 aaKnown RBP9.9□□□□□ -0.82
IRF3-223ENST00000599223 LENEPQ9Y5L5 61 aa9.9□□□□□ -0.82
IRF3-223ENST00000599223 SRRM2Q9UQ35 2752 aaKnown RBP9.89□□□□□ -0.83
IRF3-223ENST00000599223 TRBV24-1A0A075B6N3 115 aa9.89□□□□□ -0.83
IRF3-223ENST00000599223 A8MWL6 223 aa9.89□□□□□ -0.83
IRF3-223ENST00000599223 INAFM2P0DMQ5 153 aa9.89□□□□□ -0.83
IRF3-223ENST00000599223 CT83Q5H943 113 aa9.89□□□□□ -0.83
IRF3-223ENST00000599223 NUDT10Q8NFP7 164 aa9.89□□□□□ -0.83
IRF3-223ENST00000599223 NUDT11Q96G61 164 aa9.89□□□□□ -0.83
IRF3-223ENST00000599223 ZC2HC1AQ96GY0 325 aa9.89□□□□□ -0.83
IRF3-223ENST00000599223 NAGKQ9UJ70 344 aa9.89□□□□□ -0.83
IRF3-223ENST00000599223 V9GYV3 84 aa9.89□□□□□ -0.83
IRF3-223ENST00000599223 PFN1P07737 140 aaKnown RBP9.88□□□□□ -0.83
IRF3-223ENST00000599223 COX8CQ7Z4L0 72 aa9.88□□□□□ -0.83
IRF3-223ENST00000599223 TRGV11A0A075B6L2 103 aa9.87□□□□□ -0.83
IRF3-223ENST00000599223 TGIF2-C20orf24A0A0A6YYL0 155 aa9.87□□□□□ -0.83
IRF3-223ENST00000599223 TRAV4A0A0B4J268 109 aa9.87□□□□□ -0.83
IRF3-223ENST00000599223 IGHV3-16A0A0C4DH30 117 aa9.87□□□□□ -0.83
IRF3-223ENST00000599223 C1orf196B1AJZ1 125 aa9.87□□□□□ -0.83
IRF3-223ENST00000599223 RPS10P46783 165 aaKnown RBP9.87□□□□□ -0.83
IRF3-223ENST00000599223 RPS20P60866 119 aaKnown RBP9.87□□□□□ -0.83
IRF3-223ENST00000599223 TDRG1Q3Y452 100 aa9.87□□□□□ -0.83
IRF3-223ENST00000599223 TSKUQ8WUA8 353 aa9.87□□□□□ -0.83
IRF3-223ENST00000599223 C19orf71A6NCJ1 209 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 FABP5P3A8MUU1 101 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 GNRH2O43555 120 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
IRF3-223ENST00000599223 CRYGDP07320 174 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 EVI2AP22794 236 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 RAB5BP61020 215 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 COX19Q49B96 90 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 FAM159AQ6UWV7 190 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 OR2D3Q8NGH3 330 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 YPEL4Q96NS1 127 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 SPXQ9BT56 116 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 GFRA4Q9GZZ7 299 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 NAT8BQ9UHF3 227 aa9.86□□□□□ -0.83
IRF3-223ENST00000599223 TRAV9-2A0A087WT02 112 aa9.85□□□□□ -0.83
IRF3-223ENST00000599223 SMIM27A0A1W2PRY6 76 aa9.85□□□□□ -0.83
IRF3-223ENST00000599223 LRCOL1A6NCL2 159 aa9.85□□□□□ -0.83
IRF3-223ENST00000599223 FAM231BA6NCW3 169 aa9.85□□□□□ -0.83
IRF3-223ENST00000599223 ORM1P02763 201 aa9.85□□□□□ -0.83
IRF3-223ENST00000599223 TYMSP04818 313 aa9.85□□□□□ -0.83
IRF3-223ENST00000599223 CXCL1P09341 107 aa9.85□□□□□ -0.83
IRF3-223ENST00000599223 BORCS7Q96B45 105 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms