RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 LAGE3Q14657 143 aa12.02□□□□□ -0.49
CHMP2A-203ENST00000597209 ZFP82Q8N141 532 aa12.02□□□□□ -0.49
CHMP2A-203ENST00000597209 C14orf178Q8N769 122 aaPredicted RBP12.02□□□□□ -0.49
CHMP2A-203ENST00000597209 A0A087WWC5 75 aa12.01□□□□□ -0.49
CHMP2A-203ENST00000597209 TMSB15BA0A087X1C1 80 aa12.01□□□□□ -0.49
CHMP2A-203ENST00000597209 SCO2A0A1W2PP80 73 aa12.01□□□□□ -0.49
CHMP2A-203ENST00000597209 LRCOL1A6NCL2 159 aa12.01□□□□□ -0.49
CHMP2A-203ENST00000597209 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
CHMP2A-203ENST00000597209 IGHV3-33P01772 117 aa12.01□□□□□ -0.49
CHMP2A-203ENST00000597209 IGHV3-30-3P0DP02 117 aa12.01□□□□□ -0.49
CHMP2A-203ENST00000597209 IGHV3-30-5P0DP03 117 aa12.01□□□□□ -0.49
CHMP2A-203ENST00000597209 Q9UF83 564 aa12.01□□□□□ -0.49
CHMP2A-203ENST00000597209 A0A1B0GV50 99 aa12□□□□□ -0.49
CHMP2A-203ENST00000597209 PSCAO43653 123 aa12□□□□□ -0.49
CHMP2A-203ENST00000597209 FUSP35637 526 aaKnown RBP eCLIP12□□□□□ -0.49
CHMP2A-203ENST00000597209 BAGE2Q86Y30 109 aa12□□□□□ -0.49
CHMP2A-203ENST00000597209 TRAV1-1A0A0B4J248 108 aa11.99□□□□□ -0.49
CHMP2A-203ENST00000597209 M0R381 172 aa11.99□□□□□ -0.49
CHMP2A-203ENST00000597209 RAB5CP51148 216 aa11.99□□□□□ -0.49
CHMP2A-203ENST00000597209 FAM74A4Q5TZK3 123 aa11.99□□□□□ -0.49
CHMP2A-203ENST00000597209 A0A087WWL8 130 aa11.98□□□□□ -0.49
CHMP2A-203ENST00000597209 TRBV10-1A0A0K0K1A3 114 aa11.98□□□□□ -0.49
CHMP2A-203ENST00000597209 NTN5Q8WTR8 489 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-203ENST00000597209 SSBP4Q9BWG4 385 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-203ENST00000597209 TM2D2Q9BX73 214 aa11.98□□□□□ -0.49
CHMP2A-203ENST00000597209 Q9HAA7 133 aa11.98□□□□□ -0.49
CHMP2A-203ENST00000597209 MANBALQ9NQG1 85 aa11.98□□□□□ -0.49
CHMP2A-203ENST00000597209 SNAI2O43623 268 aa11.97□□□□□ -0.49
CHMP2A-203ENST00000597209 EIF5AL1Q6IS14 154 aaKnown RBP11.97□□□□□ -0.49
CHMP2A-203ENST00000597209 C11orf52Q96A22 123 aa11.97□□□□□ -0.49
CHMP2A-203ENST00000597209 TRAV8-3A0A0A6YYJ7 113 aa11.96□□□□□ -0.49
CHMP2A-203ENST00000597209 GCSHP23434 173 aa11.96□□□□□ -0.49
CHMP2A-203ENST00000597209 XGP55808 180 aa11.96□□□□□ -0.49
CHMP2A-203ENST00000597209 KRTAP10-1P60331 282 aa11.96□□□□□ -0.49
CHMP2A-203ENST00000597209 TOR2AQ5JU69 321 aa11.96□□□□□ -0.49
CHMP2A-203ENST00000597209 OR5AL1P0C617 328 aa11.95□□□□□ -0.5
CHMP2A-203ENST00000597209 RPL35P42766 123 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-203ENST00000597209 RAB4BP61018 213 aa11.95□□□□□ -0.5
CHMP2A-203ENST00000597209 CCL20P78556 96 aa11.95□□□□□ -0.5
CHMP2A-203ENST00000597209 RPL36AP83881 106 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-203ENST00000597209 RPL19P84098 196 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-203ENST00000597209 TCTE3Q8IZS6 198 aa11.95□□□□□ -0.5
CHMP2A-203ENST00000597209 Q8N814 137 aa11.95□□□□□ -0.5
CHMP2A-203ENST00000597209 OR10G8Q8NGN5 311 aa11.95□□□□□ -0.5
CHMP2A-203ENST00000597209 RPL36ALQ969Q0 106 aaKnown RBP11.95□□□□□ -0.5
CHMP2A-203ENST00000597209 TEX46H3BTG2 121 aa11.94□□□□□ -0.5
CHMP2A-203ENST00000597209 SULT1A2P50226 295 aa11.94□□□□□ -0.5
CHMP2A-203ENST00000597209 Q8N3U1 123 aa11.94□□□□□ -0.5
CHMP2A-203ENST00000597209 OR10AG1Q8NH19 301 aa11.94□□□□□ -0.5
CHMP2A-203ENST00000597209 GNG13Q9P2W3 67 aa11.94□□□□□ -0.5
CHMP2A-203ENST00000597209 TRBV7-3A0A075B6L6 115 aa11.93□□□□□ -0.5
CHMP2A-203ENST00000597209 IGLV5-52A0A0A0MRZ9 124 aa11.93□□□□□ -0.5
CHMP2A-203ENST00000597209 UBE2D3P61077 147 aa11.93□□□□□ -0.5
CHMP2A-203ENST00000597209 UBE2D2P62837 147 aa11.93□□□□□ -0.5
CHMP2A-203ENST00000597209 DAZ4Q86SG3 579 aaKnown RBP11.93□□□□□ -0.5
CHMP2A-203ENST00000597209 NIT1Q86X76 327 aa11.93□□□□□ -0.5
CHMP2A-203ENST00000597209 CHCHD7Q9BUK0 85 aa11.93□□□□□ -0.5
CHMP2A-203ENST00000597209 DAZ3Q9NR90 486 aaKnown RBP11.93□□□□□ -0.5
CHMP2A-203ENST00000597209 PRR27Q6MZM9 219 aa11.92□□□□□ -0.5
CHMP2A-203ENST00000597209 COX11Q9Y6N1 276 aa11.92□□□□□ -0.5
CHMP2A-203ENST00000597209 SPANXN1Q5VSR9 72 aa11.91□□□□□ -0.5
CHMP2A-203ENST00000597209 SMIM12Q96EX1 92 aa11.91□□□□□ -0.5
CHMP2A-203ENST00000597209 DERL1Q9BUN8 251 aa11.91□□□□□ -0.5
CHMP2A-203ENST00000597209 URGCP-MRPS24S4R325 110 aa11.91□□□□□ -0.5
CHMP2A-203ENST00000597209 EPM2AB3EWF7 344 aa11.9□□□□□ -0.5
CHMP2A-203ENST00000597209 TMEM70Q9BUB7 260 aa11.9□□□□□ -0.5
CHMP2A-203ENST00000597209 PDE6DO43924 150 aa11.89□□□□□ -0.51
CHMP2A-203ENST00000597209 IGLV2-8P01709 118 aa11.89□□□□□ -0.51
CHMP2A-203ENST00000597209 C1QBP02746 253 aa11.89□□□□□ -0.51
CHMP2A-203ENST00000597209 ELOBQ15370 118 aa11.89□□□□□ -0.51
CHMP2A-203ENST00000597209 ZNF56Q15929 161 aa11.89□□□□□ -0.51
CHMP2A-203ENST00000597209 CENPWQ5EE01 88 aa11.89□□□□□ -0.51
CHMP2A-203ENST00000597209 SLC51BQ86UW2 128 aa11.89□□□□□ -0.51
CHMP2A-203ENST00000597209 NEXN-AS1Q8NBZ9 246 aa11.89□□□□□ -0.51
CHMP2A-203ENST00000597209 RMI2Q96E14 147 aa11.89□□□□□ -0.51
CHMP2A-203ENST00000597209 IFNA1P01562 189 aa11.88□□□□□ -0.51
CHMP2A-203ENST00000597209 RPS20P60866 119 aaKnown RBP11.88□□□□□ -0.51
CHMP2A-203ENST00000597209 MEF2BQ02080 365 aaPredicted RBP11.88□□□□□ -0.51
CHMP2A-203ENST00000597209 KIF25-AS1Q9Y6Z4 181 aa11.88□□□□□ -0.51
CHMP2A-203ENST00000597209 A0A087WX48 190 aa11.87□□□□□ -0.51
CHMP2A-203ENST00000597209 TRBV6-8A0A0A6YYG3 113 aa11.87□□□□□ -0.51
CHMP2A-203ENST00000597209 C19orf71A6NCJ1 209 aa11.87□□□□□ -0.51
CHMP2A-203ENST00000597209 Q6ZNX1 250 aa11.87□□□□□ -0.51
CHMP2A-203ENST00000597209 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.87□□□□□ -0.51
CHMP2A-203ENST00000597209 DAZAP1Q96EP5 407 aaKnown RBP11.87□□□□□ -0.51
CHMP2A-203ENST00000597209 MUC21A0A0G2JKD1 596 aa11.86□□□□□ -0.51
CHMP2A-203ENST00000597209 MUC21A0A140T8X8 626 aa11.86□□□□□ -0.51
CHMP2A-203ENST00000597209 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
CHMP2A-203ENST00000597209 TAGLN2P37802 199 aaKnown RBP11.86□□□□□ -0.51
CHMP2A-203ENST00000597209 GNG4P50150 75 aa11.86□□□□□ -0.51
CHMP2A-203ENST00000597209 WFDC2Q14508 124 aa11.86□□□□□ -0.51
CHMP2A-203ENST00000597209 KCNIP4Q6PIL6 250 aa11.86□□□□□ -0.51
CHMP2A-203ENST00000597209 AP1S3Q96PC3 154 aa11.86□□□□□ -0.51
CHMP2A-203ENST00000597209 KLK12Q9UKR0 248 aa11.86□□□□□ -0.51
CHMP2A-203ENST00000597209 RAB19A4D1S5 217 aa11.85□□□□□ -0.51
CHMP2A-203ENST00000597209 SMIM17P0DL12 118 aa11.85□□□□□ -0.51
CHMP2A-203ENST00000597209 BCL2P10415 239 aa11.85□□□□□ -0.51
CHMP2A-203ENST00000597209 TMEM97Q5BJF2 176 aa11.85□□□□□ -0.51
CHMP2A-203ENST00000597209 ATRAIDQ6UW56 229 aa11.85□□□□□ -0.51
CHMP2A-203ENST00000597209 OR2D3Q8NGH3 330 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms