RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 SMDT1Q9H4I9 107 aa12.54□□□□□ -0.4
ZNF558-204ENST00000596172 EPPK1P58107 5090 aaKnown RBP12.54□□□□□ -0.4
ZNF558-204ENST00000596172 F2Z2F3 143 aa12.53□□□□□ -0.4
ZNF558-204ENST00000596172 FER1L6-AS1Q8NA97 138 aa12.53□□□□□ -0.4
ZNF558-204ENST00000596172 SMIM7Q9BQ49 75 aa12.53□□□□□ -0.4
ZNF558-204ENST00000596172 A0A087WWL8 130 aa12.52□□□□□ -0.41
ZNF558-204ENST00000596172 A0A1W2PPQ1 181 aa12.52□□□□□ -0.41
ZNF558-204ENST00000596172 GZMBP10144 247 aa12.52□□□□□ -0.41
ZNF558-204ENST00000596172 CEBPGP53567 150 aa12.52□□□□□ -0.41
ZNF558-204ENST00000596172 FAM231DQ6ZW35 169 aa12.52□□□□□ -0.41
ZNF558-204ENST00000596172 RNASE7Q9H1E1 156 aaKnown RBP12.52□□□□□ -0.41
ZNF558-204ENST00000596172 RPP21Q9H633 154 aaKnown RBP12.52□□□□□ -0.41
ZNF558-204ENST00000596172 ZNF727A8MUV8 499 aa12.51□□□□□ -0.41
ZNF558-204ENST00000596172 CACNG7P62955 275 aa12.51□□□□□ -0.41
ZNF558-204ENST00000596172 PEA15Q15121 130 aa12.51□□□□□ -0.41
ZNF558-204ENST00000596172 FAM74A3Q4VXF1 159 aa12.51□□□□□ -0.41
ZNF558-204ENST00000596172 TTC32Q5I0X7 151 aa12.51□□□□□ -0.41
ZNF558-204ENST00000596172 FAM74A4Q5TZK3 123 aa12.51□□□□□ -0.41
ZNF558-204ENST00000596172 WDR73Q6P4I2 378 aa12.51□□□□□ -0.41
ZNF558-204ENST00000596172 LINC00336Q6ZUF6 198 aa12.51□□□□□ -0.41
ZNF558-204ENST00000596172 FRAS1Q86XX4 4008 aa12.51□□□□□ -0.41
ZNF558-204ENST00000596172 SIVA1O15304 175 aa12.5□□□□□ -0.41
ZNF558-204ENST00000596172 LINC00694P0DN24 101 aa12.5□□□□□ -0.41
ZNF558-204ENST00000596172 LINC01551Q86U37 167 aa12.5□□□□□ -0.41
ZNF558-204ENST00000596172 C14orf178Q8N769 122 aaPredicted RBP12.5□□□□□ -0.41
ZNF558-204ENST00000596172 FAT2Q9NYQ8 4349 aa12.49□□□□□ -0.41
ZNF558-204ENST00000596172 MUC21A0A0G2JKD1 596 aa12.49□□□□□ -0.41
ZNF558-204ENST00000596172 TRBV10-1A0A0K0K1A3 114 aa12.49□□□□□ -0.41
ZNF558-204ENST00000596172 MUC21A0A140T8X8 626 aa12.49□□□□□ -0.41
ZNF558-204ENST00000596172 RTL8CO15255 209 aa12.49□□□□□ -0.41
ZNF558-204ENST00000596172 BTF3P20290 206 aaKnown RBP12.49□□□□□ -0.41
ZNF558-204ENST00000596172 RAB4BP61018 213 aa12.49□□□□□ -0.41
ZNF558-204ENST00000596172 SOHLH1Q5JUK2 328 aa12.49□□□□□ -0.41
ZNF558-204ENST00000596172 C1orf134Q5TEV5 83 aa12.49□□□□□ -0.41
ZNF558-204ENST00000596172 ATP6V0E2Q8NHE4 81 aa12.49□□□□□ -0.41
ZNF558-204ENST00000596172 TPPP3Q9BW30 176 aa12.49□□□□□ -0.41
ZNF558-204ENST00000596172 C9JQL5 133 aa12.48□□□□□ -0.41
ZNF558-204ENST00000596172 LYZL1Q6UWQ5 148 aa12.48□□□□□ -0.41
ZNF558-204ENST00000596172 AP1S3Q96PC3 154 aa12.48□□□□□ -0.41
ZNF558-204ENST00000596172 CNFNQ9BYD5 112 aa12.48□□□□□ -0.41
ZNF558-204ENST00000596172 GTSF1LQ9H1H1 148 aa12.48□□□□□ -0.41
ZNF558-204ENST00000596172 KIF25-AS1Q9Y6Z4 181 aa12.48□□□□□ -0.41
ZNF558-204ENST00000596172 K7EP13 123 aa12.47□□□□□ -0.41
ZNF558-204ENST00000596172 GATCO43716 136 aaKnown RBP12.47□□□□□ -0.41
ZNF558-204ENST00000596172 CTRLP40313 264 aa12.47□□□□□ -0.41
ZNF558-204ENST00000596172 RAB14P61106 215 aa12.47□□□□□ -0.41
ZNF558-204ENST00000596172 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
ZNF558-204ENST00000596172 TMEM241Q24JQ0 296 aa12.47□□□□□ -0.41
ZNF558-204ENST00000596172 CT83Q5H943 113 aa12.47□□□□□ -0.41
ZNF558-204ENST00000596172 Q9UF83 564 aa12.47□□□□□ -0.41
ZNF558-204ENST00000596172 GAGE12JA6NER3 117 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 A8MWL6 223 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 SMIM17P0DL12 118 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 LINC00315P59091 139 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 ERVFC1-1P60608 527 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 SSTP61278 116 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 GAGE1Q13065 139 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 GAGE4Q13068 117 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 GAGE5Q13069 117 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 GAGE13Q4V321 117 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 KRTAP1-5Q9BYS1 174 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 MSRB1Q9NZV6 116 aa12.46□□□□□ -0.41
ZNF558-204ENST00000596172 FOXA3P55318 350 aaPredicted RBP12.45□□□□□ -0.42
ZNF558-204ENST00000596172 LELP1Q5T871 98 aa12.45□□□□□ -0.42
ZNF558-204ENST00000596172 C6orf223Q8N319 242 aa12.45□□□□□ -0.42
ZNF558-204ENST00000596172 OR10G8Q8NGN5 311 aa12.45□□□□□ -0.42
ZNF558-204ENST00000596172 OSTCQ9NRP0 149 aa12.45□□□□□ -0.42
ZNF558-204ENST00000596172 DNAH10OSP0CZ25 163 aa12.44□□□□□ -0.42
ZNF558-204ENST00000596172 NTF3P20783 257 aa12.44□□□□□ -0.42
ZNF558-204ENST00000596172 ZNF56Q15929 161 aa12.44□□□□□ -0.42
ZNF558-204ENST00000596172 GTSF1Q8WW33 167 aa12.44□□□□□ -0.42
ZNF558-204ENST00000596172 TRAV9-2A0A087WT02 112 aa12.43□□□□□ -0.42
ZNF558-204ENST00000596172 TRAV8-6A0A0B4J262 113 aa12.43□□□□□ -0.42
ZNF558-204ENST00000596172 TRGC1P0CF51 173 aa12.43□□□□□ -0.42
ZNF558-204ENST00000596172 RPL36AP83881 106 aaKnown RBP12.43□□□□□ -0.42
ZNF558-204ENST00000596172 WFDC10BQ8IUB3 73 aa12.43□□□□□ -0.42
ZNF558-204ENST00000596172 RPL36ALQ969Q0 106 aaKnown RBP12.43□□□□□ -0.42
ZNF558-204ENST00000596172 NAT8Q9UHE5 227 aa12.43□□□□□ -0.42
ZNF558-204ENST00000596172 BIRC6Q9NR09 4857 aa12.42□□□□□ -0.42
ZNF558-204ENST00000596172 TRBV7-3A0A075B6L6 115 aa12.42□□□□□ -0.42
ZNF558-204ENST00000596172 A0A087WWC5 75 aa12.42□□□□□ -0.42
ZNF558-204ENST00000596172 FAM231BA6NCW3 169 aa12.42□□□□□ -0.42
ZNF558-204ENST00000596172 F5H697 171 aa12.42□□□□□ -0.42
ZNF558-204ENST00000596172 RPL23P62829 140 aaKnown RBP12.42□□□□□ -0.42
ZNF558-204ENST00000596172 CLLU1Q5K131 121 aa12.42□□□□□ -0.42
ZNF558-204ENST00000596172 ISOC2Q96AB3 205 aa12.42□□□□□ -0.42
ZNF558-204ENST00000596172 GFRA4Q9GZZ7 299 aa12.42□□□□□ -0.42
ZNF558-204ENST00000596172 HECTD4Q9Y4D8 3996 aa12.41□□□□□ -0.42
ZNF558-204ENST00000596172 IGHV3-38A0A0C4DH36 116 aa12.41□□□□□ -0.42
ZNF558-204ENST00000596172 PRSS29PA6NIE9 313 aa12.41□□□□□ -0.42
ZNF558-204ENST00000596172 EVI2AP22794 236 aa12.41□□□□□ -0.42
ZNF558-204ENST00000596172 UBE2D3P61077 147 aa12.41□□□□□ -0.42
ZNF558-204ENST00000596172 UBE2D2P62837 147 aa12.41□□□□□ -0.42
ZNF558-204ENST00000596172 C15orf54Q8N8G6 183 aa12.41□□□□□ -0.42
ZNF558-204ENST00000596172 TSKUQ8WUA8 353 aa12.41□□□□□ -0.42
ZNF558-204ENST00000596172 IFITM2Q01629 132 aa12.4□□□□□ -0.42
ZNF558-204ENST00000596172 TWIST1Q15672 202 aa12.4□□□□□ -0.42
ZNF558-204ENST00000596172 LINC01556Q5JQF7 62 aa12.4□□□□□ -0.42
ZNF558-204ENST00000596172 OR10J3Q5JRS4 329 aa12.4□□□□□ -0.42
ZNF558-204ENST00000596172 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms