RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 MEF2BQ02080 365 aaPredicted RBP8.82□□□□□ -1
USE1-207ENST00000596136 C10orf126Q8N4M7 172 aa8.82□□□□□ -1
USE1-207ENST00000596136 C14orf178Q8N769 122 aaPredicted RBP8.82□□□□□ -1
USE1-207ENST00000596136 SMIM12Q96EX1 92 aa8.82□□□□□ -1
USE1-207ENST00000596136 MSRB1Q9NZV6 116 aa8.82□□□□□ -1
USE1-207ENST00000596136 TRAV8-6A0A0B4J262 113 aa8.81□□□□□ -1
USE1-207ENST00000596136 M0R381 172 aa8.81□□□□□ -1
USE1-207ENST00000596136 IFNA1P01562 189 aa8.81□□□□□ -1
USE1-207ENST00000596136 OR5AL1P0C617 328 aa8.81□□□□□ -1
USE1-207ENST00000596136 BCL2P10415 239 aa8.81□□□□□ -1
USE1-207ENST00000596136 TAGLN2P37802 199 aaKnown RBP8.81□□□□□ -1
USE1-207ENST00000596136 SPATA12Q7Z6I5 190 aa8.81□□□□□ -1
USE1-207ENST00000596136 HSPG2P98160 4391 aa8.8□□□□□ -1
USE1-207ENST00000596136 PCLOQ9Y6V0 5065 aa8.8□□□□□ -1
USE1-207ENST00000596136 hCG_2014768A0A024R1R8 64 aa8.8□□□□□ -1
USE1-207ENST00000596136 C19orf71A6NCJ1 209 aa8.8□□□□□ -1
USE1-207ENST00000596136 GAGE12JA6NER3 117 aa8.8□□□□□ -1
USE1-207ENST00000596136 C16orf90A8MZG2 172 aa8.8□□□□□ -1
USE1-207ENST00000596136 KRTAP10-2P60368 255 aa8.8□□□□□ -1
USE1-207ENST00000596136 GAGE1Q13065 139 aa8.8□□□□□ -1
USE1-207ENST00000596136 GAGE4Q13068 117 aa8.8□□□□□ -1
USE1-207ENST00000596136 GAGE5Q13069 117 aa8.8□□□□□ -1
USE1-207ENST00000596136 GAGE13Q4V321 117 aa8.8□□□□□ -1
USE1-207ENST00000596136 CENPWQ5EE01 88 aa8.8□□□□□ -1
USE1-207ENST00000596136 VAX2Q9UIW0 290 aa8.8□□□□□ -1
USE1-207ENST00000596136 TRBV20OR9-2A0A075B6H5 130 aa8.79□□□□□ -1
USE1-207ENST00000596136 A0A087WWL8 130 aa8.79□□□□□ -1
USE1-207ENST00000596136 TRBV10-1A0A0K0K1A3 114 aa8.79□□□□□ -1
USE1-207ENST00000596136 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
USE1-207ENST00000596136 OR10J3Q5JRS4 329 aa8.79□□□□□ -1
USE1-207ENST00000596136 FAM74A4Q5TZK3 123 aa8.79□□□□□ -1
USE1-207ENST00000596136 PRR27Q6MZM9 219 aa8.79□□□□□ -1
USE1-207ENST00000596136 OR10AG1Q8NH19 301 aa8.79□□□□□ -1
USE1-207ENST00000596136 LYPD6BQ8NI32 183 aa8.79□□□□□ -1
USE1-207ENST00000596136 APOBP04114 4563 aaKnown RBP8.79□□□□□ -1
USE1-207ENST00000596136 A0A087WWC5 75 aa8.78□□□□□ -1
USE1-207ENST00000596136 RAB19A4D1S5 217 aa8.78□□□□□ -1
USE1-207ENST00000596136 GNG4P50150 75 aa8.78□□□□□ -1
USE1-207ENST00000596136 OR10G8Q8NGN5 311 aa8.78□□□□□ -1
USE1-207ENST00000596136 MED9Q9NWA0 146 aa8.78□□□□□ -1
USE1-207ENST00000596136 CDK2AP2O75956 126 aa8.77□□□□□ -1.01
USE1-207ENST00000596136 IGLC6P0CF74 106 aa8.77□□□□□ -1.01
USE1-207ENST00000596136 RAB4BP61018 213 aa8.77□□□□□ -1.01
USE1-207ENST00000596136 BLOC1S1P78537 153 aa8.77□□□□□ -1.01
USE1-207ENST00000596136 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
USE1-207ENST00000596136 KIF25-AS1Q9Y6Z4 181 aa8.77□□□□□ -1.01
USE1-207ENST00000596136 A0A087WTM6 91 aa8.76□□□□□ -1.01
USE1-207ENST00000596136 ERVFC1-1P60608 527 aa8.76□□□□□ -1.01
USE1-207ENST00000596136 RPS20P60866 119 aaKnown RBP8.76□□□□□ -1.01
USE1-207ENST00000596136 UBE2D3P61077 147 aa8.76□□□□□ -1.01
USE1-207ENST00000596136 UBE2D2P62837 147 aa8.76□□□□□ -1.01
USE1-207ENST00000596136 LAGE3Q14657 143 aa8.76□□□□□ -1.01
USE1-207ENST00000596136 ALKAL2Q6UX46 152 aa8.76□□□□□ -1.01
USE1-207ENST00000596136 DAZAP1Q96EP5 407 aaKnown RBP8.76□□□□□ -1.01
USE1-207ENST00000596136 BIN3Q9NQY0 253 aa8.76□□□□□ -1.01
USE1-207ENST00000596136 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
USE1-207ENST00000596136 A0A1B0GVG6 124 aa8.75□□□□□ -1.01
USE1-207ENST00000596136 EREGO14944 169 aa8.75□□□□□ -1.01
USE1-207ENST00000596136 RPL36AP83881 106 aaKnown RBP8.75□□□□□ -1.01
USE1-207ENST00000596136 SPANXN1Q5VSR9 72 aa8.75□□□□□ -1.01
USE1-207ENST00000596136 OR2D3Q8NGH3 330 aa8.75□□□□□ -1.01
USE1-207ENST00000596136 RPL36ALQ969Q0 106 aaKnown RBP8.75□□□□□ -1.01
USE1-207ENST00000596136 MUC21A0A0G2JKD1 596 aa8.74□□□□□ -1.01
USE1-207ENST00000596136 MUC21A0A140T8X8 626 aa8.74□□□□□ -1.01
USE1-207ENST00000596136 TMEM250H0YL14 139 aa8.74□□□□□ -1.01
USE1-207ENST00000596136 IGHV3-30P01768 117 aa8.74□□□□□ -1.01
USE1-207ENST00000596136 IGHV3-33P01772 117 aa8.74□□□□□ -1.01
USE1-207ENST00000596136 IGHV3-30-3P0DP02 117 aa8.74□□□□□ -1.01
USE1-207ENST00000596136 IGHV3-30-5P0DP03 117 aa8.74□□□□□ -1.01
USE1-207ENST00000596136 CDPF1Q6NVV7 123 aa8.74□□□□□ -1.01
USE1-207ENST00000596136 ABCA13Q86UQ4 5058 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 XKRY2A2RUG3 117 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 LRCOL1A6NCL2 159 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 RBFOX3A6NFN3 312 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 F2Z2F3 143 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 NDUFS6O75380 124 aaKnown RBP8.73□□□□□ -1.01
USE1-207ENST00000596136 P01737 135 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 GZMBP10144 247 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 Q8N3U1 123 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 FER1L6-AS1Q8NA97 138 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 NEXN-AS1Q8NBZ9 246 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 NUDT10Q8NFP7 164 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 NUDT11Q96G61 164 aa8.73□□□□□ -1.01
USE1-207ENST00000596136 K7EN84 100 aa8.72□□□□□ -1.01
USE1-207ENST00000596136 NKX2-5P52952 324 aaPredicted RBP8.72□□□□□ -1.01
USE1-207ENST00000596136 CACNG7P62955 275 aa8.72□□□□□ -1.01
USE1-207ENST00000596136 ZNF56Q15929 161 aa8.72□□□□□ -1.01
USE1-207ENST00000596136 WDR73Q6P4I2 378 aa8.72□□□□□ -1.01
USE1-207ENST00000596136 NIT1Q86X76 327 aa8.72□□□□□ -1.01
USE1-207ENST00000596136 OCC1Q8TAD7 63 aa8.72□□□□□ -1.01
USE1-207ENST00000596136 AP1S3Q96PC3 154 aa8.72□□□□□ -1.01
USE1-207ENST00000596136 CHCHD7Q9BUK0 85 aa8.72□□□□□ -1.01
USE1-207ENST00000596136 DAZ4Q86SG3 579 aaKnown RBP8.71□□□□□ -1.02
USE1-207ENST00000596136 KRTAP17-1Q9BYP8 105 aa8.71□□□□□ -1.02
USE1-207ENST00000596136 DAZ3Q9NR90 486 aaKnown RBP8.71□□□□□ -1.02
USE1-207ENST00000596136 TRAV8-3A0A0A6YYJ7 113 aa8.7□□□□□ -1.02
USE1-207ENST00000596136 SMIM17P0DL12 118 aa8.7□□□□□ -1.02
USE1-207ENST00000596136 CTRLP40313 264 aa8.7□□□□□ -1.02
USE1-207ENST00000596136 SSTP61278 116 aa8.7□□□□□ -1.02
USE1-207ENST00000596136 TOR2AQ5JU69 321 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms