RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 GAGE4Q13068 117 aa12.91□□□□□ -0.34
LTBP4-208ENST00000593738 GAGE5Q13069 117 aa12.91□□□□□ -0.34
LTBP4-208ENST00000593738 GAGE13Q4V321 117 aa12.91□□□□□ -0.34
LTBP4-208ENST00000593738 FAM74A4Q5TZK3 123 aa12.91□□□□□ -0.34
LTBP4-208ENST00000593738 PRR27Q6MZM9 219 aa12.91□□□□□ -0.34
LTBP4-208ENST00000593738 SMIM12Q96EX1 92 aa12.91□□□□□ -0.34
LTBP4-208ENST00000593738 SSBP4Q9BWG4 385 aaPredicted RBP12.91□□□□□ -0.34
LTBP4-208ENST00000593738 ERVFC1-1P60608 527 aa12.9□□□□□ -0.34
LTBP4-208ENST00000593738 RPL19P84098 196 aaKnown RBP12.9□□□□□ -0.34
LTBP4-208ENST00000593738 C9orf62Q8N4C0 152 aa12.9□□□□□ -0.34
LTBP4-208ENST00000593738 C14orf178Q8N769 122 aaPredicted RBP12.9□□□□□ -0.34
LTBP4-208ENST00000593738 DERL1Q9BUN8 251 aa12.9□□□□□ -0.34
LTBP4-208ENST00000593738 DNAH11Q96DT5 4516 aa12.9□□□□□ -0.34
LTBP4-208ENST00000593738 HERC2O95714 4834 aa12.89□□□□□ -0.35
LTBP4-208ENST00000593738 hCG_2014768A0A024R1R8 64 aa12.89□□□□□ -0.35
LTBP4-208ENST00000593738 A0A087WWC5 75 aa12.89□□□□□ -0.35
LTBP4-208ENST00000593738 A0A087WWL8 130 aa12.89□□□□□ -0.35
LTBP4-208ENST00000593738 SNAI2O43623 268 aa12.89□□□□□ -0.35
LTBP4-208ENST00000593738 OR5AL1P0C617 328 aa12.89□□□□□ -0.35
LTBP4-208ENST00000593738 VAX2Q9UIW0 290 aa12.89□□□□□ -0.35
LTBP4-208ENST00000593738 TRBV10-1A0A0K0K1A3 114 aa12.88□□□□□ -0.35
LTBP4-208ENST00000593738 IBA57-AS1B1ANH7 110 aa12.88□□□□□ -0.35
LTBP4-208ENST00000593738 BCL2P10415 239 aa12.88□□□□□ -0.35
LTBP4-208ENST00000593738 GNG4P50150 75 aa12.88□□□□□ -0.35
LTBP4-208ENST00000593738 CENPWQ5EE01 88 aa12.88□□□□□ -0.35
LTBP4-208ENST00000593738 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
LTBP4-208ENST00000593738 KIAA1109Q2LD37 5005 aa12.88□□□□□ -0.35
LTBP4-208ENST00000593738 CDK2AP2O75956 126 aa12.87□□□□□ -0.35
LTBP4-208ENST00000593738 IGLV2-8P01709 118 aa12.87□□□□□ -0.35
LTBP4-208ENST00000593738 KRTAP10-2P60368 255 aa12.87□□□□□ -0.35
LTBP4-208ENST00000593738 OR10AG1Q8NH19 301 aa12.87□□□□□ -0.35
LTBP4-208ENST00000593738 DAZAP1Q96EP5 407 aaKnown RBP12.87□□□□□ -0.35
LTBP4-208ENST00000593738 BIN3Q9NQY0 253 aa12.87□□□□□ -0.35
LTBP4-208ENST00000593738 MED9Q9NWA0 146 aa12.87□□□□□ -0.35
LTBP4-208ENST00000593738 Q9UF83 564 aa12.87□□□□□ -0.35
LTBP4-208ENST00000593738 DYNC1H1Q14204 4646 aaKnown RBP12.87□□□□□ -0.35
LTBP4-208ENST00000593738 RPS20P60866 119 aaKnown RBP12.86□□□□□ -0.35
LTBP4-208ENST00000593738 RAB4BP61018 213 aa12.86□□□□□ -0.35
LTBP4-208ENST00000593738 SPANXN1Q5VSR9 72 aa12.86□□□□□ -0.35
LTBP4-208ENST00000593738 RAB19A4D1S5 217 aa12.85□□□□□ -0.35
LTBP4-208ENST00000593738 RPL36AP83881 106 aaKnown RBP12.85□□□□□ -0.35
LTBP4-208ENST00000593738 RPL36ALQ969Q0 106 aaKnown RBP12.85□□□□□ -0.35
LTBP4-208ENST00000593738 A0A087WTM6 91 aa12.84□□□□□ -0.35
LTBP4-208ENST00000593738 C19orf71A6NCJ1 209 aa12.84□□□□□ -0.35
LTBP4-208ENST00000593738 IGHV3-30P01768 117 aa12.84□□□□□ -0.35
LTBP4-208ENST00000593738 IGHV3-33P01772 117 aa12.84□□□□□ -0.35
LTBP4-208ENST00000593738 IGHV3-30-3P0DP02 117 aa12.84□□□□□ -0.35
LTBP4-208ENST00000593738 IGHV3-30-5P0DP03 117 aa12.84□□□□□ -0.35
LTBP4-208ENST00000593738 BLOC1S1P78537 153 aa12.84□□□□□ -0.35
LTBP4-208ENST00000593738 LAGE3Q14657 143 aa12.84□□□□□ -0.35
LTBP4-208ENST00000593738 CDPF1Q6NVV7 123 aa12.84□□□□□ -0.35
LTBP4-208ENST00000593738 TRBV7-3A0A075B6L6 115 aa12.83□□□□□ -0.36
LTBP4-208ENST00000593738 XKRY2A2RUG3 117 aa12.83□□□□□ -0.36
LTBP4-208ENST00000593738 PSCAO43653 123 aa12.82□□□□□ -0.36
LTBP4-208ENST00000593738 OR2D3Q8NGH3 330 aa12.82□□□□□ -0.36
LTBP4-208ENST00000593738 OR10G8Q8NGN5 311 aa12.82□□□□□ -0.36
LTBP4-208ENST00000593738 TRBV20OR9-2A0A075B6H5 130 aa12.81□□□□□ -0.36
LTBP4-208ENST00000593738 P01737 135 aa12.81□□□□□ -0.36
LTBP4-208ENST00000593738 IGLC6P0CF74 106 aa12.81□□□□□ -0.36
LTBP4-208ENST00000593738 UBE2D3P61077 147 aa12.81□□□□□ -0.36
LTBP4-208ENST00000593738 UBE2D2P62837 147 aa12.81□□□□□ -0.36
LTBP4-208ENST00000593738 ZNF56Q15929 161 aa12.81□□□□□ -0.36
LTBP4-208ENST00000593738 ALKAL2Q6UX46 152 aa12.81□□□□□ -0.36
LTBP4-208ENST00000593738 FER1L6-AS1Q8NA97 138 aa12.81□□□□□ -0.36
LTBP4-208ENST00000593738 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
LTBP4-208ENST00000593738 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
LTBP4-208ENST00000593738 F2Z2F3 143 aa12.8□□□□□ -0.36
LTBP4-208ENST00000593738 SMIM17P0DL12 118 aa12.8□□□□□ -0.36
LTBP4-208ENST00000593738 TOR2AQ5JU69 321 aa12.8□□□□□ -0.36
LTBP4-208ENST00000593738 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
LTBP4-208ENST00000593738 CACNG7P62955 275 aa12.79□□□□□ -0.36
LTBP4-208ENST00000593738 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.79□□□□□ -0.36
LTBP4-208ENST00000593738 LYPD6BQ8NI32 183 aa12.79□□□□□ -0.36
LTBP4-208ENST00000593738 TM2D2Q9BX73 214 aa12.79□□□□□ -0.36
LTBP4-208ENST00000593738 Q9HAA7 133 aa12.79□□□□□ -0.36
LTBP4-208ENST00000593738 URGCP-MRPS24S4R325 110 aa12.79□□□□□ -0.36
LTBP4-208ENST00000593738 TRAV8-3A0A0A6YYJ7 113 aa12.78□□□□□ -0.36
LTBP4-208ENST00000593738 F5H697 171 aa12.78□□□□□ -0.36
LTBP4-208ENST00000593738 GZMBP10144 247 aa12.78□□□□□ -0.36
LTBP4-208ENST00000593738 NEXN-AS1Q8NBZ9 246 aa12.78□□□□□ -0.36
LTBP4-208ENST00000593738 KIF25-AS1Q9Y6Z4 181 aa12.78□□□□□ -0.36
LTBP4-208ENST00000593738 RBFOX3A6NFN3 312 aa12.77□□□□□ -0.37
LTBP4-208ENST00000593738 TMEM250H0YL14 139 aa12.77□□□□□ -0.37
LTBP4-208ENST00000593738 SSTP61278 116 aa12.77□□□□□ -0.37
LTBP4-208ENST00000593738 NIT1Q86X76 327 aa12.77□□□□□ -0.37
LTBP4-208ENST00000593738 CHCHD7Q9BUK0 85 aa12.77□□□□□ -0.37
LTBP4-208ENST00000593738 TPPP3Q9BW30 176 aa12.77□□□□□ -0.37
LTBP4-208ENST00000593738 DAZ4Q86SG3 579 aaKnown RBP12.76□□□□□ -0.37
LTBP4-208ENST00000593738 NUDT10Q8NFP7 164 aa12.76□□□□□ -0.37
LTBP4-208ENST00000593738 NUDT11Q96G61 164 aa12.76□□□□□ -0.37
LTBP4-208ENST00000593738 DAZ3Q9NR90 486 aaKnown RBP12.76□□□□□ -0.37
LTBP4-208ENST00000593738 LRCOL1A6NCL2 159 aa12.75□□□□□ -0.37
LTBP4-208ENST00000593738 ELOBQ15370 118 aa12.75□□□□□ -0.37
LTBP4-208ENST00000593738 WDR73Q6P4I2 378 aa12.75□□□□□ -0.37
LTBP4-208ENST00000593738 KCNIP4Q6PIL6 250 aa12.75□□□□□ -0.37
LTBP4-208ENST00000593738 Q8N3U1 123 aa12.75□□□□□ -0.37
LTBP4-208ENST00000593738 OCC1Q8TAD7 63 aa12.75□□□□□ -0.37
LTBP4-208ENST00000593738 TRBV6-8A0A0A6YYG3 113 aa12.74□□□□□ -0.37
LTBP4-208ENST00000593738 NDUFS6O75380 124 aaKnown RBP12.74□□□□□ -0.37
LTBP4-208ENST00000593738 TMEM97Q5BJF2 176 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms