RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 H3BMG7 143 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 RHOHQ15669 191 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 VPS13CQ709C8 3753 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.63□□□□□ -1.03
ZNF540-210ENST00000592533 B4DSR2 109 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 K7EQG2 157 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 SRD5A1P18405 259 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 ATP5J2P56134 94 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 SPTBN4Q9H254 2564 aa8.62□□□□□ -1.03
ZNF540-210ENST00000592533 TRAV12-3A0A0B4J271 114 aa8.62□□□□□ -1.03
ZNF540-210ENST00000592533 A0A0J9YY99 117 aa8.62□□□□□ -1.03
ZNF540-210ENST00000592533 AVPP01185 164 aa8.62□□□□□ -1.03
ZNF540-210ENST00000592533 GAGE13Q4V321 117 aa8.62□□□□□ -1.03
ZNF540-210ENST00000592533 SYT8Q8NBV8 401 aa8.62□□□□□ -1.03
ZNF540-210ENST00000592533 CELSR1Q9NYQ6 3014 aa8.62□□□□□ -1.03
ZNF540-210ENST00000592533 M0QY20 66 aa8.62□□□□□ -1.03
ZNF540-210ENST00000592533 SCGB2A2Q13296 93 aa8.62□□□□□ -1.03
ZNF540-210ENST00000592533 NFE4Q86UQ8 179 aa8.62□□□□□ -1.03
ZNF540-210ENST00000592533 ZNF256Q9Y2P7 627 aaPredicted RBP8.62□□□□□ -1.03
ZNF540-210ENST00000592533 A0A087WWL8 130 aa8.61□□□□□ -1.03
ZNF540-210ENST00000592533 RPL39P62891 51 aaKnown RBP8.61□□□□□ -1.03
ZNF540-210ENST00000592533 AMELXQ99217 191 aa8.61□□□□□ -1.03
ZNF540-210ENST00000592533 EDA2RQ9HAV5 297 aa8.61□□□□□ -1.03
ZNF540-210ENST00000592533 J3QR89 54 aa8.61□□□□□ -1.03
ZNF540-210ENST00000592533 SNRPD3P62318 126 aaKnown RBP8.61□□□□□ -1.03
ZNF540-210ENST00000592533 SCGB1D4Q6XE38 83 aa8.61□□□□□ -1.03
ZNF540-210ENST00000592533 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
ZNF540-210ENST00000592533 DSCR9P59020 149 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 UBE2D3P61077 147 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 UBE2D2P62837 147 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 CD300EQ496F6 205 aaPredicted RBP8.6□□□□□ -1.03
ZNF540-210ENST00000592533 SCGB1A1P11684 91 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 TRPT1Q86TN4 253 aaKnown RBP8.6□□□□□ -1.03
ZNF540-210ENST00000592533 SLC25A29Q8N8R3 303 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 ZNRF2Q8NHG8 242 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 SPATA25Q9BR10 227 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 NCOR2Q9Y618 2525 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 IGHV1OR15-1A0A075B7D0 117 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 TMEM238C9JI98 176 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 TMEM95Q3KNT9 176 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 AMTNQ6UX39 209 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 KLHL30-AS1Q8NEE0 82 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 ATP6V0E2Q8NHE4 81 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 MDFICQ9P1T7 246 aa8.6□□□□□ -1.03
ZNF540-210ENST00000592533 F5H697 171 aa8.59□□□□□ -1.03
ZNF540-210ENST00000592533 TSPAN13O95857 204 aa8.59□□□□□ -1.03
ZNF540-210ENST00000592533 TSPEAR-AS2P59090 65 aa8.59□□□□□ -1.03
ZNF540-210ENST00000592533 Q8N1Y9 231 aa8.59□□□□□ -1.03
ZNF540-210ENST00000592533 MRPL16Q9NX20 251 aaKnown RBP8.59□□□□□ -1.03
ZNF540-210ENST00000592533 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
ZNF540-210ENST00000592533 ZNF688P0C7X2 276 aa8.59□□□□□ -1.03
ZNF540-210ENST00000592533 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
ZNF540-210ENST00000592533 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
ZNF540-210ENST00000592533 CFAP126Q5VTH2 177 aa8.59□□□□□ -1.03
ZNF540-210ENST00000592533 DLX4Q92988 240 aaPredicted RBP8.59□□□□□ -1.03
ZNF540-210ENST00000592533 CHD8Q9HCK8 2581 aa8.59□□□□□ -1.03
ZNF540-210ENST00000592533 NDUFA11Q86Y39 141 aa8.58□□□□□ -1.04
ZNF540-210ENST00000592533 ETDBQ3ZM63 59 aa8.58□□□□□ -1.04
ZNF540-210ENST00000592533 SPAG8Q99932 426 aaPredicted RBP8.58□□□□□ -1.04
ZNF540-210ENST00000592533 IGHV4-59P01825 116 aa8.58□□□□□ -1.04
ZNF540-210ENST00000592533 LYRM7Q5U5X0 104 aa8.58□□□□□ -1.04
ZNF540-210ENST00000592533 A8MTW9 85 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 P0DMU3 169 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 ZNF56Q15929 161 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 DEFB112Q30KQ8 113 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 SH2D6Q7Z4S9 175 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 TMEM223A0PJW6 202 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 J3QLI3 93 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 J3QQQ9 107 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 WFDC12Q8WWY7 111 aa8.57□□□□□ -1.04
ZNF540-210ENST00000592533 TRGV11A0A075B6L2 103 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 TRAV12-2A0A075B6T6 113 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 A0A096LNT2 108 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 GAGE12HA6NDE8 117 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 LEPROTO15243 131 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 EMP1P54849 157 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 FAM74A4Q5TZK3 123 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 I3L3M4 83 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 TMEM170BQ5T4T1 132 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 C10orf99Q6UWK7 81 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 LINC01356Q8N9X3 169 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 SIGMAR1Q99720 223 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 TSSC4Q9Y5U2 329 aaPredicted RBP8.56□□□□□ -1.04
ZNF540-210ENST00000592533 ELANEP08246 267 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 SMCPP49901 116 aaPredicted RBP8.56□□□□□ -1.04
ZNF540-210ENST00000592533 C1QTNF4Q9BXJ3 329 aa8.56□□□□□ -1.04
ZNF540-210ENST00000592533 CFC1BP0CG36 223 aa8.55□□□□□ -1.04
ZNF540-210ENST00000592533 CFC1P0CG37 223 aa8.55□□□□□ -1.04
ZNF540-210ENST00000592533 SPINK13Q1W4C9 94 aa8.55□□□□□ -1.04
ZNF540-210ENST00000592533 CRYBA4P53673 196 aa8.55□□□□□ -1.04
ZNF540-210ENST00000592533 PIK3CD-AS1Q5SR53 167 aa8.55□□□□□ -1.04
ZNF540-210ENST00000592533 SBSPONQ8IVN8 264 aa8.55□□□□□ -1.04
ZNF540-210ENST00000592533 PYGO1Q9Y3Y4 419 aa8.55□□□□□ -1.04
ZNF540-210ENST00000592533 DOPEY1Q5JWR5 2465 aa8.55□□□□□ -1.04
ZNF540-210ENST00000592533 DOPEY2Q9Y3R5 2298 aa8.55□□□□□ -1.04
ZNF540-210ENST00000592533 TRBV20-1A0A075B6N2 111 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms