RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 ZFP82Q8N141 532 aa12.21□□□□□ -0.45
CIRBP-227ENST00000590188 C11orf52Q96A22 123 aa12.21□□□□□ -0.45
CIRBP-227ENST00000590188 SFRP2Q96HF1 295 aa12.21□□□□□ -0.45
CIRBP-227ENST00000590188 MSRB1Q9NZV6 116 aa12.21□□□□□ -0.45
CIRBP-227ENST00000590188 TRAV8-6A0A0B4J262 113 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 IGHV3-38A0A0C4DH36 116 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 RAB19A4D1S5 217 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 IGHV3-33P01772 117 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 IGHV3-30-3P0DP02 117 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 IGHV3-30-5P0DP03 117 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 TIRAPP58753 221 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 KRTAP10-2P60368 255 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 CENPWQ5EE01 88 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 GTSF1LQ9H1H1 148 aa12.2□□□□□ -0.46
CIRBP-227ENST00000590188 RHODO00212 210 aa12.19□□□□□ -0.46
CIRBP-227ENST00000590188 IFNA1P01562 189 aa12.19□□□□□ -0.46
CIRBP-227ENST00000590188 FUSP35637 526 aaKnown RBP eCLIP12.19□□□□□ -0.46
CIRBP-227ENST00000590188 LELP1Q5T871 98 aa12.19□□□□□ -0.46
CIRBP-227ENST00000590188 OR10AG1Q8NH19 301 aa12.19□□□□□ -0.46
CIRBP-227ENST00000590188 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
CIRBP-227ENST00000590188 NFE4Q86UQ8 179 aa12.18□□□□□ -0.46
CIRBP-227ENST00000590188 LINC00694P0DN24 101 aa12.17□□□□□ -0.46
CIRBP-227ENST00000590188 BCL2P10415 239 aa12.17□□□□□ -0.46
CIRBP-227ENST00000590188 ALKAL2Q6UX46 152 aa12.17□□□□□ -0.46
CIRBP-227ENST00000590188 MED9Q9NWA0 146 aa12.17□□□□□ -0.46
CIRBP-227ENST00000590188 A0A1B0GVG6 124 aa12.16□□□□□ -0.46
CIRBP-227ENST00000590188 IGLV2-8P01709 118 aa12.16□□□□□ -0.46
CIRBP-227ENST00000590188 GZMBP10144 247 aa12.16□□□□□ -0.46
CIRBP-227ENST00000590188 GNG4P50150 75 aa12.16□□□□□ -0.46
CIRBP-227ENST00000590188 NKX2-5P52952 324 aaPredicted RBP12.16□□□□□ -0.46
CIRBP-227ENST00000590188 ERVFC1-1P60608 527 aa12.16□□□□□ -0.46
CIRBP-227ENST00000590188 LINC01556Q5JQF7 62 aa12.16□□□□□ -0.46
CIRBP-227ENST00000590188 Q8N3U1 123 aa12.16□□□□□ -0.46
CIRBP-227ENST00000590188 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
CIRBP-227ENST00000590188 Q9HAA7 133 aa12.16□□□□□ -0.46
CIRBP-227ENST00000590188 PDE6DO43924 150 aa12.15□□□□□ -0.46
CIRBP-227ENST00000590188 CXCL1P09341 107 aa12.15□□□□□ -0.46
CIRBP-227ENST00000590188 SPANXN1Q5VSR9 72 aa12.15□□□□□ -0.46
CIRBP-227ENST00000590188 DAZAP1Q96EP5 407 aaKnown RBP12.15□□□□□ -0.46
CIRBP-227ENST00000590188 TPPP3Q9BW30 176 aa12.15□□□□□ -0.46
CIRBP-227ENST00000590188 APOBP04114 4563 aaKnown RBP12.15□□□□□ -0.47
CIRBP-227ENST00000590188 SNAI2O43623 268 aa12.14□□□□□ -0.47
CIRBP-227ENST00000590188 ZNF56Q15929 161 aa12.14□□□□□ -0.47
CIRBP-227ENST00000590188 VAX2Q9UIW0 290 aa12.14□□□□□ -0.47
CIRBP-227ENST00000590188 HSPG2P98160 4391 aa12.14□□□□□ -0.47
CIRBP-227ENST00000590188 RBFOX3A6NFN3 312 aa12.13□□□□□ -0.47
CIRBP-227ENST00000590188 K7EP13 123 aa12.13□□□□□ -0.47
CIRBP-227ENST00000590188 EREGO14944 169 aa12.13□□□□□ -0.47
CIRBP-227ENST00000590188 OR2D3Q8NGH3 330 aa12.13□□□□□ -0.47
CIRBP-227ENST00000590188 BOLA1Q9Y3E2 137 aa12.13□□□□□ -0.47
CIRBP-227ENST00000590188 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
CIRBP-227ENST00000590188 SSBP4Q9BWG4 385 aaPredicted RBP12.12□□□□□ -0.47
CIRBP-227ENST00000590188 A0A087WTM6 91 aa12.11□□□□□ -0.47
CIRBP-227ENST00000590188 C19orf71A6NCJ1 209 aa12.11□□□□□ -0.47
CIRBP-227ENST00000590188 IBA57-AS1B1ANH7 110 aa12.11□□□□□ -0.47
CIRBP-227ENST00000590188 PSCAO43653 123 aa12.11□□□□□ -0.47
CIRBP-227ENST00000590188 OR5AL1P0C617 328 aa12.11□□□□□ -0.47
CIRBP-227ENST00000590188 F5H697 171 aa12.1□□□□□ -0.47
CIRBP-227ENST00000590188 P01737 135 aa12.1□□□□□ -0.47
CIRBP-227ENST00000590188 RPL36AP83881 106 aaKnown RBP12.1□□□□□ -0.47
CIRBP-227ENST00000590188 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
CIRBP-227ENST00000590188 RPL36ALQ969Q0 106 aaKnown RBP12.1□□□□□ -0.47
CIRBP-227ENST00000590188 RAB4BP61018 213 aa12.09□□□□□ -0.47
CIRBP-227ENST00000590188 BLOC1S1P78537 153 aa12.09□□□□□ -0.47
CIRBP-227ENST00000590188 DAZ4Q86SG3 579 aaKnown RBP12.09□□□□□ -0.47
CIRBP-227ENST00000590188 DAZ3Q9NR90 486 aaKnown RBP12.09□□□□□ -0.47
CIRBP-227ENST00000590188 TRBV10-1A0A0K0K1A3 114 aa12.08□□□□□ -0.48
CIRBP-227ENST00000590188 IGLC6P0CF74 106 aa12.08□□□□□ -0.48
CIRBP-227ENST00000590188 SMIM17P0DL12 118 aa12.08□□□□□ -0.48
CIRBP-227ENST00000590188 RPS20P60866 119 aaKnown RBP12.08□□□□□ -0.48
CIRBP-227ENST00000590188 UBE2D3P61077 147 aa12.08□□□□□ -0.48
CIRBP-227ENST00000590188 UBE2D2P62837 147 aa12.08□□□□□ -0.48
CIRBP-227ENST00000590188 NEXN-AS1Q8NBZ9 246 aa12.08□□□□□ -0.48
CIRBP-227ENST00000590188 SMIM12Q96EX1 92 aa12.08□□□□□ -0.48
CIRBP-227ENST00000590188 PCLOQ9Y6V0 5065 aa12.08□□□□□ -0.48
CIRBP-227ENST00000590188 TRBV7-3A0A075B6L6 115 aa12.07□□□□□ -0.48
CIRBP-227ENST00000590188 A0A087WWC5 75 aa12.07□□□□□ -0.48
CIRBP-227ENST00000590188 MGPP08493 103 aa12.07□□□□□ -0.48
CIRBP-227ENST00000590188 TAGLN2P37802 199 aaKnown RBP12.07□□□□□ -0.48
CIRBP-227ENST00000590188 CEBPGP53567 150 aa12.07□□□□□ -0.48
CIRBP-227ENST00000590188 AP1S3Q96PC3 154 aa12.07□□□□□ -0.48
CIRBP-227ENST00000590188 KRTAP17-1Q9BYP8 105 aa12.07□□□□□ -0.48
CIRBP-227ENST00000590188 NUDT10Q8NFP7 164 aa12.06□□□□□ -0.48
CIRBP-227ENST00000590188 NUDT11Q96G61 164 aa12.06□□□□□ -0.48
CIRBP-227ENST00000590188 ABCA13Q86UQ4 5058 aa12.06□□□□□ -0.48
CIRBP-227ENST00000590188 XKRY2A2RUG3 117 aa12.05□□□□□ -0.48
CIRBP-227ENST00000590188 K7EN84 100 aa12.05□□□□□ -0.48
CIRBP-227ENST00000590188 CDK2AP2O75956 126 aa12.05□□□□□ -0.48
CIRBP-227ENST00000590188 TOR2AQ5JU69 321 aa12.05□□□□□ -0.48
CIRBP-227ENST00000590188 OCC1Q8TAD7 63 aa12.05□□□□□ -0.48
CIRBP-227ENST00000590188 RNASE7Q9H1E1 156 aaKnown RBP12.05□□□□□ -0.48
CIRBP-227ENST00000590188 BIN3Q9NQY0 253 aa12.05□□□□□ -0.48
CIRBP-227ENST00000590188 PGPEP1Q9NXJ5 209 aa12.05□□□□□ -0.48
CIRBP-227ENST00000590188 KIF25-AS1Q9Y6Z4 181 aa12.05□□□□□ -0.48
CIRBP-227ENST00000590188 URGCP-MRPS24S4R325 110 aa12.05□□□□□ -0.48
CIRBP-227ENST00000590188 LYZL1Q6UWQ5 148 aa12.04□□□□□ -0.48
CIRBP-227ENST00000590188 NIT1Q86X76 327 aa12.04□□□□□ -0.48
CIRBP-227ENST00000590188 OR10G8Q8NGN5 311 aa12.04□□□□□ -0.48
CIRBP-227ENST00000590188 LRCOL1A6NCL2 159 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms