RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 GAGE1Q13065 139 aa12.88□□□□□ -0.35
CCDC130-209ENST00000588809 GAGE4Q13068 117 aa12.88□□□□□ -0.35
CCDC130-209ENST00000588809 GAGE5Q13069 117 aa12.88□□□□□ -0.35
CCDC130-209ENST00000588809 LAGE3Q14657 143 aa12.88□□□□□ -0.35
CCDC130-209ENST00000588809 GAGE13Q4V321 117 aa12.88□□□□□ -0.35
CCDC130-209ENST00000588809 ZFP82Q8N141 532 aa12.88□□□□□ -0.35
CCDC130-209ENST00000588809 TMSB15BA0A087X1C1 80 aa12.87□□□□□ -0.35
CCDC130-209ENST00000588809 A0A087WWC5 75 aa12.86□□□□□ -0.35
CCDC130-209ENST00000588809 TRAV1-1A0A0B4J248 108 aa12.86□□□□□ -0.35
CCDC130-209ENST00000588809 LRCOL1A6NCL2 159 aa12.86□□□□□ -0.35
CCDC130-209ENST00000588809 M0R381 172 aa12.86□□□□□ -0.35
CCDC130-209ENST00000588809 FUSP35637 526 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC130-209ENST00000588809 FAM74A4Q5TZK3 123 aa12.86□□□□□ -0.35
CCDC130-209ENST00000588809 MANBALQ9NQG1 85 aa12.86□□□□□ -0.35
CCDC130-209ENST00000588809 A0A087WWL8 130 aa12.85□□□□□ -0.35
CCDC130-209ENST00000588809 IGHV3-30P01768 117 aa12.85□□□□□ -0.35
CCDC130-209ENST00000588809 IGHV3-33P01772 117 aa12.85□□□□□ -0.35
CCDC130-209ENST00000588809 IGHV3-30-3P0DP02 117 aa12.85□□□□□ -0.35
CCDC130-209ENST00000588809 IGHV3-30-5P0DP03 117 aa12.85□□□□□ -0.35
CCDC130-209ENST00000588809 RAB5CP51148 216 aa12.85□□□□□ -0.35
CCDC130-209ENST00000588809 BAGE2Q86Y30 109 aa12.85□□□□□ -0.35
CCDC130-209ENST00000588809 PSCAO43653 123 aa12.84□□□□□ -0.35
CCDC130-209ENST00000588809 TCTE3Q8IZS6 198 aa12.84□□□□□ -0.35
CCDC130-209ENST00000588809 C11orf52Q96A22 123 aa12.84□□□□□ -0.35
CCDC130-209ENST00000588809 TRBV10-1A0A0K0K1A3 114 aa12.83□□□□□ -0.36
CCDC130-209ENST00000588809 RPL35P42766 123 aaKnown RBP12.83□□□□□ -0.36
CCDC130-209ENST00000588809 CCL20P78556 96 aa12.83□□□□□ -0.36
CCDC130-209ENST00000588809 RPL19P84098 196 aaKnown RBP12.83□□□□□ -0.36
CCDC130-209ENST00000588809 EIF5AL1Q6IS14 154 aaKnown RBP12.83□□□□□ -0.36
CCDC130-209ENST00000588809 Q8N3U1 123 aa12.83□□□□□ -0.36
CCDC130-209ENST00000588809 SSBP4Q9BWG4 385 aaPredicted RBP12.83□□□□□ -0.36
CCDC130-209ENST00000588809 Q9HAA7 133 aa12.83□□□□□ -0.36
CCDC130-209ENST00000588809 SNAI2O43623 268 aa12.82□□□□□ -0.36
CCDC130-209ENST00000588809 GNG13Q9P2W3 67 aa12.82□□□□□ -0.36
CCDC130-209ENST00000588809 SRRM2Q9UQ35 2752 aaKnown RBP12.81□□□□□ -0.36
CCDC130-209ENST00000588809 FAT1Q14517 4588 aa12.81□□□□□ -0.36
CCDC130-209ENST00000588809 VPS13BQ7Z7G8 4022 aa12.81□□□□□ -0.36
CCDC130-209ENST00000588809 OR5AL1P0C617 328 aa12.81□□□□□ -0.36
CCDC130-209ENST00000588809 SULT1A2P50226 295 aa12.81□□□□□ -0.36
CCDC130-209ENST00000588809 KRTAP10-1P60331 282 aa12.81□□□□□ -0.36
CCDC130-209ENST00000588809 OR10AG1Q8NH19 301 aa12.81□□□□□ -0.36
CCDC130-209ENST00000588809 DERL1Q9BUN8 251 aa12.81□□□□□ -0.36
CCDC130-209ENST00000588809 XGP55808 180 aa12.8□□□□□ -0.36
CCDC130-209ENST00000588809 OR10G8Q8NGN5 311 aa12.8□□□□□ -0.36
CCDC130-209ENST00000588809 NTN5Q8WTR8 489 aaPredicted RBP12.8□□□□□ -0.36
CCDC130-209ENST00000588809 TRBV7-3A0A075B6L6 115 aa12.79□□□□□ -0.36
CCDC130-209ENST00000588809 TEX46H3BTG2 121 aa12.79□□□□□ -0.36
CCDC130-209ENST00000588809 RAB4BP61018 213 aa12.79□□□□□ -0.36
CCDC130-209ENST00000588809 UBE2D3P61077 147 aa12.79□□□□□ -0.36
CCDC130-209ENST00000588809 UBE2D2P62837 147 aa12.79□□□□□ -0.36
CCDC130-209ENST00000588809 PRR27Q6MZM9 219 aa12.79□□□□□ -0.36
CCDC130-209ENST00000588809 TM2D2Q9BX73 214 aa12.79□□□□□ -0.36
CCDC130-209ENST00000588809 TRAV8-3A0A0A6YYJ7 113 aa12.78□□□□□ -0.36
CCDC130-209ENST00000588809 GCSHP23434 173 aa12.78□□□□□ -0.36
CCDC130-209ENST00000588809 RPL36AP83881 106 aaKnown RBP12.78□□□□□ -0.36
CCDC130-209ENST00000588809 TOR2AQ5JU69 321 aa12.78□□□□□ -0.36
CCDC130-209ENST00000588809 DAZ4Q86SG3 579 aaKnown RBP12.78□□□□□ -0.36
CCDC130-209ENST00000588809 NIT1Q86X76 327 aa12.78□□□□□ -0.36
CCDC130-209ENST00000588809 Q8N814 137 aa12.78□□□□□ -0.36
CCDC130-209ENST00000588809 RPL36ALQ969Q0 106 aaKnown RBP12.78□□□□□ -0.36
CCDC130-209ENST00000588809 DAZ3Q9NR90 486 aaKnown RBP12.78□□□□□ -0.36
CCDC130-209ENST00000588809 DNAH8Q96JB1 4490 aa12.78□□□□□ -0.36
CCDC130-209ENST00000588809 IGLV2-8P01709 118 aa12.77□□□□□ -0.37
CCDC130-209ENST00000588809 C1QBP02746 253 aa12.77□□□□□ -0.37
CCDC130-209ENST00000588809 MEF2BQ02080 365 aaPredicted RBP12.77□□□□□ -0.37
CCDC130-209ENST00000588809 CENPWQ5EE01 88 aa12.77□□□□□ -0.37
CCDC130-209ENST00000588809 SMIM12Q96EX1 92 aa12.77□□□□□ -0.37
CCDC130-209ENST00000588809 SLC51BQ86UW2 128 aa12.76□□□□□ -0.37
CCDC130-209ENST00000588809 CHCHD7Q9BUK0 85 aa12.76□□□□□ -0.37
CCDC130-209ENST00000588809 IGLV5-52A0A0A0MRZ9 124 aa12.75□□□□□ -0.37
CCDC130-209ENST00000588809 PDE6DO43924 150 aa12.75□□□□□ -0.37
CCDC130-209ENST00000588809 ZNF56Q15929 161 aa12.75□□□□□ -0.37
CCDC130-209ENST00000588809 SPANXN1Q5VSR9 72 aa12.75□□□□□ -0.37
CCDC130-209ENST00000588809 Q6ZNX1 250 aa12.75□□□□□ -0.37
CCDC130-209ENST00000588809 URGCP-MRPS24S4R325 110 aa12.75□□□□□ -0.37
CCDC130-209ENST00000588809 C19orf71A6NCJ1 209 aa12.74□□□□□ -0.37
CCDC130-209ENST00000588809 NEXN-AS1Q8NBZ9 246 aa12.74□□□□□ -0.37
CCDC130-209ENST00000588809 KIF25-AS1Q9Y6Z4 181 aa12.74□□□□□ -0.37
CCDC130-209ENST00000588809 IFNA1P01562 189 aa12.73□□□□□ -0.37
CCDC130-209ENST00000588809 IGLC6P0CF74 106 aa12.73□□□□□ -0.37
CCDC130-209ENST00000588809 COX11Q9Y6N1 276 aa12.73□□□□□ -0.37
CCDC130-209ENST00000588809 TRBV20OR9-2A0A075B6H5 130 aa12.72□□□□□ -0.37
CCDC130-209ENST00000588809 MUC21A0A0G2JKD1 596 aa12.72□□□□□ -0.37
CCDC130-209ENST00000588809 MUC21A0A140T8X8 626 aa12.72□□□□□ -0.37
CCDC130-209ENST00000588809 BCL2P10415 239 aa12.72□□□□□ -0.37
CCDC130-209ENST00000588809 GNG4P50150 75 aa12.72□□□□□ -0.37
CCDC130-209ENST00000588809 WFDC2Q14508 124 aa12.72□□□□□ -0.37
CCDC130-209ENST00000588809 AP1S3Q96PC3 154 aa12.72□□□□□ -0.37
CCDC130-209ENST00000588809 TMEM70Q9BUB7 260 aa12.72□□□□□ -0.37
CCDC130-209ENST00000588809 TRBV6-8A0A0A6YYG3 113 aa12.71□□□□□ -0.37
CCDC130-209ENST00000588809 RAB19A4D1S5 217 aa12.71□□□□□ -0.37
CCDC130-209ENST00000588809 EPM2AB3EWF7 344 aa12.71□□□□□ -0.37
CCDC130-209ENST00000588809 RPS20P60866 119 aaKnown RBP12.71□□□□□ -0.37
CCDC130-209ENST00000588809 A0A087WX48 190 aa12.7□□□□□ -0.38
CCDC130-209ENST00000588809 GZMBP10144 247 aa12.7□□□□□ -0.38
CCDC130-209ENST00000588809 TAGLN2P37802 199 aaKnown RBP12.7□□□□□ -0.38
CCDC130-209ENST00000588809 ELOBQ15370 118 aa12.7□□□□□ -0.38
CCDC130-209ENST00000588809 ATRAIDQ6UW56 229 aa12.7□□□□□ -0.38
CCDC130-209ENST00000588809 RMI2Q96E14 147 aa12.7□□□□□ -0.38
CCDC130-209ENST00000588809 DAZAP1Q96EP5 407 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms