RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 C11orf21Q9P2W6 132 aa7.47□□□□□ -1.21
CSNK1D-226ENST00000585026 C7orf71A4D174 169 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 HIGD1CA8MV81 97 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 EPM2AB3EWF7 344 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 H3BNG1 76 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 EREGO14944 169 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 ORM1P02763 201 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 PRM2P04554 102 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 IGLC6P0CF74 106 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 RNASE4P34096 147 aaKnown RBP7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 TDRG1Q3Y452 100 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 WDR73Q6P4I2 378 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 ATP5L2Q7Z4Y8 100 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 C20orf144Q9BQM9 153 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 UPK3BQ9BT76 320 aa7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 SSBP4Q9BWG4 385 aaPredicted RBP7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 NOP10Q9NPE3 64 aaKnown RBP7.46□□□□□ -1.22
CSNK1D-226ENST00000585026 TRAV26-1A0A087WT03 109 aa7.45□□□□□ -1.22
CSNK1D-226ENST00000585026 A0A1B0GW15 77 aa7.45□□□□□ -1.22
CSNK1D-226ENST00000585026 F2Z2F3 143 aa7.45□□□□□ -1.22
CSNK1D-226ENST00000585026 LINC00467Q9BRT7 94 aa7.45□□□□□ -1.22
CSNK1D-226ENST00000585026 CNFNQ9BYD5 112 aa7.45□□□□□ -1.22
CSNK1D-226ENST00000585026 LRP1BQ9NZR2 4599 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 A0A1B0GXF2 115 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 SNURFLB1AK76 121 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 PHOX2AO14813 284 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 CTRLP40313 264 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 TCL1AP56279 114 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 KIR3DS1Q14943 382 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 GFI1BQ5VTD9 330 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 RNASE8Q8TDE3 154 aaKnown RBP7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 KCNS1Q96KK3 526 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 GNB1LQ9BYB4 327 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 PGPEP1Q9NXJ5 209 aa7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 MRPS16Q9Y3D3 137 aaKnown RBP7.44□□□□□ -1.22
CSNK1D-226ENST00000585026 A0A0J9YY99 117 aa7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 A0A1B0GUT8 65 aa7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 SNAI2O43623 268 aa7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 MT-ND6P03923 174 aa7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 OR5AL1P0C617 328 aa7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 GZMBP10144 247 aa7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 RPS10P46783 165 aaKnown RBP7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 KRTAP10-2P60368 255 aa7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 Q6ZQT7 251 aa7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 GATD1Q8NB37 220 aa7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 TP53TG3Q9ULZ0 132 aa7.43□□□□□ -1.22
CSNK1D-226ENST00000585026 TRAV12-3A0A0B4J271 114 aa7.42□□□□□ -1.22
CSNK1D-226ENST00000585026 S100A8P05109 93 aa7.42□□□□□ -1.22
CSNK1D-226ENST00000585026 RIGQ13278 110 aa7.42□□□□□ -1.22
CSNK1D-226ENST00000585026 ESRGQ1W209 222 aa7.42□□□□□ -1.22
CSNK1D-226ENST00000585026 ANXA2RQ3ZCQ2 193 aa7.42□□□□□ -1.22
CSNK1D-226ENST00000585026 LYZL1Q6UWQ5 148 aa7.42□□□□□ -1.22
CSNK1D-226ENST00000585026 FAM159AQ6UWV7 190 aa7.42□□□□□ -1.22
CSNK1D-226ENST00000585026 LINC00612Q8N6U2 182 aa7.42□□□□□ -1.22
CSNK1D-226ENST00000585026 FER1L6-AS1Q8NA97 138 aa7.42□□□□□ -1.22
CSNK1D-226ENST00000585026 PGLYRP4Q96LB8 373 aa7.42□□□□□ -1.22
CSNK1D-226ENST00000585026 IGHV1OR15-1A0A075B7D0 117 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 TMSB15BA0A087X1C1 80 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 GAGE12BA1L429 117 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 C1orf196B1AJZ1 125 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 J3KRW8 73 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 GAGE7O76087 117 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 GAGE12FP0CL80 117 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 GAGE12GP0CL81 117 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 GAGE12IP0CL82 117 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 INAFM2P0DMQ5 153 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 HBBP68871 147 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 CDPF1Q6NVV7 123 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 TMEM136Q6ZRR5 245 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 BORCS7Q96B45 105 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 KRTAP1-5Q9BYS1 174 aa7.41□□□□□ -1.22
CSNK1D-226ENST00000585026 GRIFINA4D1Z8 144 aa7.4□□□□□ -1.22
CSNK1D-226ENST00000585026 HLA-DQA1P01909 254 aa7.4□□□□□ -1.22
CSNK1D-226ENST00000585026 TRGC2P03986 189 aa7.4□□□□□ -1.22
CSNK1D-226ENST00000585026 ARMS2P0C7Q2 107 aa7.4□□□□□ -1.22
CSNK1D-226ENST00000585026 ASIPP42127 132 aa7.4□□□□□ -1.22
CSNK1D-226ENST00000585026 CACNG7P62955 275 aa7.4□□□□□ -1.22
CSNK1D-226ENST00000585026 MRPL54Q6P161 138 aaKnown RBP7.4□□□□□ -1.22
CSNK1D-226ENST00000585026 FRZBQ92765 325 aa7.4□□□□□ -1.22
CSNK1D-226ENST00000585026 TRAPPC1Q9Y5R8 145 aa7.4□□□□□ -1.22
CSNK1D-226ENST00000585026 TRGV2A0A075B6R0 118 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 IGHV3-16A0A0C4DH30 117 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 SIVA1O15304 175 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 GNRH2O43555 120 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 SPINK4O60575 86 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 RNASE3P12724 160 aaKnown RBP7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 NTF3P20783 257 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 LINC00315P59091 139 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 RAB5BP61020 215 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 DAZ2Q13117 558 aaKnown RBP7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 MUC21Q5SSG8 566 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 NFE4Q86UQ8 179 aa7.39□□□□□ -1.23
CSNK1D-226ENST00000585026 TRGV11A0A075B6L2 103 aa7.38□□□□□ -1.23
CSNK1D-226ENST00000585026 TRAV9-2A0A087WT02 112 aa7.38□□□□□ -1.23
CSNK1D-226ENST00000585026 NXPH4O95158 308 aa7.38□□□□□ -1.23
CSNK1D-226ENST00000585026 HOXA5P20719 270 aa7.38□□□□□ -1.23
CSNK1D-226ENST00000585026 FABP9Q0Z7S8 132 aa7.38□□□□□ -1.23
CSNK1D-226ENST00000585026 PIK3CD-AS1Q5SR53 167 aa7.38□□□□□ -1.23
CSNK1D-226ENST00000585026 DMRTA1Q5VZB9 504 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms