RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 IGLC6P0CF74 106 aa10.62□□□□□ -0.71
ITGB4-210ENST00000584025 UFSP1Q6NVU6 142 aa10.62□□□□□ -0.71
ITGB4-210ENST00000584025 LYPD5Q6UWN5 251 aa10.62□□□□□ -0.71
ITGB4-210ENST00000584025 Q6ZSN1 163 aa10.62□□□□□ -0.71
ITGB4-210ENST00000584025 SH2D6Q7Z4S9 175 aa10.62□□□□□ -0.71
ITGB4-210ENST00000584025 Q9H8V8 135 aa10.62□□□□□ -0.71
ITGB4-210ENST00000584025 LY96Q9Y6Y9 160 aa10.62□□□□□ -0.71
ITGB4-210ENST00000584025 GATCO43716 136 aaKnown RBP10.61□□□□□ -0.71
ITGB4-210ENST00000584025 CRYGDP07320 174 aa10.61□□□□□ -0.71
ITGB4-210ENST00000584025 SRSF3P84103 164 aaKnown RBP10.61□□□□□ -0.71
ITGB4-210ENST00000584025 UPK3BQ9BT76 320 aa10.61□□□□□ -0.71
ITGB4-210ENST00000584025 A0A1W2PPQ1 181 aa10.6□□□□□ -0.71
ITGB4-210ENST00000584025 C9JQL5 133 aa10.6□□□□□ -0.71
ITGB4-210ENST00000584025 F2Z2F3 143 aa10.6□□□□□ -0.71
ITGB4-210ENST00000584025 ERVFC1-1P60608 527 aa10.6□□□□□ -0.71
ITGB4-210ENST00000584025 CACNG7P62955 275 aa10.6□□□□□ -0.71
ITGB4-210ENST00000584025 C14orf178Q8N769 122 aaPredicted RBP10.6□□□□□ -0.71
ITGB4-210ENST00000584025 SMDT1Q9H4I9 107 aa10.6□□□□□ -0.71
ITGB4-210ENST00000584025 NBDYA0A0U1RRE5 68 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 GAGE12JA6NER3 117 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 SMIM17P0DL12 118 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 GAGE1Q13065 139 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 GAGE4Q13068 117 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 GAGE5Q13069 117 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 ZNF56Q15929 161 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 GAGE13Q4V321 117 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 FAM74A3Q4VXF1 159 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 LYZL1Q6UWQ5 148 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 Q6ZR54 194 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 FAM231DQ6ZW35 169 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 LINC01551Q86U37 167 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 AP1S3Q96PC3 154 aa10.59□□□□□ -0.71
ITGB4-210ENST00000584025 TMEM241Q24JQ0 296 aa10.58□□□□□ -0.72
ITGB4-210ENST00000584025 A8MWL6 223 aa10.57□□□□□ -0.72
ITGB4-210ENST00000584025 F5H697 171 aa10.57□□□□□ -0.72
ITGB4-210ENST00000584025 SIVA1O15304 175 aa10.57□□□□□ -0.72
ITGB4-210ENST00000584025 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
ITGB4-210ENST00000584025 CTRLP40313 264 aa10.56□□□□□ -0.72
ITGB4-210ENST00000584025 RAB4BP61018 213 aa10.56□□□□□ -0.72
ITGB4-210ENST00000584025 ADIRFQ15847 76 aa10.56□□□□□ -0.72
ITGB4-210ENST00000584025 TTC32Q5I0X7 151 aa10.56□□□□□ -0.72
ITGB4-210ENST00000584025 SOHLH1Q5JUK2 328 aa10.56□□□□□ -0.72
ITGB4-210ENST00000584025 MSRB1Q9NZV6 116 aa10.56□□□□□ -0.72
ITGB4-210ENST00000584025 Q9UF83 564 aa10.56□□□□□ -0.72
ITGB4-210ENST00000584025 NAT8Q9UHE5 227 aa10.56□□□□□ -0.72
ITGB4-210ENST00000584025 MGPP08493 103 aa10.55□□□□□ -0.72
ITGB4-210ENST00000584025 TRGC1P0CF51 173 aa10.55□□□□□ -0.72
ITGB4-210ENST00000584025 TIRAPP58753 221 aa10.55□□□□□ -0.72
ITGB4-210ENST00000584025 RPL23P62829 140 aaKnown RBP10.55□□□□□ -0.72
ITGB4-210ENST00000584025 IFITM2Q01629 132 aa10.55□□□□□ -0.72
ITGB4-210ENST00000584025 CLLU1Q5K131 121 aa10.55□□□□□ -0.72
ITGB4-210ENST00000584025 C1orf134Q5TEV5 83 aa10.55□□□□□ -0.72
ITGB4-210ENST00000584025 WDR73Q6P4I2 378 aa10.55□□□□□ -0.72
ITGB4-210ENST00000584025 C15orf54Q8N8G6 183 aa10.55□□□□□ -0.72
ITGB4-210ENST00000584025 OSTCQ9NRP0 149 aa10.55□□□□□ -0.72
ITGB4-210ENST00000584025 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
ITGB4-210ENST00000584025 NTF3P20783 257 aa10.54□□□□□ -0.72
ITGB4-210ENST00000584025 RPL36AP83881 106 aaKnown RBP10.54□□□□□ -0.72
ITGB4-210ENST00000584025 TWIST1Q15672 202 aa10.54□□□□□ -0.72
ITGB4-210ENST00000584025 CT83Q5H943 113 aa10.54□□□□□ -0.72
ITGB4-210ENST00000584025 GTSF1Q8WW33 167 aa10.54□□□□□ -0.72
ITGB4-210ENST00000584025 RPL36ALQ969Q0 106 aaKnown RBP10.54□□□□□ -0.72
ITGB4-210ENST00000584025 ISOC2Q96AB3 205 aa10.54□□□□□ -0.72
ITGB4-210ENST00000584025 PGLYRP4Q96LB8 373 aa10.54□□□□□ -0.72
ITGB4-210ENST00000584025 GTSF1LQ9H1H1 148 aa10.54□□□□□ -0.72
ITGB4-210ENST00000584025 TRAV8-6A0A0B4J262 113 aa10.53□□□□□ -0.72
ITGB4-210ENST00000584025 LINC00694P0DN24 101 aa10.53□□□□□ -0.72
ITGB4-210ENST00000584025 OR10J3Q5JRS4 329 aa10.53□□□□□ -0.72
ITGB4-210ENST00000584025 WFDC10BQ8IUB3 73 aa10.53□□□□□ -0.72
ITGB4-210ENST00000584025 KIF25-AS1Q9Y6Z4 181 aa10.53□□□□□ -0.72
ITGB4-210ENST00000584025 RTL8CO15255 209 aa10.52□□□□□ -0.73
ITGB4-210ENST00000584025 EVI2AP22794 236 aa10.52□□□□□ -0.73
ITGB4-210ENST00000584025 OR10G8Q8NGN5 311 aa10.52□□□□□ -0.73
ITGB4-210ENST00000584025 BORCS7Q96B45 105 aa10.52□□□□□ -0.73
ITGB4-210ENST00000584025 CNFNQ9BYD5 112 aa10.52□□□□□ -0.73
ITGB4-210ENST00000584025 KRTAP1-5Q9BYS1 174 aa10.52□□□□□ -0.73
ITGB4-210ENST00000584025 DPH3P1Q9H4G8 78 aa10.52□□□□□ -0.73
ITGB4-210ENST00000584025 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
ITGB4-210ENST00000584025 LINC00315P59091 139 aa10.51□□□□□ -0.73
ITGB4-210ENST00000584025 LELP1Q5T871 98 aa10.51□□□□□ -0.73
ITGB4-210ENST00000584025 LINC00336Q6ZUF6 198 aa10.51□□□□□ -0.73
ITGB4-210ENST00000584025 C6orf223Q8N319 242 aa10.51□□□□□ -0.73
ITGB4-210ENST00000584025 TSKUQ8WUA8 353 aa10.51□□□□□ -0.73
ITGB4-210ENST00000584025 V9GYV3 84 aa10.51□□□□□ -0.73
ITGB4-210ENST00000584025 TRAV9-2A0A087WT02 112 aa10.5□□□□□ -0.73
ITGB4-210ENST00000584025 SMIM15Q7Z3B0 74 aa10.5□□□□□ -0.73
ITGB4-210ENST00000584025 NEXN-AS1Q8NBZ9 246 aa10.5□□□□□ -0.73
ITGB4-210ENST00000584025 GFRA4Q9GZZ7 299 aa10.5□□□□□ -0.73
ITGB4-210ENST00000584025 PRSS29PA6NIE9 313 aa10.49□□□□□ -0.73
ITGB4-210ENST00000584025 HIGD1CA8MV81 97 aa10.49□□□□□ -0.73
ITGB4-210ENST00000584025 H7C1H1 209 aa10.49□□□□□ -0.73
ITGB4-210ENST00000584025 DNAH10OSP0CZ25 163 aa10.49□□□□□ -0.73
ITGB4-210ENST00000584025 FOXA3P55318 350 aaPredicted RBP10.49□□□□□ -0.73
ITGB4-210ENST00000584025 UBE2D3P61077 147 aa10.49□□□□□ -0.73
ITGB4-210ENST00000584025 UBE2D2P62837 147 aa10.49□□□□□ -0.73
ITGB4-210ENST00000584025 SUMO4Q6EEV6 95 aa10.49□□□□□ -0.73
ITGB4-210ENST00000584025 DNAH10Q8IVF4 4471 aa10.48□□□□□ -0.73
ITGB4-210ENST00000584025 A0A087WWC5 75 aa10.48□□□□□ -0.73
ITGB4-210ENST00000584025 IGHV3-38A0A0C4DH36 116 aa10.48□□□□□ -0.73
ITGB4-210ENST00000584025 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms