RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 X6R8D5 127 aa6.24□□□□□ -1.41
PDLIM1P3-201ENST00000582370 NXPH4O95158 308 aa6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 MT-ND6P03923 174 aa6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RBMY1A1P0DJD3 496 aaKnown RBP6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RBMY1CP0DJD4 496 aa6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SMIM17P0DL12 118 aa6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 NANOS2P60321 138 aaKnown RBP6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SLAQ13239 276 aa6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RBMY1FQ15415 496 aaKnown RBP6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 ZNF876PQ49A33 203 aa6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 AP1S3Q96PC3 154 aa6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 C11orf21Q9P2W6 132 aa6.23□□□□□ -1.41
PDLIM1P3-201ENST00000582370 TRBV24-1A0A075B6N3 115 aa6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 IGLL5B9A064 214 aa6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 H3BVH4 76 aa6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 GNRH2O43555 120 aa6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 SPINK4O60575 86 aa6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 PPP1R17O96001 155 aa6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 RNASE3P12724 160 aaKnown RBP6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 HBBP68871 147 aa6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 ZFP2Q6ZN57 461 aa6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 Q8NAQ8 132 aa6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 NUP35Q8NFH5 326 aa6.22□□□□□ -1.41
PDLIM1P3-201ENST00000582370 TMSB15BA0A087X1C1 80 aa6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 IGHV4-28A0A0C4DH34 117 aa6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 H7C1H1 209 aa6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 PRB4P10163 310 aaPredicted RBP6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 AZU1P20160 251 aa6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TWIST1Q15672 202 aa6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 LYZL1Q6UWQ5 148 aa6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GTSF1Q8WW33 167 aa6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TPPP3Q9BW30 176 aa6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GSN-AS1Q9NRJ2 163 aa6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 MDFICQ9P1T7 246 aa6.21□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TRGV2A0A075B6R0 118 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TRAV4A0A0B4J268 109 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GRIFINA4D1Z8 144 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 M0R381 172 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 PPBPP02775 128 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 NTF3P20783 257 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 FAM3BP58499 235 aaPredicted RBP6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 LINC00612Q8N6U2 182 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GATD1Q8NB37 220 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 PGLYRP4Q96LB8 373 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TMEM191AQ9H0A3 160 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 DPH3P1Q9H4G8 78 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 NOP10Q9NPE3 64 aaKnown RBP6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 DKK2Q9UBU2 259 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 MYCBP2O75592 4640 aa6.2□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TRGV1A0A0A0MS02 117 aa6.19□□□□□ -1.42
PDLIM1P3-201ENST00000582370 PLAC8L1A1L4L8 177 aa6.19□□□□□ -1.42
PDLIM1P3-201ENST00000582370 C16orf90A8MZG2 172 aa6.19□□□□□ -1.42
PDLIM1P3-201ENST00000582370 HLA-DQA1P01909 254 aa6.19□□□□□ -1.42
PDLIM1P3-201ENST00000582370 DAD1P61803 113 aa6.19□□□□□ -1.42
PDLIM1P3-201ENST00000582370 ELOBQ15370 118 aa6.19□□□□□ -1.42
PDLIM1P3-201ENST00000582370 OR4C5Q8NGB2 326 aa6.19□□□□□ -1.42
PDLIM1P3-201ENST00000582370 FAM210BQ96KR6 192 aa6.19□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GNB1LQ9BYB4 327 aa6.19□□□□□ -1.42
PDLIM1P3-201ENST00000582370 ATP5G1P05496 136 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 P0DMU3 169 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 FAM231AP0DMU4 169 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 FAM231CP0DMU5 169 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GZMBP10144 247 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 RAB4BP61018 213 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 FAM222AQ5U5X8 452 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 DMRTA1Q5VZB9 504 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 Q6ZQT7 251 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 SH2D6Q7Z4S9 175 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 OR10AG1Q8NH19 301 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 MRAP2Q96G30 205 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 LAMTOR2Q9Y2Q5 125 aa6.18□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TRBV10-1A0A0K0K1A3 114 aa6.17□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TRBV6-4A0A1B0GX49 114 aa6.17□□□□□ -1.42
PDLIM1P3-201ENST00000582370 A0A1B0GXF2 115 aa6.17□□□□□ -1.42
PDLIM1P3-201ENST00000582370 H3BNG1 76 aa6.17□□□□□ -1.42
PDLIM1P3-201ENST00000582370 M0R2N4 97 aa6.17□□□□□ -1.42
PDLIM1P3-201ENST00000582370 RS1O15537 224 aa6.17□□□□□ -1.42
PDLIM1P3-201ENST00000582370 EMP1P54849 157 aa6.17□□□□□ -1.42
PDLIM1P3-201ENST00000582370 URGCP-MRPS24S4R325 110 aa6.17□□□□□ -1.42
PDLIM1P3-201ENST00000582370 FAT1Q14517 4588 aa6.16□□□□□ -1.42
PDLIM1P3-201ENST00000582370 PHOX2AO14813 284 aa6.16□□□□□ -1.42
PDLIM1P3-201ENST00000582370 CAMPP49913 170 aa6.16□□□□□ -1.42
PDLIM1P3-201ENST00000582370 CFAP126Q5VTH2 177 aa6.16□□□□□ -1.42
PDLIM1P3-201ENST00000582370 Q6ZTI0 123 aa6.16□□□□□ -1.42
PDLIM1P3-201ENST00000582370 DNAJC30Q96LL9 226 aa6.16□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TRAV10A0A0B4J240 114 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TRGV4A0A0C4DH28 118 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GAGE12BA1L429 117 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 TCAPO15273 167 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GAGE7O76087 117 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GAGE12FP0CL80 117 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GAGE12GP0CL81 117 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 GAGE12IP0CL82 117 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 DEFB130BP0DP73 79 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 DEFB130AP0DP74 79 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 RHOHQ15669 191 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 FAM104BQ5XKR9 115 aa6.15□□□□□ -1.42
PDLIM1P3-201ENST00000582370 MRPL54Q6P161 138 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms