RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 M0R2N4 97 aa10.52□□□□□ -0.73
LITAF-217ENST00000575426 NXPH4O95158 308 aa10.52□□□□□ -0.73
LITAF-217ENST00000575426 IGLC6P0CF74 106 aa10.52□□□□□ -0.73
LITAF-217ENST00000575426 SRSF3P84103 164 aaKnown RBP10.52□□□□□ -0.73
LITAF-217ENST00000575426 LINC01551Q86U37 167 aa10.52□□□□□ -0.73
LITAF-217ENST00000575426 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.73
LITAF-217ENST00000575426 A8MWL6 223 aa10.51□□□□□ -0.73
LITAF-217ENST00000575426 C9JQL5 133 aa10.51□□□□□ -0.73
LITAF-217ENST00000575426 CRYGDP07320 174 aa10.51□□□□□ -0.73
LITAF-217ENST00000575426 SOHLH1Q5JUK2 328 aa10.51□□□□□ -0.73
LITAF-217ENST00000575426 UFSP1Q6NVU6 142 aa10.51□□□□□ -0.73
LITAF-217ENST00000575426 LYPD5Q6UWN5 251 aa10.51□□□□□ -0.73
LITAF-217ENST00000575426 LYZL1Q6UWQ5 148 aa10.51□□□□□ -0.73
LITAF-217ENST00000575426 C15orf54Q8N8G6 183 aa10.51□□□□□ -0.73
LITAF-217ENST00000575426 ZNRF2Q8NHG8 242 aa10.51□□□□□ -0.73
LITAF-217ENST00000575426 Q9H8V8 135 aa10.51□□□□□ -0.73
LITAF-217ENST00000575426 SACSQ9NZJ4 4579 aa10.5□□□□□ -0.73
LITAF-217ENST00000575426 ZNF56Q15929 161 aa10.5□□□□□ -0.73
LITAF-217ENST00000575426 CLLU1Q5K131 121 aa10.5□□□□□ -0.73
LITAF-217ENST00000575426 AP1S3Q96PC3 154 aa10.5□□□□□ -0.73
LITAF-217ENST00000575426 UPK3BQ9BT76 320 aa10.5□□□□□ -0.73
LITAF-217ENST00000575426 NAT8Q9UHE5 227 aa10.5□□□□□ -0.73
LITAF-217ENST00000575426 DNAH1Q9P2D7 4330 aa10.49□□□□□ -0.73
LITAF-217ENST00000575426 F5H697 171 aa10.49□□□□□ -0.73
LITAF-217ENST00000575426 RAB4BP61018 213 aa10.49□□□□□ -0.73
LITAF-217ENST00000575426 ADIRFQ15847 76 aa10.49□□□□□ -0.73
LITAF-217ENST00000575426 WDR73Q6P4I2 378 aa10.49□□□□□ -0.73
LITAF-217ENST00000575426 Q6ZSN1 163 aa10.49□□□□□ -0.73
LITAF-217ENST00000575426 OSTCQ9NRP0 149 aa10.49□□□□□ -0.73
LITAF-217ENST00000575426 GAGE12JA6NER3 117 aa10.48□□□□□ -0.73
LITAF-217ENST00000575426 TRGC1P0CF51 173 aa10.48□□□□□ -0.73
LITAF-217ENST00000575426 IFITM2Q01629 132 aa10.48□□□□□ -0.73
LITAF-217ENST00000575426 GAGE1Q13065 139 aa10.48□□□□□ -0.73
LITAF-217ENST00000575426 GAGE4Q13068 117 aa10.48□□□□□ -0.73
LITAF-217ENST00000575426 GAGE5Q13069 117 aa10.48□□□□□ -0.73
LITAF-217ENST00000575426 GAGE13Q4V321 117 aa10.48□□□□□ -0.73
LITAF-217ENST00000575426 C14orf178Q8N769 122 aaPredicted RBP10.48□□□□□ -0.73
LITAF-217ENST00000575426 ATP6V0E2Q8NHE4 81 aa10.48□□□□□ -0.73
LITAF-217ENST00000575426 RYR3Q15413 4870 aa10.48□□□□□ -0.73
LITAF-217ENST00000575426 SIVA1O15304 175 aa10.47□□□□□ -0.73
LITAF-217ENST00000575426 NTF3P20783 257 aa10.47□□□□□ -0.73
LITAF-217ENST00000575426 CTRLP40313 264 aa10.47□□□□□ -0.73
LITAF-217ENST00000575426 RPL23P62829 140 aaKnown RBP10.47□□□□□ -0.73
LITAF-217ENST00000575426 CT83Q5H943 113 aa10.47□□□□□ -0.73
LITAF-217ENST00000575426 BORCS7Q96B45 105 aa10.47□□□□□ -0.73
LITAF-217ENST00000575426 RYR2Q92736 4967 aa10.47□□□□□ -0.73
LITAF-217ENST00000575426 TRBV10-1A0A0K0K1A3 114 aa10.46□□□□□ -0.73
LITAF-217ENST00000575426 NBDYA0A0U1RRE5 68 aa10.46□□□□□ -0.73
LITAF-217ENST00000575426 RPL36AP83881 106 aaKnown RBP10.46□□□□□ -0.73
LITAF-217ENST00000575426 TWIST1Q15672 202 aa10.46□□□□□ -0.73
LITAF-217ENST00000575426 RPL36ALQ969Q0 106 aaKnown RBP10.46□□□□□ -0.73
LITAF-217ENST00000575426 ISOC2Q96AB3 205 aa10.46□□□□□ -0.73
LITAF-217ENST00000575426 MSRB1Q9NZV6 116 aa10.46□□□□□ -0.73
LITAF-217ENST00000575426 HYDINQ4G0P3 5121 aa10.46□□□□□ -0.74
LITAF-217ENST00000575426 VPS13DQ5THJ4 4388 aa10.45□□□□□ -0.74
LITAF-217ENST00000575426 MGPP08493 103 aa10.45□□□□□ -0.74
LITAF-217ENST00000575426 TIRAPP58753 221 aa10.45□□□□□ -0.74
LITAF-217ENST00000575426 TTC32Q5I0X7 151 aa10.45□□□□□ -0.74
LITAF-217ENST00000575426 SMIM15Q7Z3B0 74 aa10.45□□□□□ -0.74
LITAF-217ENST00000575426 OR10G8Q8NGN5 311 aa10.45□□□□□ -0.74
LITAF-217ENST00000575426 TSKUQ8WUA8 353 aa10.45□□□□□ -0.74
LITAF-217ENST00000575426 PGLYRP4Q96LB8 373 aa10.45□□□□□ -0.74
LITAF-217ENST00000575426 GTSF1LQ9H1H1 148 aa10.45□□□□□ -0.74
LITAF-217ENST00000575426 TRAV8-6A0A0B4J262 113 aa10.44□□□□□ -0.74
LITAF-217ENST00000575426 Q6ZR54 194 aa10.44□□□□□ -0.74
LITAF-217ENST00000575426 GTSF1Q8WW33 167 aa10.44□□□□□ -0.74
LITAF-217ENST00000575426 GFRA4Q9GZZ7 299 aa10.44□□□□□ -0.74
LITAF-217ENST00000575426 DPH3P1Q9H4G8 78 aa10.44□□□□□ -0.74
LITAF-217ENST00000575426 KIF25-AS1Q9Y6Z4 181 aa10.44□□□□□ -0.74
LITAF-217ENST00000575426 TRBV7-3A0A075B6L6 115 aa10.43□□□□□ -0.74
LITAF-217ENST00000575426 FAM231BA6NCW3 169 aa10.43□□□□□ -0.74
LITAF-217ENST00000575426 H7C1H1 209 aa10.43□□□□□ -0.74
LITAF-217ENST00000575426 EVI2AP22794 236 aa10.43□□□□□ -0.74
LITAF-217ENST00000575426 FOXA3P55318 350 aaPredicted RBP10.43□□□□□ -0.74
LITAF-217ENST00000575426 OR10J3Q5JRS4 329 aa10.43□□□□□ -0.74
LITAF-217ENST00000575426 C1orf134Q5TEV5 83 aa10.43□□□□□ -0.74
LITAF-217ENST00000575426 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.43□□□□□ -0.74
LITAF-217ENST00000575426 CNFNQ9BYD5 112 aa10.43□□□□□ -0.74
LITAF-217ENST00000575426 TRAV9-2A0A087WT02 112 aa10.42□□□□□ -0.74
LITAF-217ENST00000575426 LELP1Q5T871 98 aa10.42□□□□□ -0.74
LITAF-217ENST00000575426 Q9UF83 564 aa10.42□□□□□ -0.74
LITAF-217ENST00000575426 V9GYV3 84 aa10.42□□□□□ -0.74
LITAF-217ENST00000575426 A0A087WWC5 75 aa10.41□□□□□ -0.74
LITAF-217ENST00000575426 HIGD1CA8MV81 97 aa10.41□□□□□ -0.74
LITAF-217ENST00000575426 UQCC3Q6UW78 93 aa10.41□□□□□ -0.74
LITAF-217ENST00000575426 KMT2AQ03164 3969 aa10.41□□□□□ -0.74
LITAF-217ENST00000575426 A0A1B0GUT8 65 aa10.4□□□□□ -0.74
LITAF-217ENST00000575426 LINC00694P0DN24 101 aa10.4□□□□□ -0.74
LITAF-217ENST00000575426 LINC00315P59091 139 aa10.4□□□□□ -0.74
LITAF-217ENST00000575426 LINC00336Q6ZUF6 198 aa10.4□□□□□ -0.74
LITAF-217ENST00000575426 WFDC10BQ8IUB3 73 aa10.4□□□□□ -0.74
LITAF-217ENST00000575426 NEXN-AS1Q8NBZ9 246 aa10.4□□□□□ -0.74
LITAF-217ENST00000575426 NAT8BQ9UHF3 227 aa10.4□□□□□ -0.74
LITAF-217ENST00000575426 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.74
LITAF-217ENST00000575426 IGHV3-38A0A0C4DH36 116 aa10.39□□□□□ -0.75
LITAF-217ENST00000575426 UBE2D3P61077 147 aa10.39□□□□□ -0.75
LITAF-217ENST00000575426 UBE2D2P62837 147 aa10.39□□□□□ -0.75
LITAF-217ENST00000575426 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
LITAF-217ENST00000575426 RIGQ13278 110 aa10.39□□□□□ -0.75
LITAF-217ENST00000575426 SUMO4Q6EEV6 95 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms