RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 K7EP13 123 aa10.45□□□□□ -0.74
TVP23A-207ENST00000573360 RBX1P62877 108 aa10.45□□□□□ -0.74
TVP23A-207ENST00000573360 GTF2H5Q6ZYL4 71 aa10.45□□□□□ -0.74
TVP23A-207ENST00000573360 C4orf3Q8WVX3 66 aa10.45□□□□□ -0.74
TVP23A-207ENST00000573360 OVOL1O14753 267 aa10.44□□□□□ -0.74
TVP23A-207ENST00000573360 SEC11AP67812 179 aa10.44□□□□□ -0.74
TVP23A-207ENST00000573360 OCIAD2Q56VL3 154 aa10.44□□□□□ -0.74
TVP23A-207ENST00000573360 PRR9Q5T870 116 aa10.44□□□□□ -0.74
TVP23A-207ENST00000573360 MYOZ3Q8TDC0 251 aa10.44□□□□□ -0.74
TVP23A-207ENST00000573360 KLK9Q9UKQ9 250 aa10.44□□□□□ -0.74
TVP23A-207ENST00000573360 TSSC4Q9Y5U2 329 aaPredicted RBP10.44□□□□□ -0.74
TVP23A-207ENST00000573360 ANK3Q12955 4377 aaKnown RBP10.44□□□□□ -0.74
TVP23A-207ENST00000573360 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.44□□□□□ -0.74
TVP23A-207ENST00000573360 MGPP08493 103 aa10.44□□□□□ -0.74
TVP23A-207ENST00000573360 ZC2HC1BQ5TFG8 222 aa10.44□□□□□ -0.74
TVP23A-207ENST00000573360 ADAMTSL5Q6ZMM2 481 aa10.43□□□□□ -0.74
TVP23A-207ENST00000573360 RPL24P83731 157 aaKnown RBP10.43□□□□□ -0.74
TVP23A-207ENST00000573360 WFDC10AQ9H1F0 79 aa10.43□□□□□ -0.74
TVP23A-207ENST00000573360 K7ERU9 68 aa10.43□□□□□ -0.74
TVP23A-207ENST00000573360 HSD52Q0P140 79 aa10.43□□□□□ -0.74
TVP23A-207ENST00000573360 PPBPP02775 128 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 Q8N2B8 174 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 NXT2Q9NPJ8 142 aaKnown RBP10.42□□□□□ -0.74
TVP23A-207ENST00000573360 SMIM17P0DL12 118 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 OR2K2Q8NGT1 345 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 SPCS1Q9Y6A9 102 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 K7EMT4 169 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 GNRH2O43555 120 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 IGLC6P0CF74 106 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 RIPPLY3P57055 190 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 DCANP1Q8TF63 244 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 C11orf21Q9P2W6 132 aa10.42□□□□□ -0.74
TVP23A-207ENST00000573360 IGKCP01834 107 aa10.41□□□□□ -0.74
TVP23A-207ENST00000573360 NHP2Q9NX24 153 aaKnown RBP10.41□□□□□ -0.74
TVP23A-207ENST00000573360 IGKV3D-20A0A0C4DH25 116 aa10.41□□□□□ -0.74
TVP23A-207ENST00000573360 TMEM89A2RUT3 159 aa10.41□□□□□ -0.74
TVP23A-207ENST00000573360 RNF185Q96GF1 192 aa10.41□□□□□ -0.74
TVP23A-207ENST00000573360 CRLF1O75462 422 aa10.4□□□□□ -0.74
TVP23A-207ENST00000573360 COTL1Q14019 142 aa10.4□□□□□ -0.74
TVP23A-207ENST00000573360 BOD1L2Q8IYS8 172 aa10.4□□□□□ -0.74
TVP23A-207ENST00000573360 IGKV2D-26A0A0A0MRZ7 120 aa10.4□□□□□ -0.74
TVP23A-207ENST00000573360 K7ERJ3 54 aa10.4□□□□□ -0.74
TVP23A-207ENST00000573360 RPL35AP18077 110 aaKnown RBP10.4□□□□□ -0.74
TVP23A-207ENST00000573360 KLK9Q2XQG4 91 aa10.4□□□□□ -0.74
TVP23A-207ENST00000573360 ATP6V0BQ99437 205 aa10.4□□□□□ -0.74
TVP23A-207ENST00000573360 U3KQK5 164 aa10.4□□□□□ -0.74
TVP23A-207ENST00000573360 CD7P09564 240 aa10.39□□□□□ -0.75
TVP23A-207ENST00000573360 XCL2Q9UBD3 114 aa10.39□□□□□ -0.75
TVP23A-207ENST00000573360 C9orf118A6NHY6 69 aa10.39□□□□□ -0.75
TVP23A-207ENST00000573360 SMIM13P0DJ93 91 aa10.39□□□□□ -0.75
TVP23A-207ENST00000573360 FGF6P10767 208 aa10.39□□□□□ -0.75
TVP23A-207ENST00000573360 FABP2P12104 132 aa10.39□□□□□ -0.75
TVP23A-207ENST00000573360 MRPL35Q9NZE8 188 aaKnown RBP10.39□□□□□ -0.75
TVP23A-207ENST00000573360 DPM2O94777 84 aa10.39□□□□□ -0.75
TVP23A-207ENST00000573360 CDKN1BP46527 198 aa10.39□□□□□ -0.75
TVP23A-207ENST00000573360 ANXA2RQ3ZCQ2 193 aa10.39□□□□□ -0.75
TVP23A-207ENST00000573360 ZNF580Q9UK33 172 aa10.39□□□□□ -0.75
TVP23A-207ENST00000573360 PROK1P58294 105 aa10.38□□□□□ -0.75
TVP23A-207ENST00000573360 KRTAP10-3P60369 221 aa10.38□□□□□ -0.75
TVP23A-207ENST00000573360 PHLDA3Q9Y5J5 127 aa10.38□□□□□ -0.75
TVP23A-207ENST00000573360 FAM159AQ6UWV7 190 aa10.38□□□□□ -0.75
TVP23A-207ENST00000573360 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
TVP23A-207ENST00000573360 GATD1Q8NB37 220 aa10.38□□□□□ -0.75
TVP23A-207ENST00000573360 MGAM2Q2M2H8 2515 aa10.38□□□□□ -0.75
TVP23A-207ENST00000573360 H3BRM9 83 aa10.38□□□□□ -0.75
TVP23A-207ENST00000573360 FAM74A4Q5TZK3 123 aa10.38□□□□□ -0.75
TVP23A-207ENST00000573360 K7EQG2 157 aa10.37□□□□□ -0.75
TVP23A-207ENST00000573360 SOCS3O14543 225 aa10.37□□□□□ -0.75
TVP23A-207ENST00000573360 BRI3O95415 125 aa10.37□□□□□ -0.75
TVP23A-207ENST00000573360 DEFB114Q30KQ6 69 aa10.37□□□□□ -0.75
TVP23A-207ENST00000573360 LINC00477Q96M19 166 aa10.37□□□□□ -0.75
TVP23A-207ENST00000573360 FXYD2P54710 66 aa10.37□□□□□ -0.75
TVP23A-207ENST00000573360 LAGE3Q14657 143 aa10.37□□□□□ -0.75
TVP23A-207ENST00000573360 ODF1Q14990 250 aa10.37□□□□□ -0.75
TVP23A-207ENST00000573360 SPATA3Q8NHX4 192 aa10.37□□□□□ -0.75
TVP23A-207ENST00000573360 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
TVP23A-207ENST00000573360 TRRAPQ9Y4A5 3859 aa10.36□□□□□ -0.75
TVP23A-207ENST00000573360 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
TVP23A-207ENST00000573360 SAMD5Q5TGI4 173 aa10.36□□□□□ -0.75
TVP23A-207ENST00000573360 HIST1H4GQ99525 98 aa10.36□□□□□ -0.75
TVP23A-207ENST00000573360 F5H697 171 aa10.36□□□□□ -0.75
TVP23A-207ENST00000573360 ATP5LO75964 103 aa10.36□□□□□ -0.75
TVP23A-207ENST00000573360 Q8N8P6 123 aa10.36□□□□□ -0.75
TVP23A-207ENST00000573360 C9orf47Q6ZRZ4 202 aa10.36□□□□□ -0.75
TVP23A-207ENST00000573360 SCGB3A1Q96QR1 104 aa10.36□□□□□ -0.75
TVP23A-207ENST00000573360 ZFAND2AQ8N6M9 145 aa10.35□□□□□ -0.75
TVP23A-207ENST00000573360 TRAV21A0A0B4J279 112 aa10.35□□□□□ -0.75
TVP23A-207ENST00000573360 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
TVP23A-207ENST00000573360 LGALS9O00182 355 aa10.35□□□□□ -0.75
TVP23A-207ENST00000573360 NEGR1Q7Z3B1 354 aa10.35□□□□□ -0.75
TVP23A-207ENST00000573360 RNF152Q8N8N0 203 aa10.35□□□□□ -0.75
TVP23A-207ENST00000573360 SFTA2Q6UW10 78 aa10.35□□□□□ -0.75
TVP23A-207ENST00000573360 STHQ8IWL8 128 aa10.35□□□□□ -0.75
TVP23A-207ENST00000573360 NBEAL1Q6ZS30 2694 aa10.35□□□□□ -0.75
TVP23A-207ENST00000573360 FBN1P35555 2871 aaKnown RBP10.34□□□□□ -0.75
TVP23A-207ENST00000573360 MTURNQ8N3F0 131 aa10.34□□□□□ -0.75
TVP23A-207ENST00000573360 TRBV25-1A0A075B6N4 114 aa10.34□□□□□ -0.75
TVP23A-207ENST00000573360 IGHV3-73A0A0B4J1V6 119 aa10.34□□□□□ -0.75
TVP23A-207ENST00000573360 A0A0J9YX75 114 aa10.34□□□□□ -0.75
TVP23A-207ENST00000573360 EMP1P54849 157 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms