RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 NDUFAF3Q9BU61 184 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 NAT8BQ9UHF3 227 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
SF3B3-212ENST00000568539 TRGV2A0A075B6R0 118 aa5.99□□□□□ -1.45
SF3B3-212ENST00000568539 NTF3P20783 257 aa5.99□□□□□ -1.45
SF3B3-212ENST00000568539 NANOS2P60321 138 aaKnown RBP5.99□□□□□ -1.45
SF3B3-212ENST00000568539 SSTP61278 116 aa5.99□□□□□ -1.45
SF3B3-212ENST00000568539 DAD1P61803 113 aa5.99□□□□□ -1.45
SF3B3-212ENST00000568539 CACNG7P62955 275 aa5.99□□□□□ -1.45
SF3B3-212ENST00000568539 POM121L12Q8N7R1 296 aa5.99□□□□□ -1.45
SF3B3-212ENST00000568539 IMMP2LQ96T52 175 aa5.99□□□□□ -1.45
SF3B3-212ENST00000568539 MSRB1Q9NZV6 116 aa5.99□□□□□ -1.45
SF3B3-212ENST00000568539 A0A1B0GUT8 65 aa5.98□□□□□ -1.45
SF3B3-212ENST00000568539 A8MWV9 139 aa5.98□□□□□ -1.45
SF3B3-212ENST00000568539 RS1O15537 224 aa5.98□□□□□ -1.45
SF3B3-212ENST00000568539 ATP6V1G1O75348 118 aa5.98□□□□□ -1.45
SF3B3-212ENST00000568539 FAM3BP58499 235 aaPredicted RBP5.98□□□□□ -1.45
SF3B3-212ENST00000568539 CFAP126Q5VTH2 177 aa5.98□□□□□ -1.45
SF3B3-212ENST00000568539 Q6ZTC4 211 aa5.98□□□□□ -1.45
SF3B3-212ENST00000568539 BORCS7Q96B45 105 aa5.98□□□□□ -1.45
SF3B3-212ENST00000568539 JPT2Q9H910 190 aa5.98□□□□□ -1.45
SF3B3-212ENST00000568539 TRAV4A0A0B4J268 109 aa5.97□□□□□ -1.45
SF3B3-212ENST00000568539 IGHV3-53P01767 116 aa5.97□□□□□ -1.45
SF3B3-212ENST00000568539 ATP5G1P05496 136 aa5.97□□□□□ -1.45
SF3B3-212ENST00000568539 TWIST1Q15672 202 aa5.97□□□□□ -1.45
SF3B3-212ENST00000568539 UFSP1Q6NVU6 142 aa5.97□□□□□ -1.45
SF3B3-212ENST00000568539 KCNIP4Q6PIL6 250 aa5.97□□□□□ -1.45
SF3B3-212ENST00000568539 OR4C5Q8NGB2 326 aa5.97□□□□□ -1.45
SF3B3-212ENST00000568539 ZNF479Q96JC4 524 aa5.97□□□□□ -1.45
SF3B3-212ENST00000568539 AP1S3Q96PC3 154 aa5.97□□□□□ -1.45
SF3B3-212ENST00000568539 SAMD10Q9BYL1 202 aa5.97□□□□□ -1.45
SF3B3-212ENST00000568539 HUWE1Q7Z6Z7 4374 aaKnown RBP5.97□□□□□ -1.45
SF3B3-212ENST00000568539 A0A087WWL8 130 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 A0A1B0GXF2 115 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 CRYGDP07320 174 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 TRGC1P0CF51 173 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 HOXA5P20719 270 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 EVI2AP22794 236 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 S100A1P23297 94 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 S100PP25815 95 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 RIGQ13278 110 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 ZFP2Q6ZN57 461 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 C14orf178Q8N769 122 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-212ENST00000568539 BTF3L4Q96K17 158 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 KIF25-AS1Q9Y6Z4 181 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 URGCP-MRPS24S4R325 110 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 HERC2O95714 4834 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 RYR1P21817 5038 aa5.96□□□□□ -1.46
SF3B3-212ENST00000568539 TRAV9-1A0A075B6T8 112 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 DEFB131BA0A096LNP1 70 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 TRAV10A0A0B4J240 114 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 A0A1B0GW15 77 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 RHODO00212 210 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 CIDEAO60543 219 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 HTN3P15516 51 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 LINC00315P59091 139 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 HBBP68871 147 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 FHL2Q14192 279 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 FAM74A4Q5TZK3 123 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 MRPL54Q6P161 138 aaKnown RBP5.95□□□□□ -1.46
SF3B3-212ENST00000568539 ATP5L2Q7Z4Y8 100 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 CBLN2Q8IUK8 224 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 YPEL4Q96NS1 127 aa5.95□□□□□ -1.46
SF3B3-212ENST00000568539 IGHV3-73A0A0B4J1V6 119 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 TRGV4A0A0C4DH28 118 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 SMIM17P0DL12 118 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 CAMPP49913 170 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 ELOBQ15370 118 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 TMEM88Q6PEY1 159 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 Q6ZSN1 163 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 SMIM15Q7Z3B0 74 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 GATD1Q8NB37 220 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 PHLDA1Q8WV24 401 aaPredicted RBP5.94□□□□□ -1.46
SF3B3-212ENST00000568539 WWC2-AS2Q96NR7 200 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 TMEM191AQ9H0A3 160 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 DPH3P1Q9H4G8 78 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 SMCO4Q9NRQ5 59 aa5.94□□□□□ -1.46
SF3B3-212ENST00000568539 TRBV24-1A0A075B6N3 115 aa5.93□□□□□ -1.46
SF3B3-212ENST00000568539 TGIF2-C20orf24A0A0A6YYL0 155 aa5.93□□□□□ -1.46
SF3B3-212ENST00000568539 F5H768 121 aa5.93□□□□□ -1.46
SF3B3-212ENST00000568539 S100A8P05109 93 aa5.93□□□□□ -1.46
SF3B3-212ENST00000568539 GATA1P15976 413 aaPredicted RBP5.93□□□□□ -1.46
SF3B3-212ENST00000568539 RASL11AQ6T310 242 aa5.93□□□□□ -1.46
SF3B3-212ENST00000568539 PRO0255Q9UI72 69 aa5.93□□□□□ -1.46
SF3B3-212ENST00000568539 HHLA3Q9XRX5 114 aa5.93□□□□□ -1.46
SF3B3-212ENST00000568539 TRBV6-4A0A1B0GX49 114 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 SCO1O75880 301 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 MGPP08493 103 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 RAB4AP20338 218 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 CRYBA4P53673 196 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 RAB4BP61018 213 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 SLAQ13239 276 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 ZNF56Q15929 161 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 CEMP1Q6PRD7 247 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-212ENST00000568539 AMN1Q8IY45 258 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 SLC25A29Q8N8R3 303 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 MUC7Q8TAX7 377 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 RNF185Q96GF1 192 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 VSIG2Q96IQ7 327 aa5.92□□□□□ -1.46
SF3B3-212ENST00000568539 TRAV26-1A0A087WT03 109 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms