RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 Q6ZNX1 250 aa12.26□□□□□ -0.45
COMMD4-218ENST00000567377 SAMD10Q9BYL1 202 aa12.26□□□□□ -0.45
COMMD4-218ENST00000567377 TRBV10-1A0A0K0K1A3 114 aa12.25□□□□□ -0.45
COMMD4-218ENST00000567377 GAGE12JA6NER3 117 aa12.25□□□□□ -0.45
COMMD4-218ENST00000567377 IFNA1P01562 189 aa12.25□□□□□ -0.45
COMMD4-218ENST00000567377 RPL35P42766 123 aaKnown RBP12.25□□□□□ -0.45
COMMD4-218ENST00000567377 GAGE1Q13065 139 aa12.25□□□□□ -0.45
COMMD4-218ENST00000567377 GAGE4Q13068 117 aa12.25□□□□□ -0.45
COMMD4-218ENST00000567377 GAGE5Q13069 117 aa12.25□□□□□ -0.45
COMMD4-218ENST00000567377 LAGE3Q14657 143 aa12.25□□□□□ -0.45
COMMD4-218ENST00000567377 GAGE13Q4V321 117 aa12.25□□□□□ -0.45
COMMD4-218ENST00000567377 FAM74A4Q5TZK3 123 aa12.25□□□□□ -0.45
COMMD4-218ENST00000567377 SMIM12Q96EX1 92 aa12.25□□□□□ -0.45
COMMD4-218ENST00000567377 A0A087WTM6 91 aa12.24□□□□□ -0.45
COMMD4-218ENST00000567377 PDE6DO43924 150 aa12.24□□□□□ -0.45
COMMD4-218ENST00000567377 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
COMMD4-218ENST00000567377 TAGLN2P37802 199 aaKnown RBP12.24□□□□□ -0.45
COMMD4-218ENST00000567377 CCL20P78556 96 aa12.24□□□□□ -0.45
COMMD4-218ENST00000567377 SSBP4Q9BWG4 385 aaPredicted RBP12.24□□□□□ -0.45
COMMD4-218ENST00000567377 LRP1BQ9NZR2 4599 aa12.23□□□□□ -0.45
COMMD4-218ENST00000567377 SNAI2O43623 268 aa12.23□□□□□ -0.45
COMMD4-218ENST00000567377 PSCAO43653 123 aa12.23□□□□□ -0.45
COMMD4-218ENST00000567377 C14orf178Q8N769 122 aaPredicted RBP12.23□□□□□ -0.45
COMMD4-218ENST00000567377 RYR1P21817 5038 aa12.23□□□□□ -0.45
COMMD4-218ENST00000567377 A0A087WWL8 130 aa12.22□□□□□ -0.45
COMMD4-218ENST00000567377 RPL36AP83881 106 aaKnown RBP12.22□□□□□ -0.45
COMMD4-218ENST00000567377 MEF2BQ02080 365 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-218ENST00000567377 TOR2AQ5JU69 321 aa12.22□□□□□ -0.45
COMMD4-218ENST00000567377 RPL36ALQ969Q0 106 aaKnown RBP12.22□□□□□ -0.45
COMMD4-218ENST00000567377 TM2D2Q9BX73 214 aa12.22□□□□□ -0.45
COMMD4-218ENST00000567377 BIN3Q9NQY0 253 aa12.22□□□□□ -0.45
COMMD4-218ENST00000567377 RPS20P60866 119 aaKnown RBP12.21□□□□□ -0.45
COMMD4-218ENST00000567377 RAB4BP61018 213 aa12.21□□□□□ -0.45
COMMD4-218ENST00000567377 PRR27Q6MZM9 219 aa12.21□□□□□ -0.45
COMMD4-218ENST00000567377 AKAP14Q86UN6 197 aa12.21□□□□□ -0.45
COMMD4-218ENST00000567377 DAZAP1Q96EP5 407 aaKnown RBP12.21□□□□□ -0.45
COMMD4-218ENST00000567377 TRAV8-3A0A0A6YYJ7 113 aa12.2□□□□□ -0.46
COMMD4-218ENST00000567377 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
COMMD4-218ENST00000567377 IGHV3-33P01772 117 aa12.2□□□□□ -0.46
COMMD4-218ENST00000567377 IGHV3-30-3P0DP02 117 aa12.2□□□□□ -0.46
COMMD4-218ENST00000567377 IGHV3-30-5P0DP03 117 aa12.2□□□□□ -0.46
COMMD4-218ENST00000567377 RPL19P84098 196 aaKnown RBP12.2□□□□□ -0.46
COMMD4-218ENST00000567377 SPANXN1Q5VSR9 72 aa12.2□□□□□ -0.46
COMMD4-218ENST00000567377 TRBV7-3A0A075B6L6 115 aa12.19□□□□□ -0.46
COMMD4-218ENST00000567377 XKRY2A2RUG3 117 aa12.19□□□□□ -0.46
COMMD4-218ENST00000567377 GNG4P50150 75 aa12.19□□□□□ -0.46
COMMD4-218ENST00000567377 CENPWQ5EE01 88 aa12.19□□□□□ -0.46
COMMD4-218ENST00000567377 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-218ENST00000567377 OR10G8Q8NGN5 311 aa12.19□□□□□ -0.46
COMMD4-218ENST00000567377 OR10AG1Q8NH19 301 aa12.19□□□□□ -0.46
COMMD4-218ENST00000567377 DERL1Q9BUN8 251 aa12.19□□□□□ -0.46
COMMD4-218ENST00000567377 VAX2Q9UIW0 290 aa12.19□□□□□ -0.46
COMMD4-218ENST00000567377 BCL2P10415 239 aa12.18□□□□□ -0.46
COMMD4-218ENST00000567377 CHCHD7Q9BUK0 85 aa12.18□□□□□ -0.46
COMMD4-218ENST00000567377 MED9Q9NWA0 146 aa12.18□□□□□ -0.46
COMMD4-218ENST00000567377 Q9UF83 564 aa12.18□□□□□ -0.46
COMMD4-218ENST00000567377 COX11Q9Y6N1 276 aa12.18□□□□□ -0.46
COMMD4-218ENST00000567377 URGCP-MRPS24S4R325 110 aa12.18□□□□□ -0.46
COMMD4-218ENST00000567377 SMIM17P0DL12 118 aa12.17□□□□□ -0.46
COMMD4-218ENST00000567377 NTN5Q8WTR8 489 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-218ENST00000567377 KRTAP17-1Q9BYP8 105 aa12.17□□□□□ -0.46
COMMD4-218ENST00000567377 Q9HAA7 133 aa12.17□□□□□ -0.46
COMMD4-218ENST00000567377 HSPG2P98160 4391 aa12.16□□□□□ -0.46
COMMD4-218ENST00000567377 PCLOQ9Y6V0 5065 aa12.16□□□□□ -0.46
COMMD4-218ENST00000567377 UBE2D3P61077 147 aa12.16□□□□□ -0.46
COMMD4-218ENST00000567377 UBE2D2P62837 147 aa12.16□□□□□ -0.46
COMMD4-218ENST00000567377 ELOBQ15370 118 aa12.16□□□□□ -0.46
COMMD4-218ENST00000567377 ZNF56Q15929 161 aa12.16□□□□□ -0.46
COMMD4-218ENST00000567377 KCNIP4Q6PIL6 250 aa12.16□□□□□ -0.46
COMMD4-218ENST00000567377 MAPKAPK5-AS1Q8N8E1 139 aa12.16□□□□□ -0.46
COMMD4-218ENST00000567377 DNAH5Q8TE73 4624 aa12.16□□□□□ -0.46
COMMD4-218ENST00000567377 C19orf71A6NCJ1 209 aa12.15□□□□□ -0.46
COMMD4-218ENST00000567377 LRCOL1A6NCL2 159 aa12.15□□□□□ -0.46
COMMD4-218ENST00000567377 IGLV2-8P01709 118 aa12.15□□□□□ -0.46
COMMD4-218ENST00000567377 BLOC1S1P78537 153 aa12.15□□□□□ -0.46
COMMD4-218ENST00000567377 OR2D3Q8NGH3 330 aa12.15□□□□□ -0.46
COMMD4-218ENST00000567377 RMI2Q96E14 147 aa12.15□□□□□ -0.46
COMMD4-218ENST00000567377 AP1S3Q96PC3 154 aa12.15□□□□□ -0.46
COMMD4-218ENST00000567377 RAB19A4D1S5 217 aa12.14□□□□□ -0.47
COMMD4-218ENST00000567377 F2Z2F3 143 aa12.14□□□□□ -0.47
COMMD4-218ENST00000567377 P01737 135 aa12.14□□□□□ -0.47
COMMD4-218ENST00000567377 CACNG7P62955 275 aa12.14□□□□□ -0.47
COMMD4-218ENST00000567377 TMEM97Q5BJF2 176 aa12.14□□□□□ -0.47
COMMD4-218ENST00000567377 NIT1Q86X76 327 aa12.14□□□□□ -0.47
COMMD4-218ENST00000567377 Q8N1X5 172 aa12.14□□□□□ -0.47
COMMD4-218ENST00000567377 C9orf62Q8N4C0 152 aa12.14□□□□□ -0.47
COMMD4-218ENST00000567377 FER1L6-AS1Q8NA97 138 aa12.14□□□□□ -0.47
COMMD4-218ENST00000567377 A0A087WX48 190 aa12.13□□□□□ -0.47
COMMD4-218ENST00000567377 F5H697 171 aa12.13□□□□□ -0.47
COMMD4-218ENST00000567377 IGLC6P0CF74 106 aa12.13□□□□□ -0.47
COMMD4-218ENST00000567377 PKIAP61925 76 aa12.13□□□□□ -0.47
COMMD4-218ENST00000567377 GCSHP23434 173 aa12.12□□□□□ -0.47
COMMD4-218ENST00000567377 DAZ4Q86SG3 579 aaKnown RBP12.12□□□□□ -0.47
COMMD4-218ENST00000567377 NEXN-AS1Q8NBZ9 246 aa12.12□□□□□ -0.47
COMMD4-218ENST00000567377 DAZ3Q9NR90 486 aaKnown RBP12.12□□□□□ -0.47
COMMD4-218ENST00000567377 TRBV6-8A0A0A6YYG3 113 aa12.11□□□□□ -0.47
COMMD4-218ENST00000567377 H7C1H1 209 aa12.11□□□□□ -0.47
COMMD4-218ENST00000567377 WDR73Q6P4I2 378 aa12.11□□□□□ -0.47
COMMD4-218ENST00000567377 KIF25-AS1Q9Y6Z4 181 aa12.11□□□□□ -0.47
COMMD4-218ENST00000567377 TRBV20OR9-2A0A075B6H5 130 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms