RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 OR10J3Q5JRS4 329 aa9.46□□□□□ -0.9
SMPD3-204ENST00000563396 ZFP82Q8N141 532 aa9.46□□□□□ -0.9
SMPD3-204ENST00000563396 SFRP2Q96HF1 295 aa9.46□□□□□ -0.9
SMPD3-204ENST00000563396 PHLDA3Q9Y5J5 127 aa9.46□□□□□ -0.9
SMPD3-204ENST00000563396 EIF5AL1Q6IS14 154 aaKnown RBP9.45□□□□□ -0.9
SMPD3-204ENST00000563396 C14orf178Q8N769 122 aaPredicted RBP9.45□□□□□ -0.9
SMPD3-204ENST00000563396 PGPEP1Q9NXJ5 209 aa9.45□□□□□ -0.9
SMPD3-204ENST00000563396 TMSB15BA0A087X1C1 80 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 M0R381 172 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 SNAI2O43623 268 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 SULT1A2P50226 295 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 GAGE1Q13065 139 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 GAGE4Q13068 117 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 GAGE5Q13069 117 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 GAGE13Q4V321 117 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 BAGE2Q86Y30 109 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 KRTAP4-5Q9BYR2 181 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 Q9UF83 564 aa9.44□□□□□ -0.9
SMPD3-204ENST00000563396 A0A087WWC5 75 aa9.43□□□□□ -0.9
SMPD3-204ENST00000563396 TRBV10-1A0A0K0K1A3 114 aa9.43□□□□□ -0.9
SMPD3-204ENST00000563396 C1QBP02746 253 aa9.43□□□□□ -0.9
SMPD3-204ENST00000563396 OR5AL1P0C617 328 aa9.43□□□□□ -0.9
SMPD3-204ENST00000563396 RPL35P42766 123 aaKnown RBP9.43□□□□□ -0.9
SMPD3-204ENST00000563396 CCL20P78556 96 aa9.43□□□□□ -0.9
SMPD3-204ENST00000563396 RPL19P84098 196 aaKnown RBP9.43□□□□□ -0.9
SMPD3-204ENST00000563396 FAM74A4Q5TZK3 123 aa9.43□□□□□ -0.9
SMPD3-204ENST00000563396 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
SMPD3-204ENST00000563396 GNG13Q9P2W3 67 aa9.43□□□□□ -0.9
SMPD3-204ENST00000563396 A0A087WWL8 130 aa9.42□□□□□ -0.9
SMPD3-204ENST00000563396 Q6ZNX1 250 aa9.42□□□□□ -0.9
SMPD3-204ENST00000563396 MAPKAPK5-AS1Q8N8E1 139 aa9.42□□□□□ -0.9
SMPD3-204ENST00000563396 SMIM12Q96EX1 92 aa9.42□□□□□ -0.9
SMPD3-204ENST00000563396 DERL1Q9BUN8 251 aa9.42□□□□□ -0.9
SMPD3-204ENST00000563396 LRCOL1A6NCL2 159 aa9.41□□□□□ -0.9
SMPD3-204ENST00000563396 TEX46H3BTG2 121 aa9.41□□□□□ -0.9
SMPD3-204ENST00000563396 SLC51BQ86UW2 128 aa9.41□□□□□ -0.9
SMPD3-204ENST00000563396 Q8N1X5 172 aa9.41□□□□□ -0.9
SMPD3-204ENST00000563396 OR10AG1Q8NH19 301 aa9.41□□□□□ -0.9
SMPD3-204ENST00000563396 IGLV2-8P01709 118 aa9.4□□□□□ -0.9
SMPD3-204ENST00000563396 IGHV3-30P01768 117 aa9.4□□□□□ -0.9
SMPD3-204ENST00000563396 IGHV3-33P01772 117 aa9.4□□□□□ -0.9
SMPD3-204ENST00000563396 IGHV3-30-3P0DP02 117 aa9.4□□□□□ -0.9
SMPD3-204ENST00000563396 IGHV3-30-5P0DP03 117 aa9.4□□□□□ -0.9
SMPD3-204ENST00000563396 MEF2BQ02080 365 aaPredicted RBP9.4□□□□□ -0.9
SMPD3-204ENST00000563396 CENPWQ5EE01 88 aa9.4□□□□□ -0.9
SMPD3-204ENST00000563396 PRR27Q6MZM9 219 aa9.4□□□□□ -0.9
SMPD3-204ENST00000563396 Q8N3U1 123 aa9.4□□□□□ -0.9
SMPD3-204ENST00000563396 OR10G8Q8NGN5 311 aa9.4□□□□□ -0.9
SMPD3-204ENST00000563396 PDE6DO43924 150 aa9.39□□□□□ -0.91
SMPD3-204ENST00000563396 UBE2D3P61077 147 aa9.39□□□□□ -0.91
SMPD3-204ENST00000563396 UBE2D2P62837 147 aa9.39□□□□□ -0.91
SMPD3-204ENST00000563396 NTN5Q8WTR8 489 aaPredicted RBP9.39□□□□□ -0.91
SMPD3-204ENST00000563396 TRBV7-3A0A075B6L6 115 aa9.38□□□□□ -0.91
SMPD3-204ENST00000563396 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
SMPD3-204ENST00000563396 PSCAO43653 123 aa9.38□□□□□ -0.91
SMPD3-204ENST00000563396 BCL2P10415 239 aa9.38□□□□□ -0.91
SMPD3-204ENST00000563396 FUSP35637 526 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMPD3-204ENST00000563396 RAB4BP61018 213 aa9.38□□□□□ -0.91
SMPD3-204ENST00000563396 RPL36AP83881 106 aaKnown RBP9.38□□□□□ -0.91
SMPD3-204ENST00000563396 RPL36ALQ969Q0 106 aaKnown RBP9.38□□□□□ -0.91
SMPD3-204ENST00000563396 CHCHD7Q9BUK0 85 aa9.38□□□□□ -0.91
SMPD3-204ENST00000563396 Q9HAA7 133 aa9.38□□□□□ -0.91
SMPD3-204ENST00000563396 TRBV20OR9-2A0A075B6H5 130 aa9.37□□□□□ -0.91
SMPD3-204ENST00000563396 IFNA1P01562 189 aa9.37□□□□□ -0.91
SMPD3-204ENST00000563396 IGLC6P0CF74 106 aa9.37□□□□□ -0.91
SMPD3-204ENST00000563396 TOR2AQ5JU69 321 aa9.37□□□□□ -0.91
SMPD3-204ENST00000563396 NIT1Q86X76 327 aa9.37□□□□□ -0.91
SMPD3-204ENST00000563396 C9orf62Q8N4C0 152 aa9.37□□□□□ -0.91
SMPD3-204ENST00000563396 Q8N814 137 aa9.37□□□□□ -0.91
SMPD3-204ENST00000563396 AP1S3Q96PC3 154 aa9.37□□□□□ -0.91
SMPD3-204ENST00000563396 TRAV8-3A0A0A6YYJ7 113 aa9.36□□□□□ -0.91
SMPD3-204ENST00000563396 TAGLN2P37802 199 aaKnown RBP9.36□□□□□ -0.91
SMPD3-204ENST00000563396 GNG4P50150 75 aa9.36□□□□□ -0.91
SMPD3-204ENST00000563396 KRTAP10-1P60331 282 aa9.36□□□□□ -0.91
SMPD3-204ENST00000563396 ZNF56Q15929 161 aa9.36□□□□□ -0.91
SMPD3-204ENST00000563396 SPANXN1Q5VSR9 72 aa9.36□□□□□ -0.91
SMPD3-204ENST00000563396 DAZ4Q86SG3 579 aaKnown RBP9.36□□□□□ -0.91
SMPD3-204ENST00000563396 AKAP14Q86UN6 197 aa9.36□□□□□ -0.91
SMPD3-204ENST00000563396 NEXN-AS1Q8NBZ9 246 aa9.36□□□□□ -0.91
SMPD3-204ENST00000563396 TM2D2Q9BX73 214 aa9.36□□□□□ -0.91
SMPD3-204ENST00000563396 DAZ3Q9NR90 486 aaKnown RBP9.36□□□□□ -0.91
SMPD3-204ENST00000563396 KIF25-AS1Q9Y6Z4 181 aa9.36□□□□□ -0.91
SMPD3-204ENST00000563396 XGP55808 180 aa9.35□□□□□ -0.91
SMPD3-204ENST00000563396 VAX2Q9UIW0 290 aa9.35□□□□□ -0.91
SMPD3-204ENST00000563396 GCSHP23434 173 aa9.34□□□□□ -0.91
SMPD3-204ENST00000563396 RPS20P60866 119 aaKnown RBP9.34□□□□□ -0.91
SMPD3-204ENST00000563396 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
SMPD3-204ENST00000563396 TRBV6-8A0A0A6YYG3 113 aa9.33□□□□□ -0.92
SMPD3-204ENST00000563396 WFDC2Q14508 124 aa9.33□□□□□ -0.92
SMPD3-204ENST00000563396 ATRAIDQ6UW56 229 aa9.33□□□□□ -0.92
SMPD3-204ENST00000563396 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
SMPD3-204ENST00000563396 COX11Q9Y6N1 276 aa9.33□□□□□ -0.92
SMPD3-204ENST00000563396 URGCP-MRPS24S4R325 110 aa9.33□□□□□ -0.92
SMPD3-204ENST00000563396 MUC21A0A0G2JKD1 596 aa9.32□□□□□ -0.92
SMPD3-204ENST00000563396 MUC21A0A140T8X8 626 aa9.32□□□□□ -0.92
SMPD3-204ENST00000563396 RAB19A4D1S5 217 aa9.32□□□□□ -0.92
SMPD3-204ENST00000563396 GZMBP10144 247 aa9.32□□□□□ -0.92
SMPD3-204ENST00000563396 OR2D3Q8NGH3 330 aa9.32□□□□□ -0.92
SMPD3-204ENST00000563396 TMEM70Q9BUB7 260 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms