RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 MRAP2Q96G30 205 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 RNF185Q96GF1 192 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 OVOL2Q9BRP0 275 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 TP53TG1Q9Y2A0 90 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 KIF25-AS1Q9Y6Z4 181 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 U3KQK5 164 aa6.21□□□□□ -1.42
TRAF3-209ENST00000560463 CIDEAO60543 219 aa6.2□□□□□ -1.42
TRAF3-209ENST00000560463 PPP1R17O96001 155 aa6.2□□□□□ -1.42
TRAF3-209ENST00000560463 DEFB135Q30KP9 77 aa6.2□□□□□ -1.42
TRAF3-209ENST00000560463 COA6Q5JTJ3 125 aaKnown RBP6.2□□□□□ -1.42
TRAF3-209ENST00000560463 C14orf178Q8N769 122 aaPredicted RBP6.2□□□□□ -1.42
TRAF3-209ENST00000560463 X6R8D5 127 aa6.2□□□□□ -1.42
TRAF3-209ENST00000560463 PLAC8L1A1L4L8 177 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 C5orf52A6NGY3 159 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 D6R8Y8 96 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 RHODO00212 210 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 CRYGDP07320 174 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 NDUFA6P56556 154 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 LINC00315P59091 139 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 ZFP2Q6ZN57 461 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 OR11H2Q8NH07 326 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 C18orf32Q8TCD1 76 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 PRELID3AQ96N28 172 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 EDA2RQ9HAV5 297 aa6.19□□□□□ -1.42
TRAF3-209ENST00000560463 TRGV1A0A0A0MS02 117 aa6.18□□□□□ -1.42
TRAF3-209ENST00000560463 LYRM9A8MSI8 78 aa6.18□□□□□ -1.42
TRAF3-209ENST00000560463 PRSS47A8MTI9 375 aa6.18□□□□□ -1.42
TRAF3-209ENST00000560463 H7C1H1 209 aa6.18□□□□□ -1.42
TRAF3-209ENST00000560463 RS1O15537 224 aa6.18□□□□□ -1.42
TRAF3-209ENST00000560463 MGPP08493 103 aa6.18□□□□□ -1.42
TRAF3-209ENST00000560463 CFAP126Q5VTH2 177 aa6.18□□□□□ -1.42
TRAF3-209ENST00000560463 BAGE3Q86Y29 109 aa6.18□□□□□ -1.42
TRAF3-209ENST00000560463 JPT2Q9H910 190 aa6.18□□□□□ -1.42
TRAF3-209ENST00000560463 NOP10Q9NPE3 64 aaKnown RBP6.18□□□□□ -1.42
TRAF3-209ENST00000560463 A0A087WWL8 130 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 TRAV4A0A0B4J268 109 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 F5H697 171 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 ESDP10768 282 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 HOXA5P20719 270 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 SNRPEP62304 92 aaKnown RBP6.17□□□□□ -1.42
TRAF3-209ENST00000560463 ZNF56Q15929 161 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 FAM74A4Q5TZK3 123 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 UFSP1Q6NVU6 142 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 Q6ZTI0 123 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 OR4C5Q8NGB2 326 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 C18orf15Q96N68 181 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 MAP1LC3AQ9H492 121 aa6.17□□□□□ -1.42
TRAF3-209ENST00000560463 MRPL16Q9NX20 251 aaKnown RBP6.17□□□□□ -1.42
TRAF3-209ENST00000560463 TEX48A0A1B0GUV7 120 aa6.16□□□□□ -1.42
TRAF3-209ENST00000560463 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
TRAF3-209ENST00000560463 K7EIL1 84 aa6.16□□□□□ -1.42
TRAF3-209ENST00000560463 TNFRSF6BO95407 300 aa6.16□□□□□ -1.42
TRAF3-209ENST00000560463 LINC00612Q8N6U2 182 aa6.16□□□□□ -1.42
TRAF3-209ENST00000560463 Q8NAQ8 132 aa6.16□□□□□ -1.42
TRAF3-209ENST00000560463 CHCHD1Q96BP2 118 aaKnown RBP6.16□□□□□ -1.42
TRAF3-209ENST00000560463 C20orf78Q9BR46 151 aa6.16□□□□□ -1.42
TRAF3-209ENST00000560463 SAMD10Q9BYL1 202 aa6.16□□□□□ -1.42
TRAF3-209ENST00000560463 NXT2Q9NPJ8 142 aaKnown RBP6.16□□□□□ -1.42
TRAF3-209ENST00000560463 TRGV2A0A075B6R0 118 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 TRAV26-2A0A0B4J265 109 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 IGHV4-28A0A0C4DH34 117 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 TRBV6-5A0A0K0K1A5 114 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 K7EMI3 77 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 NCR2O95944 276 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 NPYP01303 97 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 IGHV3-53P01767 116 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 LINC00614P0C842 121 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 RPL32P62910 135 aaKnown RBP6.15□□□□□ -1.42
TRAF3-209ENST00000560463 DEFB121Q5J5C9 76 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 SUMO4Q6EEV6 95 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 NIT1Q86X76 327 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 NRACQ8N912 160 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 PRSS3P2Q8NHM4 247 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 NIT2Q9NQR4 276 aa6.15□□□□□ -1.42
TRAF3-209ENST00000560463 TENM3Q9P273 2699 aa6.15□□□□□ -1.43
TRAF3-209ENST00000560463 GAGE12BA1L429 117 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 M0QY20 66 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 SERF1AO75920 110 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 GAGE7O76087 117 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 GAGE12FP0CL80 117 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 GAGE12GP0CL81 117 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 GAGE12IP0CL82 117 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 SPART-AS1P0CW21 52 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 PMCHP20382 165 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 S100A2P29034 98 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 EMP1P54849 157 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 SUMO2P61956 95 aaKnown RBP6.14□□□□□ -1.43
TRAF3-209ENST00000560463 IQCJQ1A5X6 159 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 HIST3H2BBQ8N257 126 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 DNAJC30Q96LL9 226 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 PACRGQ96M98 296 aaPredicted RBP6.14□□□□□ -1.43
TRAF3-209ENST00000560463 SPATA25Q9BR10 227 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 C11orf68Q9H3H3 251 aaKnown RBP6.14□□□□□ -1.43
TRAF3-209ENST00000560463 ST20Q9HBF5 79 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 DKK2Q9UBU2 259 aa6.14□□□□□ -1.43
TRAF3-209ENST00000560463 TRBV10-1A0A0K0K1A3 114 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 LINC01546A6NGU7 62 aa6.13□□□□□ -1.43
TRAF3-209ENST00000560463 TCAPO15273 167 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms