RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 KDM6BO15054 1643 aa1.48□□□□□ -2.17
SPG11-218ENST00000559754 NWD2Q9ULI1 1742 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 MYH8P13535 1937 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 IGKV3-7A0A075B6H7 116 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 PIGBOS1A0A0B4J2F0 54 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 CATR1Q13166 79 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 GTF2H5Q6ZYL4 71 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 ZGRF1Q86YA3 2104 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 LINC00526Q96FQ7 95 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 WFDC10AQ9H1F0 79 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 MRPL36Q9P0J6 103 aaKnown RBP1.47□□□□□ -2.17
SPG11-218ENST00000559754 CDK12Q9NYV4 1490 aaPredicted RBP1.47□□□□□ -2.17
SPG11-218ENST00000559754 PARP14Q460N5 1801 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 PATJQ8NI35 1801 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 AKAP12Q02952 1782 aa1.47□□□□□ -2.17
SPG11-218ENST00000559754 RBBP6Q7Z6E9 1792 aaKnown RBP1.47□□□□□ -2.17
SPG11-218ENST00000559754 ROBO1Q9Y6N7 1651 aa1.46□□□□□ -2.18
SPG11-218ENST00000559754 TRBV6-7A0A0A0MS04 114 aa1.46□□□□□ -2.18
SPG11-218ENST00000559754 CBLN1P23435 193 aa1.46□□□□□ -2.18
SPG11-218ENST00000559754 SPATA45Q537H7 98 aa1.46□□□□□ -2.18
SPG11-218ENST00000559754 C9orf116Q5BN46 136 aaPredicted RBP1.46□□□□□ -2.18
SPG11-218ENST00000559754 C9orf153Q5TBE3 101 aa1.46□□□□□ -2.18
SPG11-218ENST00000559754 C8orf59Q8N0T1 100 aaPredicted RBP1.46□□□□□ -2.18
SPG11-218ENST00000559754 ACBD7Q8N6N7 88 aa1.46□□□□□ -2.18
SPG11-218ENST00000559754 MRPL57Q9BQC6 102 aaKnown RBP1.46□□□□□ -2.18
SPG11-218ENST00000559754 MRPL35Q9NZE8 188 aaKnown RBP1.46□□□□□ -2.18
SPG11-218ENST00000559754 CNTLNQ9NXG0 1405 aa1.46□□□□□ -2.18
SPG11-218ENST00000559754 PEAK1Q9H792 1746 aa1.46□□□□□ -2.18
SPG11-218ENST00000559754 PLXNA1Q9UIW2 1896 aa1.46□□□□□ -2.18
SPG11-218ENST00000559754 AFDNP55196 1824 aaKnown RBP1.45□□□□□ -2.18
SPG11-218ENST00000559754 DLG5Q8TDM6 1919 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 TMEM218A2RU14 115 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 A6NIN4 97 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 HIGD1CA8MV81 97 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 PRB4P10163 310 aaPredicted RBP1.45□□□□□ -2.18
SPG11-218ENST00000559754 IL9P15248 144 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 KRTAP12-1P59990 96 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 NPC2P61916 151 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 HSD52Q0P140 79 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 IQCJQ1A5X6 159 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 RPL7L1Q6DKI1 246 aaKnown RBP1.45□□□□□ -2.18
SPG11-218ENST00000559754 Q8N8P6 123 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 TSKUQ8WUA8 353 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 SPHKAPQ2M3C7 1700 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 RREB1Q92766 1687 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 UBR4Q5T4S7 5183 aa1.45□□□□□ -2.18
SPG11-218ENST00000559754 IFT140Q96RY7 1462 aa1.44□□□□□ -2.18
SPG11-218ENST00000559754 TRAV23DV6A0A075B6W5 121 aa1.44□□□□□ -2.18
SPG11-218ENST00000559754 TRAV30A0A087WSZ9 112 aa1.44□□□□□ -2.18
SPG11-218ENST00000559754 IGKV2-40A0A087WW87 121 aaPredicted RBP1.44□□□□□ -2.18
SPG11-218ENST00000559754 IFNA17P01571 189 aa1.44□□□□□ -2.18
SPG11-218ENST00000559754 IGKV2D-40P01614 121 aaPredicted RBP1.44□□□□□ -2.18
SPG11-218ENST00000559754 DEFB132Q7Z7B7 95 aa1.44□□□□□ -2.18
SPG11-218ENST00000559754 SVBPQ8N300 66 aa1.44□□□□□ -2.18
SPG11-218ENST00000559754 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
SPG11-218ENST00000559754 SCRIBQ14160 1630 aa1.44□□□□□ -2.18
SPG11-218ENST00000559754 DOCK1Q14185 1865 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 E9PCH4 1651 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 TCHHQ07283 1943 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 TCRBV3S1A0A5B6 114 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 OOSP1A8MZH6 123 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 CCKP06307 115 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 IFITM1P13164 125 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 RPL37AP61513 92 aaKnown RBP1.43□□□□□ -2.18
SPG11-218ENST00000559754 UBE2G1P62253 170 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 C10orf105Q8TEF2 133 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 IFI27L1Q96BM0 104 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 OBSCN-AS1Q96MR7 158 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 COL6A3P12111 3177 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 NRXN2Q9P2S2 1712 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 DOCK2Q92608 1830 aa1.43□□□□□ -2.18
SPG11-218ENST00000559754 TET1Q8NFU7 2136 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 SHROOM2Q13796 1616 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 TRAV12-3A0A0B4J271 114 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 TRBV10-3A0A0K0K1G6 114 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 TEX49A0A1B0GTD5 131 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 S100A7L2Q5SY68 101 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 SBSPONQ8IVN8 264 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 C4orf33Q8N1A6 199 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 AQP10Q96PS8 301 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 AMELYQ99218 206 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 ABCA3Q99758 1704 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 TNS1Q9HBL0 1735 aaKnown RBP1.42□□□□□ -2.18
SPG11-218ENST00000559754 ANKRD26Q9UPS8 1709 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 PHIPQ8WWQ0 1821 aa1.42□□□□□ -2.18
SPG11-218ENST00000559754 CPSF1Q10570 1443 aaKnown RBP1.41□□□□□ -2.18
SPG11-218ENST00000559754 FAM24AA6NFZ4 105 aa1.41□□□□□ -2.18
SPG11-218ENST00000559754 SNRNP200O75643 2136 aaKnown RBP1.41□□□□□ -2.18
SPG11-218ENST00000559754 TFF1P04155 84 aa1.41□□□□□ -2.18
SPG11-218ENST00000559754 SPINK8P0C7L1 97 aa1.41□□□□□ -2.18
SPG11-218ENST00000559754 INSL4Q14641 139 aa1.41□□□□□ -2.18
SPG11-218ENST00000559754 C5orf38Q86SI9 138 aa1.41□□□□□ -2.18
SPG11-218ENST00000559754 DSCR8Q96T75 97 aa1.41□□□□□ -2.18
SPG11-218ENST00000559754 PRRC2BQ5JSZ5 2229 aaKnown RBP1.41□□□□□ -2.18
SPG11-218ENST00000559754 BLMP54132 1417 aaPredicted RBP1.4□□□□□ -2.18
SPG11-218ENST00000559754 CC2D2AQ9P2K1 1620 aa1.4□□□□□ -2.18
SPG11-218ENST00000559754 ARAP2Q8WZ64 1704 aa1.4□□□□□ -2.18
SPG11-218ENST00000559754 TTC37Q6PGP7 1564 aa1.4□□□□□ -2.19
SPG11-218ENST00000559754 M0R143 59 aa1.4□□□□□ -2.19
SPG11-218ENST00000559754 ATP5EP56381 51 aaPredicted RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms