RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 ARID1AO14497 2285 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 TRAV27A0A087WT01 109 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 C20orf202A1L168 122 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 A8MWV9 139 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 H7C2G1 150 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 GNRH2O43555 120 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 HBDP02042 147 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 CLPSP04118 112 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 APODP05090 189 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 S100A8P05109 93 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 QRFPP83859 136 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 PLGLB1Q02325 96 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 Q6ZS52 159 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 TCTEX1D1Q8N7M0 179 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 ZNF436-AS1Q8NC38 126 aaPredicted RBP2□□□□□ -2.09
LRRC28-212ENST00000558911 OR5D14Q8NGL3 314 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 MRPS24Q96EL2 167 aaKnown RBP2□□□□□ -2.09
LRRC28-212ENST00000558911 PSMG3Q9BT73 122 aaPredicted RBP2□□□□□ -2.09
LRRC28-212ENST00000558911 DUSP21Q9H596 190 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 BCL2L10Q9HD36 194 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 COMMD3Q9UBI1 195 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 FAM215AQ9Y5M1 114 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 PRXQ9BXM0 1461 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 USH2AO75445 5202 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 CRYBG1Q9Y4K1 1723 aa2□□□□□ -2.09
LRRC28-212ENST00000558911 MYH1P12882 1939 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 MALRD1Q5VYJ5 2156 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 SIP14410 1827 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 NACAE9PAV3 2078 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 TRAV3A0A0B4J244 114 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 A0A0D9SG52 128 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 A0A0G2JMM0 328 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 TRBV10-2A0A0K0K1G8 114 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 A0A1W2PPB8 328 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 BBIP1A8MTZ0 92 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 KIR3DP1A8MWS1 328 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 CORTO00230 105 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 UQCRQO14949 82 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 SNAPC5O75971 98 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 TRGC1P0CF51 173 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 COX6A1P12074 109 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 ZNF14P17017 642 aaPredicted RBP1.99□□□□□ -2.09
LRRC28-212ENST00000558911 FGF7P21781 194 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 AQP4P55087 323 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 EBI3Q14213 229 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 CDK5R1Q15078 307 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 TMEM155Q4W5P6 130 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 Q6P435 159 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 LCN15Q6UWW0 184 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 C3orf62Q6ZUJ4 267 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 FAM216BQ8N7L0 139 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 OR10AC1Q8NH08 325 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 DIRC1Q969H9 104 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 PPP3R2Q96LZ3 170 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 RETNLBQ9BQ08 111 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 SCRT1Q9BWW7 348 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 TMEM191AQ9H0A3 160 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 CST9LQ9H4G1 147 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 SCN3BQ9NY72 215 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 FKBP11Q9NYL4 201 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 HHLA3Q9XRX5 114 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 POLEQ07864 2286 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 COL4A2P08572 1712 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 VPS8Q8N3P4 1428 aa1.99□□□□□ -2.09
LRRC28-212ENST00000558911 IGKV1D-42A0A075B6H8 117 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 IGLV3-16A0A075B6K0 115 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 A0A0J9YX75 114 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 RPL36A-HNRNPH2H7BZ11 118 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 HLA-DRB4P13762 266 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 FABP4P15090 132 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 IGFL3Q6UXB1 125 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 IZUMO2Q6UXV1 221 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 TMEM91Q6ZNR0 172 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 RPS19BP1Q86WX3 136 aaKnown RBP1.98□□□□□ -2.09
LRRC28-212ENST00000558911 SNX29P2Q8IUI4 249 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 RNF182Q8N6D2 247 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 CHCHD1Q96BP2 118 aaKnown RBP1.98□□□□□ -2.09
LRRC28-212ENST00000558911 MCEEQ96PE7 176 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 SDF2Q99470 211 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 HLA-DRB4X5D2U9 266 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 DYNC1H1Q14204 4646 aaKnown RBP1.98□□□□□ -2.09
LRRC28-212ENST00000558911 TANC2Q9HCD6 1990 aa1.98□□□□□ -2.09
LRRC28-212ENST00000558911 ARHGAP32A7KAX9 2087 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
LRRC28-212ENST00000558911 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.97□□□□□ -2.09
LRRC28-212ENST00000558911 IGHV1-18A0A0C4DH31 117 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 COLCA2A8K830 154 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 ZNF705BP0CI00 300 aaPredicted RBP1.97□□□□□ -2.09
LRRC28-212ENST00000558911 AKAIN1P0CW23 69 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 TPT1P13693 172 aaKnown RBP1.97□□□□□ -2.09
LRRC28-212ENST00000558911 FUSP35637 526 aaKnown RBP eCLIP1.97□□□□□ -2.09
LRRC28-212ENST00000558911 GNG4P50150 75 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 FXYD2P54710 66 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 PPP3R1P63098 170 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 EIF4EBP1Q13541 118 aaPredicted RBP1.97□□□□□ -2.09
LRRC28-212ENST00000558911 NNATQ16517 81 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 PABPC1L2AQ5JQF8 200 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 MEIG1Q5JSS6 88 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 CLLU1Q5K131 121 aa1.97□□□□□ -2.09
LRRC28-212ENST00000558911 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms