RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 CTRLP40313 264 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 FAM222AQ5U5X8 452 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 RASL10AQ92737 203 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 PTH2Q96A98 100 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 C16orf74Q96GX8 76 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 KCNS1Q96KK3 526 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 C18orf15Q96N68 181 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 TMEM208Q9BTX3 173 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 MSRB1Q9NZV6 116 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 KIF25-AS1Q9Y6Z4 181 aa5.1□□□□□ -1.59
TRAF3-206ENST00000558880 MUC4Q99102 2169 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 MUC21A0A0G2JKD1 596 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 MUC21A0A140T8X8 626 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 PRSS29PA6NIE9 313 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 GATCO43716 136 aaKnown RBP5.09□□□□□ -1.59
TRAF3-206ENST00000558880 EMP1P54849 157 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 NANOS2P60321 138 aaKnown RBP5.09□□□□□ -1.59
TRAF3-206ENST00000558880 ERVFC1-1P60608 527 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 PNRC1Q12796 327 aaPredicted RBP5.09□□□□□ -1.59
TRAF3-206ENST00000558880 NDUFA5Q16718 116 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 NUP35Q8NFH5 326 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 OR10G8Q8NGN5 311 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 TSKUQ8WUA8 353 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 YPEL4Q96NS1 127 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 SAMD10Q9BYL1 202 aa5.09□□□□□ -1.59
TRAF3-206ENST00000558880 MRPL16Q9NX20 251 aaKnown RBP5.09□□□□□ -1.59
TRAF3-206ENST00000558880 HERC2O95714 4834 aa5.09□□□□□ -1.6
TRAF3-206ENST00000558880 DNAH2Q9P225 4427 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 C7orf77A4D0Y5 90 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 LYRM9A8MSI8 78 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 M0R2P5 195 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 RS1O15537 224 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 CRYGDP07320 174 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 ASIPP42127 132 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 ZNF415Q09FC8 603 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 LGALS9BQ3B8N2 356 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 LYZL1Q6UWQ5 148 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 Q6ZTC4 211 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 FER1L6-AS1Q8NA97 138 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 BIN3Q9NQY0 253 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 Q9UF83 564 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 TIMM8BQ9Y5J9 83 aaPredicted RBP5.08□□□□□ -1.6
TRAF3-206ENST00000558880 ALMS1Q8TCU4 4167 aa5.08□□□□□ -1.6
TRAF3-206ENST00000558880 A0A1B0GXF2 115 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 FAM231BA6NCW3 169 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 HIGD1CA8MV81 97 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 GAGE7O76087 117 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 APOC3P02656 99 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 GAGE12FP0CL80 117 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 GAGE12GP0CL81 117 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 GAGE12IP0CL82 117 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 RPS20P60866 119 aaKnown RBP5.07□□□□□ -1.6
TRAF3-206ENST00000558880 PIK3CD-AS1Q5SR53 167 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 CFAP126Q5VTH2 177 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 ZNF479Q96JC4 524 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 SPXQ9BT56 116 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 GFRA4Q9GZZ7 299 aa5.07□□□□□ -1.6
TRAF3-206ENST00000558880 KMT2AQ03164 3969 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 DNAH6Q9C0G6 4158 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 A0A087WWC5 75 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 TRGV1A0A0A0MS02 117 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 A8MWL6 223 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 SPART-AS1P0CW21 52 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 NTF3P20783 257 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 FAM3BP58499 235 aaPredicted RBP5.06□□□□□ -1.6
TRAF3-206ENST00000558880 ZNF876PQ49A33 203 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 WDR73Q6P4I2 378 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 GATD1Q8NB37 220 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 C11orf45Q8TAV5 145 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 DAZAP1Q96EP5 407 aaKnown RBP5.06□□□□□ -1.6
TRAF3-206ENST00000558880 VSIG2Q96IQ7 327 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 PGLYRP4Q96LB8 373 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 TMEM242Q9NWH2 141 aa5.06□□□□□ -1.6
TRAF3-206ENST00000558880 A0A1W2PPQ1 181 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 CXorf65A6NEN9 183 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 SNURFLB1AK76 121 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 M0R381 172 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 GAS8-AS1O95177 125 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 DEFB130BP0DP73 79 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 DEFB130AP0DP74 79 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 EVI2AP22794 236 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 C15orf54Q8N8G6 183 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 RNF185Q96GF1 192 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 CTDSP1Q9GZU7 261 aa5.05□□□□□ -1.6
TRAF3-206ENST00000558880 TRAV4A0A0B4J268 109 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 F2Z2F3 143 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 F5H697 171 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 PPP1R2P9O14990 202 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 ATP6V1G1O75348 118 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 SCO1O75880 301 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 IGHV3-53P01767 116 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 MT-ND4LP03901 98 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 LINC00694P0DN24 101 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 S100A4P26447 101 aaKnown RBP5.04□□□□□ -1.6
TRAF3-206ENST00000558880 RHEBQ15382 184 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 SVBPQ8N300 66 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 IMMP2LQ96T52 175 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 NDUFAF3Q9BU61 184 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 NAT8BQ9UHF3 227 aa5.04□□□□□ -1.6
TRAF3-206ENST00000558880 RYR1P21817 5038 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms