RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MRPS16Q9Y3D3 137 aaKnown RBP8.53□□□□□ -1.04
SMAD3-205ENST00000558428 LY96Q9Y6Y9 160 aa8.53□□□□□ -1.04
SMAD3-205ENST00000558428 DNAH2Q9P225 4427 aa8.52□□□□□ -1.05
SMAD3-205ENST00000558428 NXPH4O95158 308 aa8.52□□□□□ -1.05
SMAD3-205ENST00000558428 CRYGDP07320 174 aa8.52□□□□□ -1.05
SMAD3-205ENST00000558428 IGLC6P0CF74 106 aa8.52□□□□□ -1.05
SMAD3-205ENST00000558428 RAB14P61106 215 aa8.52□□□□□ -1.05
SMAD3-205ENST00000558428 SRSF3P84103 164 aaKnown RBP8.52□□□□□ -1.05
SMAD3-205ENST00000558428 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.05
SMAD3-205ENST00000558428 UPK3BQ9BT76 320 aa8.52□□□□□ -1.05
SMAD3-205ENST00000558428 RPP21Q9H633 154 aaKnown RBP8.52□□□□□ -1.05
SMAD3-205ENST00000558428 Q9H8V8 135 aa8.52□□□□□ -1.05
SMAD3-205ENST00000558428 C9JQL5 133 aa8.51□□□□□ -1.05
SMAD3-205ENST00000558428 SH2D6Q7Z4S9 175 aa8.51□□□□□ -1.05
SMAD3-205ENST00000558428 EPPK1P58107 5090 aaKnown RBP8.51□□□□□ -1.05
SMAD3-205ENST00000558428 A0A1W2PPQ1 181 aa8.5□□□□□ -1.05
SMAD3-205ENST00000558428 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
SMAD3-205ENST00000558428 ERVFC1-1P60608 527 aa8.5□□□□□ -1.05
SMAD3-205ENST00000558428 CACNG7P62955 275 aa8.5□□□□□ -1.05
SMAD3-205ENST00000558428 FAM74A3Q4VXF1 159 aa8.5□□□□□ -1.05
SMAD3-205ENST00000558428 LYZL1Q6UWQ5 148 aa8.5□□□□□ -1.05
SMAD3-205ENST00000558428 Q6ZR54 194 aa8.5□□□□□ -1.05
SMAD3-205ENST00000558428 FAM231DQ6ZW35 169 aa8.5□□□□□ -1.05
SMAD3-205ENST00000558428 LINC01551Q86U37 167 aa8.5□□□□□ -1.05
SMAD3-205ENST00000558428 C14orf178Q8N769 122 aaPredicted RBP8.5□□□□□ -1.05
SMAD3-205ENST00000558428 SMDT1Q9H4I9 107 aa8.5□□□□□ -1.05
SMAD3-205ENST00000558428 NBDYA0A0U1RRE5 68 aa8.49□□□□□ -1.05
SMAD3-205ENST00000558428 GAGE12JA6NER3 117 aa8.49□□□□□ -1.05
SMAD3-205ENST00000558428 F2Z2F3 143 aa8.49□□□□□ -1.05
SMAD3-205ENST00000558428 GAGE1Q13065 139 aa8.49□□□□□ -1.05
SMAD3-205ENST00000558428 GAGE4Q13068 117 aa8.49□□□□□ -1.05
SMAD3-205ENST00000558428 GAGE5Q13069 117 aa8.49□□□□□ -1.05
SMAD3-205ENST00000558428 ZNF56Q15929 161 aa8.49□□□□□ -1.05
SMAD3-205ENST00000558428 GAGE13Q4V321 117 aa8.49□□□□□ -1.05
SMAD3-205ENST00000558428 AP1S3Q96PC3 154 aa8.49□□□□□ -1.05
SMAD3-205ENST00000558428 DNAH17Q9UFH2 4485 aa8.48□□□□□ -1.05
SMAD3-205ENST00000558428 SMIM17P0DL12 118 aa8.48□□□□□ -1.05
SMAD3-205ENST00000558428 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
SMAD3-205ENST00000558428 ATP6V0E2Q8NHE4 81 aa8.48□□□□□ -1.05
SMAD3-205ENST00000558428 MSRB1Q9NZV6 116 aa8.48□□□□□ -1.05
SMAD3-205ENST00000558428 A8MWL6 223 aa8.47□□□□□ -1.05
SMAD3-205ENST00000558428 SIVA1O15304 175 aa8.47□□□□□ -1.05
SMAD3-205ENST00000558428 CTRLP40313 264 aa8.47□□□□□ -1.05
SMAD3-205ENST00000558428 RAB4BP61018 213 aa8.47□□□□□ -1.05
SMAD3-205ENST00000558428 IFITM2Q01629 132 aa8.47□□□□□ -1.05
SMAD3-205ENST00000558428 TTC32Q5I0X7 151 aa8.47□□□□□ -1.05
SMAD3-205ENST00000558428 SOHLH1Q5JUK2 328 aa8.47□□□□□ -1.05
SMAD3-205ENST00000558428 Q9UF83 564 aa8.47□□□□□ -1.05
SMAD3-205ENST00000558428 NAT8Q9UHE5 227 aa8.47□□□□□ -1.05
SMAD3-205ENST00000558428 F5H697 171 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 MGPP08493 103 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 TRGC1P0CF51 173 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 LINC00694P0DN24 101 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 NTF3P20783 257 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 TIRAPP58753 221 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 RPL23P62829 140 aaKnown RBP8.46□□□□□ -1.06
SMAD3-205ENST00000558428 ADIRFQ15847 76 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 CT83Q5H943 113 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 CLLU1Q5K131 121 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 WDR73Q6P4I2 378 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 C15orf54Q8N8G6 183 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 ISOC2Q96AB3 205 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 GTSF1LQ9H1H1 148 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 OSTCQ9NRP0 149 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 KIF25-AS1Q9Y6Z4 181 aa8.46□□□□□ -1.06
SMAD3-205ENST00000558428 TRBV10-1A0A0K0K1A3 114 aa8.45□□□□□ -1.06
SMAD3-205ENST00000558428 RPL36AP83881 106 aaKnown RBP8.45□□□□□ -1.06
SMAD3-205ENST00000558428 TWIST1Q15672 202 aa8.45□□□□□ -1.06
SMAD3-205ENST00000558428 C1orf134Q5TEV5 83 aa8.45□□□□□ -1.06
SMAD3-205ENST00000558428 WFDC10BQ8IUB3 73 aa8.45□□□□□ -1.06
SMAD3-205ENST00000558428 RPL36ALQ969Q0 106 aaKnown RBP8.45□□□□□ -1.06
SMAD3-205ENST00000558428 PGLYRP4Q96LB8 373 aa8.45□□□□□ -1.06
SMAD3-205ENST00000558428 CNFNQ9BYD5 112 aa8.45□□□□□ -1.06
SMAD3-205ENST00000558428 BIRC6Q9NR09 4857 aa8.45□□□□□ -1.06
SMAD3-205ENST00000558428 FAT2Q9NYQ8 4349 aa8.45□□□□□ -1.06
SMAD3-205ENST00000558428 EVI2AP22794 236 aa8.44□□□□□ -1.06
SMAD3-205ENST00000558428 LINC00315P59091 139 aa8.44□□□□□ -1.06
SMAD3-205ENST00000558428 OR10J3Q5JRS4 329 aa8.44□□□□□ -1.06
SMAD3-205ENST00000558428 TSKUQ8WUA8 353 aa8.44□□□□□ -1.06
SMAD3-205ENST00000558428 KRTAP1-5Q9BYS1 174 aa8.44□□□□□ -1.06
SMAD3-205ENST00000558428 DPH3P1Q9H4G8 78 aa8.44□□□□□ -1.06
SMAD3-205ENST00000558428 TRBV7-3A0A075B6L6 115 aa8.43□□□□□ -1.06
SMAD3-205ENST00000558428 TRAV8-6A0A0B4J262 113 aa8.43□□□□□ -1.06
SMAD3-205ENST00000558428 RTL8CO15255 209 aa8.43□□□□□ -1.06
SMAD3-205ENST00000558428 LELP1Q5T871 98 aa8.43□□□□□ -1.06
SMAD3-205ENST00000558428 LINC00336Q6ZUF6 198 aa8.43□□□□□ -1.06
SMAD3-205ENST00000558428 C6orf223Q8N319 242 aa8.43□□□□□ -1.06
SMAD3-205ENST00000558428 NEXN-AS1Q8NBZ9 246 aa8.43□□□□□ -1.06
SMAD3-205ENST00000558428 OR10G8Q8NGN5 311 aa8.43□□□□□ -1.06
SMAD3-205ENST00000558428 GFRA4Q9GZZ7 299 aa8.43□□□□□ -1.06
SMAD3-205ENST00000558428 V9GYV3 84 aa8.43□□□□□ -1.06
SMAD3-205ENST00000558428 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
SMAD3-205ENST00000558428 FOXA3P55318 350 aaPredicted RBP8.42□□□□□ -1.06
SMAD3-205ENST00000558428 UBE2D3P61077 147 aa8.42□□□□□ -1.06
SMAD3-205ENST00000558428 UBE2D2P62837 147 aa8.42□□□□□ -1.06
SMAD3-205ENST00000558428 SUMO4Q6EEV6 95 aa8.42□□□□□ -1.06
SMAD3-205ENST00000558428 SMIM15Q7Z3B0 74 aa8.42□□□□□ -1.06
SMAD3-205ENST00000558428 BORCS7Q96B45 105 aa8.42□□□□□ -1.06
SMAD3-205ENST00000558428 HECTD4Q9Y4D8 3996 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms