RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 RPP21Q9H633 154 aaKnown RBP6.21□□□□□ -1.42
SPG11-207ENST00000558138 SCRT2Q9NQ03 307 aa6.21□□□□□ -1.42
SPG11-207ENST00000558138 TRAV8-6A0A0B4J262 113 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 C19orf71A6NCJ1 209 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 GATCO43716 136 aaKnown RBP6.2□□□□□ -1.42
SPG11-207ENST00000558138 OR5AL1P0C617 328 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 CACNG7P62955 275 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 OR10J3Q5JRS4 329 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.2□□□□□ -1.42
SPG11-207ENST00000558138 NUDT10Q8NFP7 164 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 ATP6V0E2Q8NHE4 81 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 OCC1Q8TAD7 63 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 BORCS7Q96B45 105 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 NUDT11Q96G61 164 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 UPK3BQ9BT76 320 aa6.2□□□□□ -1.42
SPG11-207ENST00000558138 HYDINQ4G0P3 5121 aa6.19□□□□□ -1.42
SPG11-207ENST00000558138 TRAV9-2A0A087WT02 112 aa6.19□□□□□ -1.42
SPG11-207ENST00000558138 A0A1W2PPQ1 181 aa6.19□□□□□ -1.42
SPG11-207ENST00000558138 K7EN84 100 aa6.19□□□□□ -1.42
SPG11-207ENST00000558138 SNAI2O43623 268 aa6.19□□□□□ -1.42
SPG11-207ENST00000558138 SRP19P09132 144 aaKnown RBP6.19□□□□□ -1.42
SPG11-207ENST00000558138 RPL36AP83881 106 aaKnown RBP6.19□□□□□ -1.42
SPG11-207ENST00000558138 LINC00336Q6ZUF6 198 aa6.19□□□□□ -1.42
SPG11-207ENST00000558138 SMIM15Q7Z3B0 74 aa6.19□□□□□ -1.42
SPG11-207ENST00000558138 C6orf223Q8N319 242 aa6.19□□□□□ -1.42
SPG11-207ENST00000558138 C14orf178Q8N769 122 aaPredicted RBP6.19□□□□□ -1.42
SPG11-207ENST00000558138 RPL36ALQ969Q0 106 aaKnown RBP6.19□□□□□ -1.42
SPG11-207ENST00000558138 LY96Q9Y6Y9 160 aa6.19□□□□□ -1.42
SPG11-207ENST00000558138 SACSQ9NZJ4 4579 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 PRSS29PA6NIE9 313 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 F2Z2F3 143 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 TRGC1P0CF51 173 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 EVI2AP22794 236 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 TWIST1Q15672 202 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 ADIRFQ15847 76 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 LYZL1Q6UWQ5 148 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 Q6ZSN1 163 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 WFDC10BQ8IUB3 73 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 C15orf54Q8N8G6 183 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 GTSF1LQ9H1H1 148 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 KMT2AQ03164 3969 aa6.18□□□□□ -1.42
SPG11-207ENST00000558138 A8MWL6 223 aa6.17□□□□□ -1.42
SPG11-207ENST00000558138 CRYGDP07320 174 aa6.17□□□□□ -1.42
SPG11-207ENST00000558138 RAB4BP61018 213 aa6.17□□□□□ -1.42
SPG11-207ENST00000558138 TMEM241Q24JQ0 296 aa6.17□□□□□ -1.42
SPG11-207ENST00000558138 FAM74A3Q4VXF1 159 aa6.17□□□□□ -1.42
SPG11-207ENST00000558138 KCNIP4Q6PIL6 250 aa6.17□□□□□ -1.42
SPG11-207ENST00000558138 Q6ZR54 194 aa6.17□□□□□ -1.42
SPG11-207ENST00000558138 SSBP4Q9BWG4 385 aaPredicted RBP6.17□□□□□ -1.42
SPG11-207ENST00000558138 NDUFS6O75380 124 aaKnown RBP6.16□□□□□ -1.42
SPG11-207ENST00000558138 IGLC6P0CF74 106 aa6.16□□□□□ -1.42
SPG11-207ENST00000558138 NTF3P20783 257 aa6.16□□□□□ -1.42
SPG11-207ENST00000558138 LELP1Q5T871 98 aa6.16□□□□□ -1.42
SPG11-207ENST00000558138 UFSP1Q6NVU6 142 aa6.16□□□□□ -1.42
SPG11-207ENST00000558138 FAM231DQ6ZW35 169 aa6.16□□□□□ -1.42
SPG11-207ENST00000558138 LINC01551Q86U37 167 aa6.16□□□□□ -1.42
SPG11-207ENST00000558138 PGLYRP4Q96LB8 373 aa6.16□□□□□ -1.42
SPG11-207ENST00000558138 URGCP-MRPS24S4R325 110 aa6.16□□□□□ -1.42
SPG11-207ENST00000558138 DNAH1Q9P2D7 4330 aa6.16□□□□□ -1.42
SPG11-207ENST00000558138 TRBV7-3A0A075B6L6 115 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 A0A087WWC5 75 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 TRBV10-1A0A0K0K1A3 114 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 H7C1H1 209 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 IGHV3-30P01768 117 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 IGHV3-33P01772 117 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 IGHV3-30-3P0DP02 117 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 IGHV3-30-5P0DP03 117 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 SRSF3P84103 164 aaKnown RBP6.15□□□□□ -1.42
SPG11-207ENST00000558138 ZNF575Q86XF7 245 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 C10orf126Q8N4M7 172 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 DPH3P1Q9H4G8 78 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 SMDT1Q9H4I9 107 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 MSRB1Q9NZV6 116 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 NAT8Q9UHE5 227 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 TNFRSF18Q9Y5U5 241 aa6.15□□□□□ -1.42
SPG11-207ENST00000558138 RTL8CO15255 209 aa6.14□□□□□ -1.43
SPG11-207ENST00000558138 CTRLP40313 264 aa6.14□□□□□ -1.43
SPG11-207ENST00000558138 TIRAPP58753 221 aa6.14□□□□□ -1.43
SPG11-207ENST00000558138 LINC00315P59091 139 aa6.14□□□□□ -1.43
SPG11-207ENST00000558138 RPL23P62829 140 aaKnown RBP6.14□□□□□ -1.43
SPG11-207ENST00000558138 OR10G8Q8NGN5 311 aa6.14□□□□□ -1.43
SPG11-207ENST00000558138 OSTCQ9NRP0 149 aa6.14□□□□□ -1.43
SPG11-207ENST00000558138 HIGD1CA8MV81 97 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 C9JQL5 133 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 PSCAO43653 123 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 DNAH10OSP0CZ25 163 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 CT83Q5H943 113 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 SUMO4Q6EEV6 95 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 WDR73Q6P4I2 378 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 NFE4Q86UQ8 179 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 NEXN-AS1Q8NBZ9 246 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 TSKUQ8WUA8 353 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 GTSF1Q8WW33 167 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 ISOC2Q96AB3 205 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 KRTAP1-5Q9BYS1 174 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 Q9UF83 564 aa6.13□□□□□ -1.43
SPG11-207ENST00000558138 A0A087WX48 190 aa6.12□□□□□ -1.43
SPG11-207ENST00000558138 TMEM262E9PQX1 116 aa6.12□□□□□ -1.43
SPG11-207ENST00000558138 K7EP13 123 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms