RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 Q9UF83 564 aa15.22■□□□□ 0.03
TMEM260-214ENST00000556975 TMSB15BA0A087X1C1 80 aa15.21■□□□□ 0.03
TMEM260-214ENST00000556975 SCO2A0A1W2PP80 73 aa15.21■□□□□ 0.03
TMEM260-214ENST00000556975 Q8N1X5 172 aa15.21■□□□□ 0.03
TMEM260-214ENST00000556975 CXCL1P09341 107 aa15.2■□□□□ 0.02
TMEM260-214ENST00000556975 BAGE2Q86Y30 109 aa15.2■□□□□ 0.02
TMEM260-214ENST00000556975 ZFP82Q8N141 532 aa15.2■□□□□ 0.02
TMEM260-214ENST00000556975 IGHV3-30P01768 117 aa15.19■□□□□ 0.02
TMEM260-214ENST00000556975 IGHV3-33P01772 117 aa15.19■□□□□ 0.02
TMEM260-214ENST00000556975 IGHV3-30-3P0DP02 117 aa15.19■□□□□ 0.02
TMEM260-214ENST00000556975 IGHV3-30-5P0DP03 117 aa15.19■□□□□ 0.02
TMEM260-214ENST00000556975 FUSP35637 526 aaKnown RBP eCLIP15.19■□□□□ 0.02
TMEM260-214ENST00000556975 A0A087WWC5 75 aa15.18■□□□□ 0.02
TMEM260-214ENST00000556975 TRAV1-1A0A0B4J248 108 aa15.18■□□□□ 0.02
TMEM260-214ENST00000556975 LRCOL1A6NCL2 159 aa15.18■□□□□ 0.02
TMEM260-214ENST00000556975 M0R381 172 aa15.18■□□□□ 0.02
TMEM260-214ENST00000556975 RAB5CP51148 216 aa15.18■□□□□ 0.02
TMEM260-214ENST00000556975 LAGE3Q14657 143 aa15.18■□□□□ 0.02
TMEM260-214ENST00000556975 FAM74A4Q5TZK3 123 aa15.18■□□□□ 0.02
TMEM260-214ENST00000556975 A0A087WWL8 130 aa15.17■□□□□ 0.02
TMEM260-214ENST00000556975 PSCAO43653 123 aa15.17■□□□□ 0.02
TMEM260-214ENST00000556975 CCL20P78556 96 aa15.16■□□□□ 0.02
TMEM260-214ENST00000556975 MANBALQ9NQG1 85 aa15.16■□□□□ 0.02
TMEM260-214ENST00000556975 TRBV10-1A0A0K0K1A3 114 aa15.15■□□□□ 0.02
TMEM260-214ENST00000556975 EIF5AL1Q6IS14 154 aaKnown RBP15.15■□□□□ 0.02
TMEM260-214ENST00000556975 SSBP4Q9BWG4 385 aaPredicted RBP15.15■□□□□ 0.02
TMEM260-214ENST00000556975 Q9HAA7 133 aa15.15■□□□□ 0.02
TMEM260-214ENST00000556975 RPL19P84098 196 aaKnown RBP15.14■□□□□ 0.01
TMEM260-214ENST00000556975 TCTE3Q8IZS6 198 aa15.14■□□□□ 0.01
TMEM260-214ENST00000556975 C11orf52Q96A22 123 aa15.14■□□□□ 0.01
TMEM260-214ENST00000556975 SNAI2O43623 268 aa15.13■□□□□ 0.01
TMEM260-214ENST00000556975 RPL35P42766 123 aaKnown RBP15.13■□□□□ 0.01
TMEM260-214ENST00000556975 KRTAP10-1P60331 282 aa15.13■□□□□ 0.01
TMEM260-214ENST00000556975 GNG13Q9P2W3 67 aa15.13■□□□□ 0.01
TMEM260-214ENST00000556975 OR5AL1P0C617 328 aa15.12■□□□□ 0.01
TMEM260-214ENST00000556975 SULT1A2P50226 295 aa15.12■□□□□ 0.01
TMEM260-214ENST00000556975 XGP55808 180 aa15.12■□□□□ 0.01
TMEM260-214ENST00000556975 Q8N3U1 123 aa15.12■□□□□ 0.01
TMEM260-214ENST00000556975 OR10AG1Q8NH19 301 aa15.12■□□□□ 0.01
TMEM260-214ENST00000556975 TM2D2Q9BX73 214 aa15.12■□□□□ 0.01
TMEM260-214ENST00000556975 TEX46H3BTG2 121 aa15.11■□□□□ 0.01
TMEM260-214ENST00000556975 NTN5Q8WTR8 489 aaPredicted RBP15.11■□□□□ 0.01
TMEM260-214ENST00000556975 TRAV8-3A0A0A6YYJ7 113 aa15.1■□□□□ 0.01
TMEM260-214ENST00000556975 GCSHP23434 173 aa15.1■□□□□ 0.01
TMEM260-214ENST00000556975 RAB4BP61018 213 aa15.1■□□□□ 0.01
TMEM260-214ENST00000556975 RPL36AP83881 106 aaKnown RBP15.1■□□□□ 0.01
TMEM260-214ENST00000556975 TOR2AQ5JU69 321 aa15.1■□□□□ 0.01
TMEM260-214ENST00000556975 DAZ4Q86SG3 579 aaKnown RBP15.1■□□□□ 0.01
TMEM260-214ENST00000556975 OR10G8Q8NGN5 311 aa15.1■□□□□ 0.01
TMEM260-214ENST00000556975 RPL36ALQ969Q0 106 aaKnown RBP15.1■□□□□ 0.01
TMEM260-214ENST00000556975 DERL1Q9BUN8 251 aa15.1■□□□□ 0.01
TMEM260-214ENST00000556975 DAZ3Q9NR90 486 aaKnown RBP15.1■□□□□ 0.01
TMEM260-214ENST00000556975 TRBV7-3A0A075B6L6 115 aa15.09■□□□□ 0.01
TMEM260-214ENST00000556975 UBE2D3P61077 147 aa15.09■□□□□ 0.01
TMEM260-214ENST00000556975 UBE2D2P62837 147 aa15.09■□□□□ 0.01
TMEM260-214ENST00000556975 PRR27Q6MZM9 219 aa15.09■□□□□ 0.01
TMEM260-214ENST00000556975 NIT1Q86X76 327 aa15.09■□□□□ 0.01
TMEM260-214ENST00000556975 Q8N814 137 aa15.09■□□□□ 0.01
TMEM260-214ENST00000556975 DMBT1Q9UGM3 2413 aaPredicted RBP15.07■□□□□ 0
TMEM260-214ENST00000556975 HERC1Q15751 4861 aa15.07■□□□□ 0
TMEM260-214ENST00000556975 C1QBP02746 253 aa15.07■□□□□ 0
TMEM260-214ENST00000556975 SPANXN1Q5VSR9 72 aa15.07■□□□□ 0
TMEM260-214ENST00000556975 SLC51BQ86UW2 128 aa15.07■□□□□ 0
TMEM260-214ENST00000556975 SMIM12Q96EX1 92 aa15.07■□□□□ 0
TMEM260-214ENST00000556975 IGLV5-52A0A0A0MRZ9 124 aa15.06■□□□□ 0
TMEM260-214ENST00000556975 IGLV2-8P01709 118 aa15.06■□□□□ 0
TMEM260-214ENST00000556975 CENPWQ5EE01 88 aa15.06■□□□□ 0
TMEM260-214ENST00000556975 CHCHD7Q9BUK0 85 aa15.06■□□□□ 0
TMEM260-214ENST00000556975 URGCP-MRPS24S4R325 110 aa15.06■□□□□ 0
TMEM260-214ENST00000556975 MEF2BQ02080 365 aaPredicted RBP15.05■□□□□ -0
TMEM260-214ENST00000556975 Q6ZNX1 250 aa15.05■□□□□ -0
TMEM260-214ENST00000556975 COX11Q9Y6N1 276 aa15.05■□□□□ -0
TMEM260-214ENST00000556975 PDE6DO43924 150 aa15.04■□□□□ -0
TMEM260-214ENST00000556975 ZNF56Q15929 161 aa15.04■□□□□ -0
TMEM260-214ENST00000556975 NEXN-AS1Q8NBZ9 246 aa15.04■□□□□ -0
TMEM260-214ENST00000556975 KIF25-AS1Q9Y6Z4 181 aa15.04■□□□□ -0
TMEM260-214ENST00000556975 MUC21A0A0G2JKD1 596 aa15.03■□□□□ -0
TMEM260-214ENST00000556975 MUC21A0A140T8X8 626 aa15.03■□□□□ -0
TMEM260-214ENST00000556975 C19orf71A6NCJ1 209 aa15.03■□□□□ -0
TMEM260-214ENST00000556975 IFNA1P01562 189 aa15.03■□□□□ -0
TMEM260-214ENST00000556975 RAB19A4D1S5 217 aa15.02■□□□□ -0
TMEM260-214ENST00000556975 EPM2AB3EWF7 344 aa15.02■□□□□ -0
TMEM260-214ENST00000556975 IGLC6P0CF74 106 aa15.02■□□□□ -0
TMEM260-214ENST00000556975 RPS20P60866 119 aaKnown RBP15.02■□□□□ -0
TMEM260-214ENST00000556975 DAZAP1Q96EP5 407 aaKnown RBP15.02■□□□□ -0
TMEM260-214ENST00000556975 FAT1Q14517 4588 aa15.01□□□□□ -0.01
TMEM260-214ENST00000556975 TRBV6-8A0A0A6YYG3 113 aa15.01□□□□□ -0.01
TMEM260-214ENST00000556975 BCL2P10415 239 aa15.01□□□□□ -0.01
TMEM260-214ENST00000556975 GNG4P50150 75 aa15.01□□□□□ -0.01
TMEM260-214ENST00000556975 WFDC2Q14508 124 aa15.01□□□□□ -0.01
TMEM260-214ENST00000556975 ELOBQ15370 118 aa15.01□□□□□ -0.01
TMEM260-214ENST00000556975 RMI2Q96E14 147 aa15.01□□□□□ -0.01
TMEM260-214ENST00000556975 TMEM70Q9BUB7 260 aa15.01□□□□□ -0.01
TMEM260-214ENST00000556975 A0A087WX48 190 aa15□□□□□ -0.01
TMEM260-214ENST00000556975 OR2D3Q8NGH3 330 aa15□□□□□ -0.01
TMEM260-214ENST00000556975 AP1S3Q96PC3 154 aa15□□□□□ -0.01
TMEM260-214ENST00000556975 MED9Q9NWA0 146 aa15□□□□□ -0.01
TMEM260-214ENST00000556975 VAX2Q9UIW0 290 aa15□□□□□ -0.01
TMEM260-214ENST00000556975 KLK12Q9UKR0 248 aa15□□□□□ -0.01
TMEM260-214ENST00000556975 TRBV20OR9-2A0A075B6H5 130 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms