RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 CCL18P55774 89 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 RPS20P60866 119 aaKnown RBP7.14□□□□□ -1.27
SHMT2-224ENST00000556737 COX8CQ7Z4L0 72 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 BORCS7Q96B45 105 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 UPK3BQ9BT76 320 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 KRTAP1-5Q9BYS1 174 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 IL36BQ9NZH7 164 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 DNAH5Q8TE73 4624 aa7.14□□□□□ -1.27
SHMT2-224ENST00000556737 TRGV11A0A075B6L2 103 aa7.13□□□□□ -1.27
SHMT2-224ENST00000556737 IGHV3-16A0A0C4DH30 117 aa7.13□□□□□ -1.27
SHMT2-224ENST00000556737 IGHV3-53P01767 116 aa7.13□□□□□ -1.27
SHMT2-224ENST00000556737 S100A4P26447 101 aaKnown RBP7.13□□□□□ -1.27
SHMT2-224ENST00000556737 FHL2Q14192 279 aa7.13□□□□□ -1.27
SHMT2-224ENST00000556737 ESRGQ1W209 222 aa7.13□□□□□ -1.27
SHMT2-224ENST00000556737 C1orf134Q5TEV5 83 aa7.13□□□□□ -1.27
SHMT2-224ENST00000556737 TMEM242Q9NWH2 141 aa7.13□□□□□ -1.27
SHMT2-224ENST00000556737 C11orf21Q9P2W6 132 aa7.13□□□□□ -1.27
SHMT2-224ENST00000556737 MRPS16Q9Y3D3 137 aaKnown RBP7.13□□□□□ -1.27
SHMT2-224ENST00000556737 LRP1BQ9NZR2 4599 aa7.12□□□□□ -1.27
SHMT2-224ENST00000556737 TYMSP04818 313 aa7.12□□□□□ -1.27
SHMT2-224ENST00000556737 SSTP61278 116 aa7.12□□□□□ -1.27
SHMT2-224ENST00000556737 LINC01559Q495D7 138 aa7.12□□□□□ -1.27
SHMT2-224ENST00000556737 CT83Q5H943 113 aa7.12□□□□□ -1.27
SHMT2-224ENST00000556737 TSKUQ8WUA8 353 aa7.12□□□□□ -1.27
SHMT2-224ENST00000556737 RASL10AQ92737 203 aa7.12□□□□□ -1.27
SHMT2-224ENST00000556737 PGLYRP4Q96LB8 373 aa7.12□□□□□ -1.27
SHMT2-224ENST00000556737 NAT8BQ9UHF3 227 aa7.12□□□□□ -1.27
SHMT2-224ENST00000556737 ABCA13Q86UQ4 5058 aa7.12□□□□□ -1.27
SHMT2-224ENST00000556737 TGIF2-C20orf24A0A0A6YYL0 155 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 IGKV3D-20A0A0C4DH25 116 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 HIGD1CA8MV81 97 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 GNRH2O43555 120 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 ASIPP42127 132 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 CRYBA4P53673 196 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 C6orf223Q8N319 242 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 ZNF479Q96JC4 524 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 KCNS1Q96KK3 526 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 IMMP2LQ96T52 175 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 SPXQ9BT56 116 aa7.11□□□□□ -1.27
SHMT2-224ENST00000556737 SMIM27A0A1W2PRY6 76 aa7.1□□□□□ -1.27
SHMT2-224ENST00000556737 H3BVH4 76 aa7.1□□□□□ -1.27
SHMT2-224ENST00000556737 PAX4O43316 350 aa7.1□□□□□ -1.27
SHMT2-224ENST00000556737 TNP2Q05952 138 aa7.1□□□□□ -1.27
SHMT2-224ENST00000556737 MRPL54Q6P161 138 aaKnown RBP7.1□□□□□ -1.27
SHMT2-224ENST00000556737 FER1L6-AS1Q8NA97 138 aa7.1□□□□□ -1.27
SHMT2-224ENST00000556737 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
SHMT2-224ENST00000556737 GFRA4Q9GZZ7 299 aa7.1□□□□□ -1.27
SHMT2-224ENST00000556737 Q9H8V8 135 aa7.1□□□□□ -1.27
SHMT2-224ENST00000556737 PRO0255Q9UI72 69 aa7.1□□□□□ -1.27
SHMT2-224ENST00000556737 ICOSQ9Y6W8 199 aa7.1□□□□□ -1.27
SHMT2-224ENST00000556737 HSPG2P98160 4391 aa7.09□□□□□ -1.27
SHMT2-224ENST00000556737 TRAV4A0A0B4J268 109 aa7.09□□□□□ -1.27
SHMT2-224ENST00000556737 MUC21A0A0G2JKD1 596 aa7.09□□□□□ -1.27
SHMT2-224ENST00000556737 MUC21A0A140T8X8 626 aa7.09□□□□□ -1.27
SHMT2-224ENST00000556737 RAB4BP61018 213 aa7.09□□□□□ -1.27
SHMT2-224ENST00000556737 ELOBQ15370 118 aa7.09□□□□□ -1.27
SHMT2-224ENST00000556737 TTC32Q5I0X7 151 aa7.09□□□□□ -1.27
SHMT2-224ENST00000556737 LYZL1Q6UWQ5 148 aa7.09□□□□□ -1.27
SHMT2-224ENST00000556737 NUP35Q8NFH5 326 aa7.09□□□□□ -1.27
SHMT2-224ENST00000556737 GTSF1Q8WW33 167 aa7.09□□□□□ -1.27
SHMT2-224ENST00000556737 APOBP04114 4563 aaKnown RBP7.09□□□□□ -1.27
SHMT2-224ENST00000556737 FAM231BA6NCW3 169 aa7.08□□□□□ -1.28
SHMT2-224ENST00000556737 M0R2P5 195 aa7.08□□□□□ -1.28
SHMT2-224ENST00000556737 CXCL1P09341 107 aa7.08□□□□□ -1.28
SHMT2-224ENST00000556737 SLAQ13239 276 aa7.08□□□□□ -1.28
SHMT2-224ENST00000556737 RIGQ13278 110 aa7.08□□□□□ -1.28
SHMT2-224ENST00000556737 C9orf85Q96MD7 179 aa7.08□□□□□ -1.28
SHMT2-224ENST00000556737 HHLA3Q9XRX5 114 aa7.08□□□□□ -1.28
SHMT2-224ENST00000556737 PHLDA3Q9Y5J5 127 aa7.08□□□□□ -1.28
SHMT2-224ENST00000556737 TRAV9-1A0A075B6T8 112 aa7.07□□□□□ -1.28
SHMT2-224ENST00000556737 TRGV4A0A0C4DH28 118 aa7.07□□□□□ -1.28
SHMT2-224ENST00000556737 A0A1B0GUT8 65 aa7.07□□□□□ -1.28
SHMT2-224ENST00000556737 K7EQD1 137 aa7.07□□□□□ -1.28
SHMT2-224ENST00000556737 M0R381 172 aa7.07□□□□□ -1.28
SHMT2-224ENST00000556737 ARMS2P0C7Q2 107 aa7.07□□□□□ -1.28
SHMT2-224ENST00000556737 RNASE3P12724 160 aaKnown RBP7.07□□□□□ -1.28
SHMT2-224ENST00000556737 RPS10P46783 165 aaKnown RBP7.07□□□□□ -1.28
SHMT2-224ENST00000556737 CAMPP49913 170 aa7.07□□□□□ -1.28
SHMT2-224ENST00000556737 TWIST1Q15672 202 aa7.07□□□□□ -1.28
SHMT2-224ENST00000556737 SPANXN1Q5VSR9 72 aa7.07□□□□□ -1.28
SHMT2-224ENST00000556737 ZNF575Q86XF7 245 aa7.07□□□□□ -1.28
SHMT2-224ENST00000556737 LOC100131303A0A0U1RQF7 123 aa7.06□□□□□ -1.28
SHMT2-224ENST00000556737 COLCA2A8K830 154 aa7.06□□□□□ -1.28
SHMT2-224ENST00000556737 F2Z2F3 143 aa7.06□□□□□ -1.28
SHMT2-224ENST00000556737 NXPH4O95158 308 aa7.06□□□□□ -1.28
SHMT2-224ENST00000556737 IGLC6P0CF74 106 aa7.06□□□□□ -1.28
SHMT2-224ENST00000556737 GATA1P15976 413 aaPredicted RBP7.06□□□□□ -1.28
SHMT2-224ENST00000556737 HBBP68871 147 aa7.06□□□□□ -1.28
SHMT2-224ENST00000556737 MRPL23Q16540 153 aaKnown RBP7.06□□□□□ -1.28
SHMT2-224ENST00000556737 LYPD5Q6UWN5 251 aa7.06□□□□□ -1.28
SHMT2-224ENST00000556737 SYT8Q8NBV8 401 aa7.06□□□□□ -1.28
SHMT2-224ENST00000556737 OR4C5Q8NGB2 326 aa7.06□□□□□ -1.28
SHMT2-224ENST00000556737 FRZBQ92765 325 aa7.06□□□□□ -1.28
SHMT2-224ENST00000556737 TRBV24-1A0A075B6N3 115 aa7.05□□□□□ -1.28
SHMT2-224ENST00000556737 S100A8P05109 93 aa7.05□□□□□ -1.28
SHMT2-224ENST00000556737 GYPEP15421 78 aa7.05□□□□□ -1.28
SHMT2-224ENST00000556737 RAB5AP20339 215 aa7.05□□□□□ -1.28
SHMT2-224ENST00000556737 CTRLP40313 264 aa7.05□□□□□ -1.28
SHMT2-224ENST00000556737 CACNG7P62955 275 aa7.05□□□□□ -1.28
SHMT2-224ENST00000556737 WDR73Q6P4I2 378 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms