RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 UFSP1Q6NVU6 142 aa11.75□□□□□ -0.53
PSEN1-217ENST00000556533 SH2D6Q7Z4S9 175 aa11.75□□□□□ -0.53
PSEN1-217ENST00000556533 C14orf178Q8N769 122 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-217ENST00000556533 UPK3BQ9BT76 320 aa11.75□□□□□ -0.53
PSEN1-217ENST00000556533 GAGE12JA6NER3 117 aa11.74□□□□□ -0.53
PSEN1-217ENST00000556533 ZNF727A8MUV8 499 aa11.74□□□□□ -0.53
PSEN1-217ENST00000556533 GAGE1Q13065 139 aa11.74□□□□□ -0.53
PSEN1-217ENST00000556533 GAGE4Q13068 117 aa11.74□□□□□ -0.53
PSEN1-217ENST00000556533 GAGE5Q13069 117 aa11.74□□□□□ -0.53
PSEN1-217ENST00000556533 GAGE13Q4V321 117 aa11.74□□□□□ -0.53
PSEN1-217ENST00000556533 RPP21Q9H633 154 aaKnown RBP11.74□□□□□ -0.53
PSEN1-217ENST00000556533 PEA15Q15121 130 aa11.73□□□□□ -0.53
PSEN1-217ENST00000556533 C1orf134Q5TEV5 83 aa11.73□□□□□ -0.53
PSEN1-217ENST00000556533 Q9UF83 564 aa11.73□□□□□ -0.53
PSEN1-217ENST00000556533 DNAH10Q8IVF4 4471 aa11.72□□□□□ -0.53
PSEN1-217ENST00000556533 C9JQL5 133 aa11.72□□□□□ -0.53
PSEN1-217ENST00000556533 F5H697 171 aa11.72□□□□□ -0.53
PSEN1-217ENST00000556533 SIVA1O15304 175 aa11.72□□□□□ -0.53
PSEN1-217ENST00000556533 GATCO43716 136 aaKnown RBP11.72□□□□□ -0.53
PSEN1-217ENST00000556533 IGLC6P0CF74 106 aa11.72□□□□□ -0.53
PSEN1-217ENST00000556533 SRSF3P84103 164 aaKnown RBP11.72□□□□□ -0.53
PSEN1-217ENST00000556533 LYZL1Q6UWQ5 148 aa11.72□□□□□ -0.53
PSEN1-217ENST00000556533 NACAE9PAV3 2078 aa11.72□□□□□ -0.53
PSEN1-217ENST00000556533 NDUFS6O75380 124 aaKnown RBP11.71□□□□□ -0.53
PSEN1-217ENST00000556533 SMIM17P0DL12 118 aa11.71□□□□□ -0.53
PSEN1-217ENST00000556533 ERVFC1-1P60608 527 aa11.71□□□□□ -0.53
PSEN1-217ENST00000556533 RAB14P61106 215 aa11.71□□□□□ -0.53
PSEN1-217ENST00000556533 ZNF56Q15929 161 aa11.71□□□□□ -0.53
PSEN1-217ENST00000556533 SOHLH1Q5JUK2 328 aa11.71□□□□□ -0.53
PSEN1-217ENST00000556533 ATP6V0E2Q8NHE4 81 aa11.71□□□□□ -0.53
PSEN1-217ENST00000556533 MSRB1Q9NZV6 116 aa11.71□□□□□ -0.53
PSEN1-217ENST00000556533 F2Z2F3 143 aa11.7□□□□□ -0.54
PSEN1-217ENST00000556533 RTL8CO15255 209 aa11.7□□□□□ -0.54
PSEN1-217ENST00000556533 CACNG7P62955 275 aa11.7□□□□□ -0.54
PSEN1-217ENST00000556533 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
PSEN1-217ENST00000556533 LY96Q9Y6Y9 160 aa11.7□□□□□ -0.54
PSEN1-217ENST00000556533 A0A1W2PPQ1 181 aa11.69□□□□□ -0.54
PSEN1-217ENST00000556533 RAB4BP61018 213 aa11.69□□□□□ -0.54
PSEN1-217ENST00000556533 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
PSEN1-217ENST00000556533 LINC01551Q86U37 167 aa11.69□□□□□ -0.54
PSEN1-217ENST00000556533 WFDC10BQ8IUB3 73 aa11.69□□□□□ -0.54
PSEN1-217ENST00000556533 AP1S3Q96PC3 154 aa11.69□□□□□ -0.54
PSEN1-217ENST00000556533 OR10J3Q5JRS4 329 aa11.68□□□□□ -0.54
PSEN1-217ENST00000556533 LINC00336Q6ZUF6 198 aa11.68□□□□□ -0.54
PSEN1-217ENST00000556533 FAM231DQ6ZW35 169 aa11.68□□□□□ -0.54
PSEN1-217ENST00000556533 C6orf223Q8N319 242 aa11.68□□□□□ -0.54
PSEN1-217ENST00000556533 KRTAP1-5Q9BYS1 174 aa11.68□□□□□ -0.54
PSEN1-217ENST00000556533 GTSF1LQ9H1H1 148 aa11.68□□□□□ -0.54
PSEN1-217ENST00000556533 EPPK1P58107 5090 aaKnown RBP11.68□□□□□ -0.54
PSEN1-217ENST00000556533 TRAV8-6A0A0B4J262 113 aa11.67□□□□□ -0.54
PSEN1-217ENST00000556533 PRSS29PA6NIE9 313 aa11.67□□□□□ -0.54
PSEN1-217ENST00000556533 MGPP08493 103 aa11.67□□□□□ -0.54
PSEN1-217ENST00000556533 NTF3P20783 257 aa11.67□□□□□ -0.54
PSEN1-217ENST00000556533 TIRAPP58753 221 aa11.67□□□□□ -0.54
PSEN1-217ENST00000556533 FAM74A3Q4VXF1 159 aa11.67□□□□□ -0.54
PSEN1-217ENST00000556533 A8MWL6 223 aa11.66□□□□□ -0.54
PSEN1-217ENST00000556533 TWIST1Q15672 202 aa11.66□□□□□ -0.54
PSEN1-217ENST00000556533 GTSF1Q8WW33 167 aa11.66□□□□□ -0.54
PSEN1-217ENST00000556533 KIF25-AS1Q9Y6Z4 181 aa11.66□□□□□ -0.54
PSEN1-217ENST00000556533 DNAH2Q9P225 4427 aa11.66□□□□□ -0.54
PSEN1-217ENST00000556533 TRAV9-2A0A087WT02 112 aa11.65□□□□□ -0.54
PSEN1-217ENST00000556533 EVI2AP22794 236 aa11.65□□□□□ -0.54
PSEN1-217ENST00000556533 CTRLP40313 264 aa11.65□□□□□ -0.54
PSEN1-217ENST00000556533 RPL36AP83881 106 aaKnown RBP11.65□□□□□ -0.54
PSEN1-217ENST00000556533 ADIRFQ15847 76 aa11.65□□□□□ -0.54
PSEN1-217ENST00000556533 RPL36ALQ969Q0 106 aaKnown RBP11.65□□□□□ -0.54
PSEN1-217ENST00000556533 PGLYRP4Q96LB8 373 aa11.65□□□□□ -0.54
PSEN1-217ENST00000556533 SMDT1Q9H4I9 107 aa11.65□□□□□ -0.54
PSEN1-217ENST00000556533 TRBV10-1A0A0K0K1A3 114 aa11.64□□□□□ -0.55
PSEN1-217ENST00000556533 TRGC1P0CF51 173 aa11.64□□□□□ -0.55
PSEN1-217ENST00000556533 LINC00694P0DN24 101 aa11.64□□□□□ -0.55
PSEN1-217ENST00000556533 RPL23P62829 140 aaKnown RBP11.64□□□□□ -0.55
PSEN1-217ENST00000556533 LELP1Q5T871 98 aa11.64□□□□□ -0.55
PSEN1-217ENST00000556533 WDR73Q6P4I2 378 aa11.64□□□□□ -0.55
PSEN1-217ENST00000556533 C15orf54Q8N8G6 183 aa11.64□□□□□ -0.55
PSEN1-217ENST00000556533 NAT8Q9UHE5 227 aa11.64□□□□□ -0.55
PSEN1-217ENST00000556533 LINC00315P59091 139 aa11.63□□□□□ -0.55
PSEN1-217ENST00000556533 OSTCQ9NRP0 149 aa11.63□□□□□ -0.55
PSEN1-217ENST00000556533 TRBV7-3A0A075B6L6 115 aa11.62□□□□□ -0.55
PSEN1-217ENST00000556533 IGHV3-38A0A0C4DH36 116 aa11.62□□□□□ -0.55
PSEN1-217ENST00000556533 DNAH10OSP0CZ25 163 aa11.62□□□□□ -0.55
PSEN1-217ENST00000556533 NEXN-AS1Q8NBZ9 246 aa11.62□□□□□ -0.55
PSEN1-217ENST00000556533 ISOC2Q96AB3 205 aa11.62□□□□□ -0.55
PSEN1-217ENST00000556533 TNFRSF18Q9Y5U5 241 aa11.62□□□□□ -0.55
PSEN1-217ENST00000556533 A0A087WWC5 75 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 IGHV3-30P01768 117 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 IGHV3-33P01772 117 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 IGHV3-30-3P0DP02 117 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 IGHV3-30-5P0DP03 117 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 UBE2D3P61077 147 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 UBE2D2P62837 147 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 IFITM2Q01629 132 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 CT83Q5H943 113 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 OR10G8Q8NGN5 311 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 TSKUQ8WUA8 353 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 BORCS7Q96B45 105 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 DPH3P1Q9H4G8 78 aa11.61□□□□□ -0.55
PSEN1-217ENST00000556533 DNAH17Q9UFH2 4485 aa11.6□□□□□ -0.55
PSEN1-217ENST00000556533 CLLU1Q5K131 121 aa11.6□□□□□ -0.55
PSEN1-217ENST00000556533 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms