RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 MED13LQ71F56 2210 aa-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 F2Z2F3 143 aa-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 IGLC6P0CF74 106 aa-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 SSBP1Q04837 148 aaKnown RBP-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 Q5BKY6 102 aa-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 LINC01545Q5VT33 79 aa-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 CYP2G1PQ6ZSU1 146 aa-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 Q96NJ1 140 aa-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 AHCTF1Q8WYP5 2266 aa-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 MYO7AQ13402 2215 aa-0.05□□□□□ -2.42
SCFD1-218ENST00000556256 ABCA12Q86UK0 2595 aa-0.06□□□□□ -2.42
SCFD1-218ENST00000556256 TSPAN19P0C672 248 aa-0.06□□□□□ -2.42
SCFD1-218ENST00000556256 HIST1H1AQ02539 215 aaPredicted RBP-0.06□□□□□ -2.42
SCFD1-218ENST00000556256 OVOS2A0A0J9YW53 1432 aa-0.06□□□□□ -2.42
SCFD1-218ENST00000556256 OVOS2Q6IE36 1432 aa-0.06□□□□□ -2.42
SCFD1-218ENST00000556256 VIRMAQ69YN4 1812 aaKnown RBP-0.06□□□□□ -2.42
SCFD1-218ENST00000556256 SSC5DA1L4H1 1573 aa-0.06□□□□□ -2.42
SCFD1-218ENST00000556256 TNS1Q9HBL0 1735 aaKnown RBP-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 TRAV12-3A0A0B4J271 114 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 FAM236AA0A1B0GUQ0 79 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 FAM236BA0A1B0GV22 79 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 NCS1P62166 190 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 C20orf197Q8N268 126 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 MMGT1Q8N4V1 131 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 SMIM11BQ8TCY0 68 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 COX7B2Q8TF08 81 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 SAR1AQ9NR31 198 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 NDUFA12Q9UI09 145 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 PIEZO1Q92508 2521 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 LAMC3Q9Y6N6 1575 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 CACNA1CQ13936 2221 aa-0.07□□□□□ -2.42
SCFD1-218ENST00000556256 JMJD1CQ15652 2540 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 ARPC5O15511 151 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 PITX3O75364 302 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 SPINK1P00995 79 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 COX4I1P13073 169 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 SPCS2Q15005 226 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 C4orf33Q8N1A6 199 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 CADP27708 2225 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 UNC13BO14795 1591 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 CELSR2Q9HCU4 2923 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 WNK2Q9Y3S1 2297 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 POLQO75417 2590 aa-0.08□□□□□ -2.42
SCFD1-218ENST00000556256 DISP2A7MBM2 1401 aa-0.09□□□□□ -2.42
SCFD1-218ENST00000556256 PRG4Q92954 1404 aaPredicted RBP-0.09□□□□□ -2.42
SCFD1-218ENST00000556256 LINC00694P0DN24 101 aa-0.09□□□□□ -2.42
SCFD1-218ENST00000556256 CKS1BP61024 79 aa-0.09□□□□□ -2.42
SCFD1-218ENST00000556256 MIC13Q5XKP0 118 aa-0.09□□□□□ -2.42
SCFD1-218ENST00000556256 VSTM2AQ8TAG5 236 aa-0.09□□□□□ -2.42
SCFD1-218ENST00000556256 TMEM242Q9NWH2 141 aa-0.09□□□□□ -2.42
SCFD1-218ENST00000556256 ARHGEF10O15013 1369 aa-0.09□□□□□ -2.42
SCFD1-218ENST00000556256 HMCN2Q8NDA2 5059 aa-0.1□□□□□ -2.42
SCFD1-218ENST00000556256 ADGRB1O14514 1584 aa-0.1□□□□□ -2.42
SCFD1-218ENST00000556256 F5P12259 2224 aa-0.1□□□□□ -2.43
SCFD1-218ENST00000556256 M0R129 80 aa-0.1□□□□□ -2.43
SCFD1-218ENST00000556256 NCR2O95944 276 aa-0.1□□□□□ -2.43
SCFD1-218ENST00000556256 NMBP08949 121 aa-0.1□□□□□ -2.43
SCFD1-218ENST00000556256 COX6A2Q02221 97 aa-0.1□□□□□ -2.43
SCFD1-218ENST00000556256 SLC48A1Q6P1K1 146 aa-0.1□□□□□ -2.43
SCFD1-218ENST00000556256 NSD1Q96L73 2696 aaPredicted RBP-0.1□□□□□ -2.43
SCFD1-218ENST00000556256 UNC79Q9P2D8 2635 aa-0.1□□□□□ -2.43
SCFD1-218ENST00000556256 DOCK11Q5JSL3 2073 aa-0.1□□□□□ -2.43
SCFD1-218ENST00000556256 KIF13AQ9H1H9 1805 aa-0.1□□□□□ -2.43
SCFD1-218ENST00000556256 PLXNA1Q9UIW2 1896 aa-0.11□□□□□ -2.43
SCFD1-218ENST00000556256 TRBV7-1A0A0A6YYK4 115 aa-0.11□□□□□ -2.43
SCFD1-218ENST00000556256 CLPSL1A2RUU4 121 aa-0.11□□□□□ -2.43
SCFD1-218ENST00000556256 APODP05090 189 aa-0.11□□□□□ -2.43
SCFD1-218ENST00000556256 PIRTP0C851 137 aa-0.11□□□□□ -2.43
SCFD1-218ENST00000556256 C9orf116Q5BN46 136 aaPredicted RBP-0.11□□□□□ -2.43
SCFD1-218ENST00000556256 FAM74A4Q5TZK3 123 aa-0.11□□□□□ -2.43
SCFD1-218ENST00000556256 SPANXN1Q5VSR9 72 aa-0.11□□□□□ -2.43
SCFD1-218ENST00000556256 V9GYV3 84 aa-0.11□□□□□ -2.43
SCFD1-218ENST00000556256 HIVEP3Q5T1R4 2406 aa-0.11□□□□□ -2.43
SCFD1-218ENST00000556256 Q6ZRX8 168 aa-0.12□□□□□ -2.43
SCFD1-218ENST00000556256 CTAGE3PQ8IX95 158 aa-0.12□□□□□ -2.43
SCFD1-218ENST00000556256 SMIM3Q9BZL3 60 aa-0.12□□□□□ -2.43
SCFD1-218ENST00000556256 BATF3Q9NR55 127 aa-0.12□□□□□ -2.43
SCFD1-218ENST00000556256 GSKIPQ9P0R6 139 aa-0.12□□□□□ -2.43
SCFD1-218ENST00000556256 CHD9Q3L8U1 2897 aa-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 LAMB1P07942 1786 aa-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 IBTKQ9P2D0 1353 aaPredicted RBP-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 TRGV1A0A0A0MS02 117 aa-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 TMEM14DPA8MWL7 114 aa-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 UBE2D1P51668 147 aa-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 INSL4Q14641 139 aa-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 ALX1Q15699 326 aa-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 Q6ZUT4 128 aa-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 C10orf82Q8WW14 230 aa-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 ABCA2Q9BZC7 2435 aa-0.13□□□□□ -2.43
SCFD1-218ENST00000556256 MUC22E2RYF6 1773 aaPredicted RBP-0.14□□□□□ -2.43
SCFD1-218ENST00000556256 TMEM2Q9UHN6 1383 aa-0.14□□□□□ -2.43
SCFD1-218ENST00000556256 PHIPQ8WWQ0 1821 aa-0.14□□□□□ -2.43
SCFD1-218ENST00000556256 LOC105371267A0A1B0GV96 52 aa-0.14□□□□□ -2.43
SCFD1-218ENST00000556256 M0R2Z0 102 aa-0.14□□□□□ -2.43
SCFD1-218ENST00000556256 ACYP2P14621 99 aa-0.14□□□□□ -2.43
SCFD1-218ENST00000556256 EDDM3BP56851 147 aa-0.14□□□□□ -2.43
SCFD1-218ENST00000556256 NCOR1O75376 2440 aa-0.14□□□□□ -2.43
SCFD1-218ENST00000556256 NRXN2Q9P2S2 1712 aa-0.15□□□□□ -2.43
SCFD1-218ENST00000556256 J3QR89 54 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms