RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 IBA57-AS1B1ANH7 110 aa16.46■□□□□ 0.23
PRKCH-216ENST00000555542 ZFP82Q8N141 532 aa16.46■□□□□ 0.23
PRKCH-216ENST00000555542 C14orf178Q8N769 122 aaPredicted RBP16.46■□□□□ 0.23
PRKCH-216ENST00000555542 HSPG2P98160 4391 aa16.46■□□□□ 0.23
PRKCH-216ENST00000555542 A0A087WWL8 130 aa16.45■□□□□ 0.22
PRKCH-216ENST00000555542 UFSP1Q6NVU6 142 aa16.45■□□□□ 0.22
PRKCH-216ENST00000555542 BAGE2Q86Y30 109 aa16.44■□□□□ 0.22
PRKCH-216ENST00000555542 SFRP2Q96HF1 295 aa16.44■□□□□ 0.22
PRKCH-216ENST00000555542 SCRT2Q9NQ03 307 aa16.43■□□□□ 0.22
PRKCH-216ENST00000555542 LINC00694P0DN24 101 aa16.42■□□□□ 0.22
PRKCH-216ENST00000555542 Q8N1X5 172 aa16.42■□□□□ 0.22
PRKCH-216ENST00000555542 A0A087WWC5 75 aa16.41■□□□□ 0.22
PRKCH-216ENST00000555542 RPL19P84098 196 aaKnown RBP16.41■□□□□ 0.22
PRKCH-216ENST00000555542 PRR27Q6MZM9 219 aa16.41■□□□□ 0.22
PRKCH-216ENST00000555542 GNG13Q9P2W3 67 aa16.41■□□□□ 0.22
PRKCH-216ENST00000555542 Q9UF83 564 aa16.41■□□□□ 0.22
PRKCH-216ENST00000555542 EIF5AL1Q6IS14 154 aaKnown RBP16.4■□□□□ 0.22
PRKCH-216ENST00000555542 MANBALQ9NQG1 85 aa16.4■□□□□ 0.22
PRKCH-216ENST00000555542 LAGE3Q14657 143 aa16.39■□□□□ 0.21
PRKCH-216ENST00000555542 URGCP-MRPS24S4R325 110 aa16.39■□□□□ 0.21
PRKCH-216ENST00000555542 DNAH5Q8TE73 4624 aa16.39■□□□□ 0.21
PRKCH-216ENST00000555542 TEX46H3BTG2 121 aa16.38■□□□□ 0.21
PRKCH-216ENST00000555542 Q8N3U1 123 aa16.38■□□□□ 0.21
PRKCH-216ENST00000555542 ABCA13Q86UQ4 5058 aa16.37■□□□□ 0.21
PRKCH-216ENST00000555542 RPL35P42766 123 aaKnown RBP16.37■□□□□ 0.21
PRKCH-216ENST00000555542 RAB5CP51148 216 aa16.37■□□□□ 0.21
PRKCH-216ENST00000555542 MLST8Q9BVC4 326 aa16.37■□□□□ 0.21
PRKCH-216ENST00000555542 TM2D2Q9BX73 214 aa16.37■□□□□ 0.21
PRKCH-216ENST00000555542 IGLV5-52A0A0A0MRZ9 124 aa16.36■□□□□ 0.21
PRKCH-216ENST00000555542 GCSHP23434 173 aa16.36■□□□□ 0.21
PRKCH-216ENST00000555542 RPL36AP83881 106 aaKnown RBP16.36■□□□□ 0.21
PRKCH-216ENST00000555542 OR10AG1Q8NH19 301 aa16.36■□□□□ 0.21
PRKCH-216ENST00000555542 RPL36ALQ969Q0 106 aaKnown RBP16.36■□□□□ 0.21
PRKCH-216ENST00000555542 APOBP04114 4563 aaKnown RBP16.35■□□□□ 0.21
PRKCH-216ENST00000555542 LRCOL1A6NCL2 159 aa16.35■□□□□ 0.21
PRKCH-216ENST00000555542 CXCL1P09341 107 aa16.35■□□□□ 0.21
PRKCH-216ENST00000555542 KRTAP10-1P60331 282 aa16.35■□□□□ 0.21
PRKCH-216ENST00000555542 CCL20P78556 96 aa16.35■□□□□ 0.21
PRKCH-216ENST00000555542 ZNF56Q15929 161 aa16.35■□□□□ 0.21
PRKCH-216ENST00000555542 TOR2AQ5JU69 321 aa16.35■□□□□ 0.21
PRKCH-216ENST00000555542 SPANXN1Q5VSR9 72 aa16.35■□□□□ 0.21
PRKCH-216ENST00000555542 DAZ4Q86SG3 579 aaKnown RBP16.35■□□□□ 0.21
PRKCH-216ENST00000555542 DAZ3Q9NR90 486 aaKnown RBP16.35■□□□□ 0.21
PRKCH-216ENST00000555542 TRAV8-3A0A0A6YYJ7 113 aa16.34■□□□□ 0.21
PRKCH-216ENST00000555542 TRBV10-1A0A0K0K1A3 114 aa16.34■□□□□ 0.21
PRKCH-216ENST00000555542 MUC21A0A0G2JKD1 596 aa16.33■□□□□ 0.2
PRKCH-216ENST00000555542 MUC21A0A140T8X8 626 aa16.33■□□□□ 0.2
PRKCH-216ENST00000555542 SSTP61278 116 aa16.33■□□□□ 0.2
PRKCH-216ENST00000555542 KCNIP4Q6PIL6 250 aa16.33■□□□□ 0.2
PRKCH-216ENST00000555542 NTN5Q8WTR8 489 aaPredicted RBP16.33■□□□□ 0.2
PRKCH-216ENST00000555542 DERL1Q9BUN8 251 aa16.33■□□□□ 0.2
PRKCH-216ENST00000555542 TRAV1-1A0A0B4J248 108 aa16.32■□□□□ 0.2
PRKCH-216ENST00000555542 RAB4BP61018 213 aa16.32■□□□□ 0.2
PRKCH-216ENST00000555542 TCTE3Q8IZS6 198 aa16.32■□□□□ 0.2
PRKCH-216ENST00000555542 Q8N814 137 aa16.32■□□□□ 0.2
PRKCH-216ENST00000555542 TRBV7-3A0A075B6L6 115 aa16.31■□□□□ 0.2
PRKCH-216ENST00000555542 CENPWQ5EE01 88 aa16.31■□□□□ 0.2
PRKCH-216ENST00000555542 C11orf52Q96A22 123 aa16.31■□□□□ 0.2
PRKCH-216ENST00000555542 F5H697 171 aa16.3■□□□□ 0.2
PRKCH-216ENST00000555542 SNAI2O43623 268 aa16.3■□□□□ 0.2
PRKCH-216ENST00000555542 IFNA1P01562 189 aa16.3■□□□□ 0.2
PRKCH-216ENST00000555542 OR5AL1P0C617 328 aa16.3■□□□□ 0.2
PRKCH-216ENST00000555542 SULT1A2P50226 295 aa16.3■□□□□ 0.2
PRKCH-216ENST00000555542 DAZAP1Q96EP5 407 aaKnown RBP16.3■□□□□ 0.2
PRKCH-216ENST00000555542 A0A087WX48 190 aa16.29■□□□□ 0.2
PRKCH-216ENST00000555542 EPM2AB3EWF7 344 aa16.29■□□□□ 0.2
PRKCH-216ENST00000555542 SMIM17P0DL12 118 aa16.29■□□□□ 0.2
PRKCH-216ENST00000555542 UBE2D3P61077 147 aa16.29■□□□□ 0.2
PRKCH-216ENST00000555542 UBE2D2P62837 147 aa16.29■□□□□ 0.2
PRKCH-216ENST00000555542 NIT1Q86X76 327 aa16.29■□□□□ 0.2
PRKCH-216ENST00000555542 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.29■□□□□ 0.2
PRKCH-216ENST00000555542 XGP55808 180 aa16.28■□□□□ 0.2
PRKCH-216ENST00000555542 RMI2Q96E14 147 aa16.28■□□□□ 0.2
PRKCH-216ENST00000555542 TPPP3Q9BW30 176 aa16.28■□□□□ 0.2
PRKCH-216ENST00000555542 SSBP4Q9BWG4 385 aaPredicted RBP16.28■□□□□ 0.2
PRKCH-216ENST00000555542 GNG4P50150 75 aa16.27■□□□□ 0.2
PRKCH-216ENST00000555542 MEF2BQ02080 365 aaPredicted RBP16.27■□□□□ 0.2
PRKCH-216ENST00000555542 SLC51BQ86UW2 128 aa16.27■□□□□ 0.2
PRKCH-216ENST00000555542 KLK12Q9UKR0 248 aa16.27■□□□□ 0.2
PRKCH-216ENST00000555542 PDE6DO43924 150 aa16.26■□□□□ 0.19
PRKCH-216ENST00000555542 OR10G8Q8NGN5 311 aa16.26■□□□□ 0.19
PRKCH-216ENST00000555542 AP1S3Q96PC3 154 aa16.26■□□□□ 0.19
PRKCH-216ENST00000555542 COX11Q9Y6N1 276 aa16.26■□□□□ 0.19
PRKCH-216ENST00000555542 RAB19A4D1S5 217 aa16.25■□□□□ 0.19
PRKCH-216ENST00000555542 TMEM262E9PQX1 116 aa16.25■□□□□ 0.19
PRKCH-216ENST00000555542 LECT2O14960 151 aa16.25■□□□□ 0.19
PRKCH-216ENST00000555542 C1QBP02746 253 aa16.25■□□□□ 0.19
PRKCH-216ENST00000555542 ELOBQ15370 118 aa16.25■□□□□ 0.19
PRKCH-216ENST00000555542 NEXN-AS1Q8NBZ9 246 aa16.25■□□□□ 0.19
PRKCH-216ENST00000555542 OR2D3Q8NGH3 330 aa16.25■□□□□ 0.19
PRKCH-216ENST00000555542 MED9Q9NWA0 146 aa16.25■□□□□ 0.19
PRKCH-216ENST00000555542 IGKV2D-24A0A075B6R9 120 aa16.24■□□□□ 0.19
PRKCH-216ENST00000555542 GZMBP10144 247 aa16.24■□□□□ 0.19
PRKCH-216ENST00000555542 RPS20P60866 119 aaKnown RBP16.24■□□□□ 0.19
PRKCH-216ENST00000555542 CHCHD7Q9BUK0 85 aa16.24■□□□□ 0.19
PRKCH-216ENST00000555542 FER1L6-AS1Q8NA97 138 aa16.23■□□□□ 0.19
PRKCH-216ENST00000555542 FRZBQ92765 325 aa16.23■□□□□ 0.19
PRKCH-216ENST00000555542 UBE2WQ96B02 151 aa16.23■□□□□ 0.19
PRKCH-216ENST00000555542 SMIM12Q96EX1 92 aa16.23■□□□□ 0.19
PRKCH-216ENST00000555542 TRBV6-8A0A0A6YYG3 113 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms